Conservation of cofitness between PP_4722 and PP_0247 in Pseudomonas putida KT2440

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4722 Transcription elongation factor GreA 1.0 PP_0247 Osmolarity sensor protein EnvZ 0.40 17
Pseudomonas fluorescens FW300-N2E2 0.89 Pf6N2E2_3363 Transcription elongation factor GreA 0.89 Pf6N2E2_3904 Osmolarity sensory histidine kinase EnvZ — —
Pseudomonas fluorescens FW300-N2C3 0.87 AO356_07475 transcription elongation factor GreA 0.90 AO356_10165 ATPase — —
Pseudomonas sp. RS175 0.85 PFR28_00078 Transcription elongation factor GreA 0.89 PFR28_04869 Osmolarity sensor protein EnvZ — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.82 Psyr_4190 transcription elongation factor GreA 0.90 Psyr_0259 Osmolarity sensor protein envZ — —
Pseudomonas syringae pv. syringae B728a 0.82 Psyr_4190 transcription elongation factor GreA 0.90 Psyr_0259 Osmolarity sensor protein envZ — —
Pseudomonas sp. S08-1 0.81 OH686_17085 Transcription elongation factor GreA 0.82 OH686_11090 Osmolarity sensory histidine kinase EnvZ 0.64 7
Pseudomonas fluorescens SBW25-INTG 0.80 PFLU_RS25875 transcription elongation factor GreA 0.87 PFLU_RS01285 HAMP domain-containing protein low > 109
Pseudomonas fluorescens SBW25 0.80 PFLU_RS25875 transcription elongation factor GreA 0.87 PFLU_RS01285 HAMP domain-containing protein low > 109
Pseudomonas fluorescens FW300-N1B4 0.80 Pf1N1B4_1171 Transcription elongation factor GreA 0.91 Pf1N1B4_1773 Osmolarity sensory histidine kinase EnvZ — —
Pseudomonas fluorescens FW300-N2E3 0.80 AO353_05625 transcription elongation factor GreA 0.91 AO353_11750 ATPase low > 101
Pseudomonas fluorescens GW456-L13 0.79 PfGW456L13_5098 Transcription elongation factor GreA 0.88 PfGW456L13_426 Osmolarity sensory histidine kinase EnvZ — —
Pseudomonas simiae WCS417 0.79 PS417_24035 transcription elongation factor GreA 0.88 PS417_01175 ATPase — —
Pseudomonas stutzeri RCH2 0.77 Psest_0969 transcription elongation factor GreA 0.79 Psest_3994 Signal transduction histidine kinase low > 67
Shewanella loihica PV-4 0.61 Shew_2837 transcription elongation factor GreA (RefSeq) 0.26 Shew_3638 envZ osmolarity sensor protein (RefSeq) low > 60
Shewanella sp. ANA-3 0.61 Shewana3_1017 transcription elongation factor GreA (RefSeq) 0.27 Shewana3_4018 envZ osmolarity sensor protein (RefSeq) low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF2922 Transcription elongation factor GreA 0.24 GFF614 Osmolarity sensory histidine kinase EnvZ low > 78
Escherichia coli BW25113 0.60 b3181 greA transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) 0.24 b3404 envZ osmolarity sensor protein (NCBI) low > 76
Escherichia coli ECOR38 0.60 HEPCGN_16920 greA transcription elongation factor GreA 0.23 HEPCGN_15850 envZ two-component system sensor histidine kinase EnvZ — —
Escherichia coli ECRC101 0.60 OKFHMN_18045 greA transcription elongation factor GreA 0.24 OKFHMN_17040 envZ two-component system sensor histidine kinase EnvZ — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_00519 Transcription elongation factor GreA 0.24 OHPLBJKB_00299 Osmolarity sensor protein EnvZ low > 73
Escherichia coli Nissle 1917 0.60 ECOLIN_RS18320 transcription elongation factor GreA 0.23 ECOLIN_RS19450 two-component system sensor histidine kinase EnvZ — —
Escherichia coli ECRC102 0.60 NIAGMN_15805 greA transcription elongation factor GreA 0.24 NIAGMN_14810 envZ two-component system sensor histidine kinase EnvZ — —
Escherichia coli BL21 0.60 ECD_03046 transcript cleavage factor 0.24 ECD_03256 sensory histidine kinase in two-component regulatory system with OmpR low > 60
Escherichia coli ECRC99 0.60 KEDOAH_10105 greA transcription elongation factor GreA 0.24 KEDOAH_11100 envZ two-component system sensor histidine kinase EnvZ — —
