Conservation of cofitness between JDDGAC_06150 and JDDGAC_08205 in Escherichia coli ECRC98

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_06150 dauA C4-dicarboxylic acid transporter DauA 1.0 JDDGAC_08205 putP sodium/proline symporter PutP 0.57 19
Escherichia coli ECRC101 1.00 MCAODC_21835 dauA C4-dicarboxylic acid transporter DauA 1.00 MCAODC_23980 putP sodium/proline symporter PutP low > 87
Escherichia coli BL21 1.00 ECD_01181 C4-dicarboxylic acid transporter 1.00 ECD_01018 proline:sodium symporter low > 61
Escherichia coli ECRC100 1.00 OKFHMN_28425 dauA C4-dicarboxylic acid transporter DauA 1.00 OKFHMN_04595 putP sodium/proline symporter PutP low > 80
Escherichia coli ECRC99 1.00 KEDOAH_25420 dauA C4-dicarboxylic acid transporter DauA 1.00 KEDOAH_23150 putP sodium/proline symporter PutP — —
Escherichia coli ECRC102 1.00 NIAGMN_27810 dauA C4-dicarboxylic acid transporter DauA 1.00 NIAGMN_23740 putP sodium/proline symporter PutP — —
Escherichia coli BW25113 1.00 b1206 ychM orf, hypothetical protein (VIMSS) 1.00 b1015 putP proline:sodium symporter (NCBI) low > 76
Escherichia coli ECRC62 1.00 BNILDI_18790 dauA C4-dicarboxylic acid transporter DauA 1.00 BNILDI_19660 putP sodium/proline symporter PutP low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02481 C4-dicarboxylic acid transporter DauA 1.00 OHPLBJKB_02651 Sodium/proline symporter low > 73
Escherichia coli Nissle 1917 1.00 ECOLIN_RS07295 C4-dicarboxylic acid transporter DauA 1.00 ECOLIN_RS05300 sodium/proline symporter PutP low > 55
Escherichia coli ECOR27 1.00 NOLOHH_20635 dauA C4-dicarboxylic acid transporter DauA 1.00 NOLOHH_21495 putP sodium/proline symporter PutP low > 75
Escherichia fergusonii Becca 1.00 EFB2_02721 C4-dicarboxylic acid transporter DauA 1.00 EFB2_03065 Sodium/proline symporter low > 86
Escherichia coli ECOR38 1.00 HEPCGN_24890 dauA C4-dicarboxylic acid transporter DauA 1.00 HEPCGN_23540 putP sodium/proline symporter PutP low > 87
Klebsiella michiganensis M5al 0.92 BWI76_RS17465 C4-dicarboxylic acid transporter DauA 0.96 BWI76_RS10800 sodium:proline symporter low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF2781 Putative sulfate permease 0.94 GFF3303 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter low > 78
Enterobacter sp. TBS_079 0.89 MPMX20_02641 C4-dicarboxylic acid transporter DauA 0.92 MPMX20_01703 Sodium/proline symporter low > 85
Enterobacter asburiae PDN3 0.89 EX28DRAFT_0825 high affinity sulphate transporter 1 0.93 EX28DRAFT_1910 sodium/proline symporter low > 76
Pectobacterium carotovorum WPP14 0.72 HER17_RS09730 C4-dicarboxylic acid transporter DauA 0.79 HER17_RS01105 sodium/proline symporter PutP low > 75
Serratia liquefaciens MT49 0.70 IAI46_10305 C4-dicarboxylic acid transporter DauA 0.81 IAI46_15740 sodium/proline symporter PutP low > 86
Rahnella sp. WP5 0.69 EX31_RS07290 C4-dicarboxylic acid transporter DauA 0.80 EX31_RS09415 sodium/proline symporter PutP low > 89
Dickeya dadantii 3937 0.66 DDA3937_RS12220 C4-dicarboxylic acid transporter DauA 0.80 DDA3937_RS20120 sodium/proline symporter PutP low > 74
Dickeya dianthicola 67-19 0.66 HGI48_RS12310 C4-dicarboxylic acid transporter DauA 0.80 HGI48_RS20260 sodium/proline symporter PutP low > 71
Dickeya dianthicola ME23 0.66 DZA65_RS12750 C4-dicarboxylic acid transporter DauA 0.80 DZA65_RS21305 sodium/proline symporter PutP low > 75
Shewanella sp. ANA-3 0.55 Shewana3_3154 putative sulfate transporter YchM (RefSeq) 0.49 Shewana3_1451 sodium/proline symporter (RefSeq) low > 73
Marinobacter adhaerens HP15 0.52 HP15_3240 sulfate permease family protein 0.39 HP15_2205 sodium/solute symporter low > 73
