Conservation of cofitness between PP_2029 and PP_0066 in Pseudomonas putida KT2440

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2029 von Willebrand factor type A domain protein 1.0 PP_0066 Ribosomal RNA small subunit methyltransferase B 0.44 10
Pseudomonas simiae WCS417 0.74 PS417_15100 BatB protein 0.83 PS417_00085 16S rRNA methyltransferase low > 88
Pseudomonas fluorescens FW300-N2E2 0.73 Pf6N2E2_622 BatA (Bacteroides aerotolerance operon) 0.84 Pf6N2E2_4121 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) low > 103
Pseudomonas fluorescens SBW25 0.73 PFLU_RS17120 VWA domain-containing protein 0.83 PFLU_RS00080 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 109
Pseudomonas fluorescens SBW25-INTG 0.73 PFLU_RS17120 VWA domain-containing protein 0.83 PFLU_RS00080 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 109
Pseudomonas sp. RS175 0.71 PFR28_01592 hypothetical protein 0.83 PFR28_04663 Ribosomal RNA small subunit methyltransferase B low > 88
Pseudomonas fluorescens GW456-L13 0.71 PfGW456L13_3303 BatA (Bacteroides aerotolerance operon) 0.83 PfGW456L13_652 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) low > 87
Pseudomonas fluorescens FW300-N1B4 0.71 Pf1N1B4_4637 BatA (Bacteroides aerotolerance operon) 0.83 Pf1N1B4_1914 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) — —
Pseudomonas fluorescens FW300-N2E3 0.70 AO353_23720 BatB protein 0.83 AO353_10630 16S rRNA methyltransferase 0.38 28
Pseudomonas fluorescens FW300-N2C3 0.70 AO356_24650 BatB protein 0.84 AO356_11275 16S rRNA methyltransferase low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_1718 von Willebrand factor, type A 0.82 Psyr_0017 16S rRNA m(5)C-967 methyltransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_1718 von Willebrand factor, type A 0.82 Psyr_0017 16S rRNA m(5)C-967 methyltransferase low > 86
Pseudomonas stutzeri RCH2 0.65 Psest_1940 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain 0.80 Psest_0021 ribosomal RNA small subunit methyltransferase RsmB low > 67
Pseudomonas sp. S08-1 0.58 OH686_22240 Aerotolerance protein BatA 0.73 OH686_12525 16S rRNA (cytosine(967)-C(5))-methyltransferase low > 80
Alteromonas macleodii MIT1002 0.39 MIT1002_01282 VWFA-related Acidobacterial domain protein 0.36 MIT1002_00018 Ribosomal RNA small subunit methyltransferase B low > 70
Kangiella aquimarina DSM 16071 0.38 B158DRAFT_1003 Mg-chelatase subunit ChlD 0.38 B158DRAFT_0396 ribosomal RNA small subunit methyltransferase RsmB low > 40
Shewanella sp. ANA-3 0.37 Shewana3_1456 von Willebrand factor, type A (RefSeq) 0.41 Shewana3_0033 sun protein (RefSeq) 0.56 20
Shewanella oneidensis MR-1 0.37 SO3093 von Willebrand factor type A domain protein (NCBI ptt file) 0.40 SO0030 sun sun protein (NCBI ptt file) low > 76
Marinobacter adhaerens HP15 0.36 HP15_2273 von Willebrand factor type A domain protein 0.42 HP15_3742 Fmu, rRNA SAM-dependent methyltransferase low > 73
Shewanella amazonensis SB2B 0.35 Sama_2172 von Willebrand factor type A domain-containing protein (RefSeq) 0.41 Sama_0041 sun protein (RefSeq) 0.46 30
Vibrio cholerae E7946 ATCC 55056 0.34 CSW01_14850 VWA domain-containing protein 0.46 CSW01_00225 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 62
Shewanella loihica PV-4 0.34 Shew_2430 von Willebrand factor, type A (RefSeq) 0.40 Shew_3738 sun protein (RefSeq) low > 60
Lysobacter sp. OAE881 0.32 ABIE51_RS17145 VWA domain-containing protein 0.37 ABIE51_RS02255 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 62
Dyella japonica UNC79MFTsu3.2 0.30 ABZR86_RS11770 VWA domain-containing protein 0.38 ABZR86_RS13890 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 74
Rhodanobacter denitrificans MT42 0.29 LRK55_RS11600 VWA domain-containing protein 0.34 LRK55_RS09765 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 63
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS11875 VWA domain-containing protein 0.35 LRK54_RS10125 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 59
Xanthomonas campestris pv. campestris strain 8004 0.29 Xcc-8004.1185.1 BatA (Bacteroides aerotolerance operon) 0.32 Xcc-8004.4741.1 hypothetical protein low > 74
Rhodanobacter sp. FW510-T8 0.29 OKGIIK_12020 chlD BatB protein 0.37 OKGIIK_13790 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 52
Azospirillum brasilense Sp245 0.22 AZOBR_RS24375 membrane protein 0.21 AZOBR_RS00235 MFS transporter low > 97

Not shown: 5 genomes with orthologs for PP_2029 only; 58 genomes with orthologs for PP_0066 only