Escherichia fergusonii Becca 0.60 EFB2_00642 Transcription elongation factor GreA 0.23 EFB2_00424 Osmolarity sensor protein EnvZ low > 86
Escherichia coli ECRC98 0.60 JDDGAC_21670 greA transcription elongation factor GreA 0.24 JDDGAC_20670 envZ two-component system sensor histidine kinase EnvZ — —
Escherichia coli ECRC62 0.60 BNILDI_01690 greA transcription elongation factor GreA 0.24 BNILDI_02690 envZ two-component system sensor histidine kinase EnvZ — —
Escherichia coli ECOR27 0.60 NOLOHH_09845 greA transcription elongation factor GreA 0.24 NOLOHH_08830 envZ two-component system sensor histidine kinase EnvZ — —
Escherichia coli ECRC101 0.60 MCAODC_08565 greA transcription elongation factor GreA 0.24 MCAODC_07570 envZ two-component system sensor histidine kinase EnvZ — —
Shewanella oneidensis MR-1 0.60 SO1191 greA transcription elongation factor GreA (NCBI ptt file) 0.27 SO4634 envZ osmolarity sensor protein EnvZ (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.60 MIT1002_01468 Transcript cleavage factor GreA 0.26 MIT1002_03969 Osmolarity sensor protein EnvZ 0.95 7
Enterobacter sp. TBS_079 0.59 MPMX20_04085 Transcription elongation factor GreA 0.23 MPMX20_04291 Osmolarity sensor protein EnvZ low > 85
Shewanella amazonensis SB2B 0.59 Sama_0951 GreA/GreB family elongation factor (RefSeq) 0.25 Sama_3511 envZ osmolarity sensor protein (RefSeq) low > 62
Klebsiella michiganensis M5al 0.59 BWI76_RS25160 transcription elongation factor GreA 0.24 BWI76_RS26670 two-component sensor histidine kinase low > 92
Enterobacter asburiae PDN3 0.59 EX28DRAFT_3232 transcription elongation factor GreA 0.23 EX28DRAFT_4139 Signal transduction histidine kinase low > 76
Pantoea sp. MT58 0.58 IAI47_17080 transcription elongation factor GreA 0.23 IAI47_01825 two-component system sensor histidine kinase EnvZ low > 76
Pectobacterium carotovorum WPP14 0.57 HER17_RS18330 transcription elongation factor GreA 0.22 HER17_RS01705 two-component system sensor histidine kinase EnvZ — —
Dickeya dadantii 3937 0.57 DDA3937_RS03015 transcription elongation factor GreA 0.23 DDA3937_RS19615 two-component system sensor histidine kinase EnvZ — —
Dickeya dianthicola ME23 0.57 DZA65_RS03180 transcription elongation factor GreA 0.23 DZA65_RS20835 two-component system sensor histidine kinase EnvZ low > 75
Dickeya dianthicola 67-19 0.57 HGI48_RS03185 transcription elongation factor GreA 0.23 HGI48_RS19745 two-component system sensor histidine kinase EnvZ low > 71
Serratia liquefaciens MT49 0.56 IAI46_01880 transcription elongation factor GreA 0.22 IAI46_23785 two-component system sensor histidine kinase EnvZ low > 86
Acinetobacter radioresistens SK82 0.56 MPMX26_00765 Transcription elongation factor GreA 0.28 MPMX26_02839 Osmolarity sensor protein EnvZ low > 36
Rahnella sp. WP5 0.56 EX31_RS08595 transcription elongation factor GreA 0.23 EX31_RS04795 two-component system sensor histidine kinase EnvZ low > 89
Erwinia tracheiphila SCR3 0.54 LU632_RS21165 greA transcription elongation factor GreA 0.21 LU632_RS22935 envZ two-component system sensor histidine kinase EnvZ low > 74
Dechlorosoma suillum PS 0.49 Dsui_3063 transcription elongation factor GreA 0.20 Dsui_2400 signal transduction histidine kinase low > 51
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS04785 transcription elongation factor GreA 0.19 QEN71_RS25990 ATP-binding protein low > 153
Paraburkholderia graminis OAS925 0.46 ABIE53_003003 transcription elongation factor GreA 0.24 ABIE53_004378 two-component system osmolarity sensor histidine kinase EnvZ low > 113
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_04404 GreA/GreB family elongation factor 0.19 H281DRAFT_01391 two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ low > 103

Not shown: 48 genomes with orthologs for PP_4722 only; 0 genomes with orthologs for PP_0247 only