Shewanella amazonensis SB2B 0.48 Sama_1067 putative sulfate transporter YchM (RefSeq) 0.50 Sama_2177 sodium/proline symporter (RefSeq) low > 62
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_5239 Putative sulfate permease 0.73 Pf6N2E2_3684 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter low > 103
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_16580 transporter 0.73 AO356_09010 proline:sodium symporter PutP low > 104
Pseudomonas fluorescens FW300-N1B4 0.45 Pf1N1B4_2936 Putative sulfate permease 0.75 Pf1N1B4_1487 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter low > 87
Pseudomonas sp. RS175 0.44 PFR28_03638 C4-dicarboxylic acid transporter DauA 0.73 PFR28_05054 Sodium/proline symporter low > 88
Pseudomonas stutzeri RCH2 0.43 Psest_3240 Sulfate permease and related transporters (MFS superfamily) 0.75 Psest_3075 sodium/proline symporter low > 67
Shewanella loihica PV-4 0.40 Shew_0497 putative sulfate transporter YchM (RefSeq) 0.50 Shew_2435 sodium/proline symporter (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.33 CSW01_14410 sodium-independent anion transporter 0.42 CSW01_19440 sodium/proline symporter PutP low > 62
Methanococcus maripaludis JJ 0.32 MMJJ_RS02280 sulfate permease 0.44 MMJJ_RS04160 sodium/proline symporter PutP low > 28
Methanococcus maripaludis S2 0.31 MMP_RS02795 sulfate permease 0.44 MMP_RS01215 sodium/proline symporter PutP low > 25
Pseudomonas fluorescens FW300-N2E3 0.30 AO353_10315 sulfate transporter 0.73 AO353_12815 proline:sodium symporter PutP low > 101
Alteromonas macleodii MIT1002 0.18 MIT1002_01122 Bicarbonate transporter BicA 0.47 MIT1002_01275 Proline permease low > 70
Pseudomonas fluorescens SBW25-INTG 0.18 PFLU_RS00125 SulP family inorganic anion transporter 0.75 PFLU_RS02235 sodium/proline symporter PutP low > 109
Pseudomonas fluorescens SBW25 0.18 PFLU_RS00125 SulP family inorganic anion transporter 0.75 PFLU_RS02235 sodium/proline symporter PutP low > 109
Pseudomonas simiae WCS417 0.17 PS417_00130 SulP family inorganic anion transporter 0.76 PS417_02180 proline:sodium symporter PutP low > 88
Pseudomonas fluorescens GW456-L13 0.16 PfGW456L13_643 Sulfate permease 0.76 PfGW456L13_221 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter low > 87
Acinetobacter radioresistens SK82 0.16 MPMX26_01076 C4-dicarboxylic acid transporter DauA 0.66 MPMX26_01468 Sodium/proline symporter low > 36
Pseudomonas syringae pv. syringae B728a 0.15 Psyr_0026 Sulfate transporter/antisigma-factor antagonist STAS:Sulphate transporter 0.74 Psyr_0507 Na+/solute symporter low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.15 Psyr_0026 Sulfate transporter/antisigma-factor antagonist STAS:Sulphate transporter 0.74 Psyr_0507 Na+/solute symporter low > 86
Pantoea sp. MT58 0.15 IAI47_21130 SulP family inorganic anion transporter 0.84 IAI47_08205 sodium/proline symporter PutP low > 76
Pseudomonas sp. S08-1 0.14 OH686_05645 Sulfate permease 0.74 OH686_03775 sodium/proline symporter low > 80
Pseudomonas putida KT2440 0.14 PP_4112 Sulphate transporter 0.76 PP_4946 sodium/L-proline transporter 0.16 9
Kangiella aquimarina DSM 16071 0.13 B158DRAFT_2337 Sulfate permease and related transporters (MFS superfamily) 0.49 B158DRAFT_2252 sodium/proline symporter low > 40
Erwinia tracheiphila SCR3 0.12 LU632_RS02400 SulP family inorganic anion transporter 0.79 LU632_RS13735 putP sodium/proline symporter PutP low > 74

Not shown: 40 genomes with orthologs for JDDGAC_06150 only; 2 genomes with orthologs for JDDGAC_08205 only