Conservation of cofitness between JDDGAC_25110 and JDDGAC_06040 in Escherichia coli ECRC98

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_25110 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.0 JDDGAC_06040 narK nitrate transporter NarK 0.67 7
Escherichia coli ECRC100 1.00 OKFHMN_21445 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 OKFHMN_28535 narK nitrate transporter NarK low > 80
Escherichia coli ECRC99 1.00 KEDOAH_06775 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 KEDOAH_25530 narK nitrate transporter NarK — —
Escherichia coli ECRC102 1.00 NIAGMN_19215 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 NIAGMN_27700 narK nitrate transporter NarK — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01145 Ferredoxin YfhL 1.00 OHPLBJKB_02460 Nitrate/nitrite transporter NarK low > 73
Escherichia coli ECRC101 1.00 MCAODC_11975 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 MCAODC_21725 narK nitrate transporter NarK low > 87
Escherichia coli ECOR38 1.00 HEPCGN_20590 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 HEPCGN_24995 narK nitrate transporter NarK low > 87
Escherichia coli ECRC62 0.99 BNILDI_11920 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 BNILDI_18670 narK nitrate transporter NarK low > 75
Escherichia coli Nissle 1917 0.99 ECOLIN_RS14495 4Fe-4S dicluster ferredoxin YfhL 1.00 ECOLIN_RS07390 nitrate transporter NarK — —
Escherichia coli BW25113 0.99 b2562 yfhL predicted 4Fe-4S cluster-containing protein (NCBI) 1.00 b1223 narK nitrate/nitrite transporter (NCBI) low > 76
Escherichia fergusonii Becca 0.99 EFB2_01334 Ferredoxin YfhL 1.00 EFB2_02702 Nitrate/nitrite transporter NarK low > 86
Escherichia coli ECOR27 0.99 NOLOHH_13120 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 NOLOHH_20520 narK nitrate transporter NarK low > 75
Escherichia coli BL21 0.99 ECD_02456 putative 4Fe-4S cluster-containing protein 1.00 ECD_01201 nitrate/nitrite transporter low > 61
Enterobacter asburiae PDN3 0.95 EX28DRAFT_0084 4Fe-4S dicluster domain 0.89 EX28DRAFT_0850 nitrite extrusion protein (nitrite facilitator) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF2470 4Fe-4S ferredoxin, iron-sulfur binding 0.92 GFF2763 Nitrate/nitrite transporter low > 78
Enterobacter sp. TBS_079 0.93 MPMX20_03433 Ferredoxin YfhL 0.89 MPMX20_02616 Nitrate/nitrite transporter NarK low > 85
Klebsiella michiganensis M5al 0.93 BWI76_RS21295 ferredoxin 0.89 BWI76_RS17340 NarK family nitrate/nitrite MFS transporter — —
Serratia liquefaciens MT49 0.84 IAI46_19525 YfhL family 4Fe-4S dicluster ferredoxin 0.78 IAI46_15600 NarK family nitrate/nitrite MFS transporter low > 86
Pectobacterium carotovorum WPP14 0.83 HER17_RS05840 YfhL family 4Fe-4S dicluster ferredoxin 0.67 HER17_RS09770 NarK family nitrate/nitrite MFS transporter low > 75
Dickeya dianthicola 67-19 0.81 HGI48_RS15795 YfhL family 4Fe-4S dicluster ferredoxin 0.72 HGI48_RS12030 NarK family nitrate/nitrite MFS transporter low > 71
Dickeya dadantii 3937 0.81 DDA3937_RS15710 YfhL family 4Fe-4S dicluster ferredoxin 0.72 DDA3937_RS11940 NarK family nitrate/nitrite MFS transporter low > 74
Dickeya dianthicola ME23 0.80 DZA65_RS16875 YfhL family 4Fe-4S dicluster ferredoxin 0.72 DZA65_RS12480 NarK family nitrate/nitrite MFS transporter low > 75
Rahnella sp. WP5 0.80 EX31_RS21860 YfhL family 4Fe-4S dicluster ferredoxin 0.75 EX31_RS06560 NarK family nitrate/nitrite MFS transporter low > 89
Pantoea sp. MT58 0.76 IAI47_04905 YfhL family 4Fe-4S dicluster ferredoxin 0.71 IAI47_04250 NarK family nitrate/nitrite MFS transporter low > 76
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS02000 ferredoxin 0.53 RR42_RS08825 nitrate/nitrite transporter NarK — —
Ralstonia solanacearum UW163 0.60 UW163_RS02500 4Fe-4S dicluster domain-containing protein 0.49 UW163_RS18090 NarK family nitrate/nitrite MFS transporter — —
Ralstonia solanacearum IBSBF1503 0.60 RALBFv3_RS11080 4Fe-4S dicluster domain-containing protein 0.49 RALBFv3_RS16735 NarK family nitrate/nitrite MFS transporter — —
Ralstonia solanacearum PSI07 0.60 RPSI07_RS22220 4Fe-4S dicluster domain-containing protein 0.50 RPSI07_RS06710 NarK family nitrate/nitrite MFS transporter — —
Acidovorax sp. GW101-3H11 0.59 Ac3H11_4828 Ferredoxin 0.49 Ac3H11_4491 Nitrate/nitrite transporter low > 79
Ralstonia solanacearum GMI1000 0.58 RS_RS01930 4Fe-4S dicluster domain-containing protein 0.48 RS_RS21810 NarK family nitrate/nitrite MFS transporter — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.57 Psyr_4759 4Fe-4S ferredoxin, iron-sulfur binding protein 0.09 Psyr_2102 Nitrate transporter — —
Pseudomonas syringae pv. syringae B728a 0.57 Psyr_4759 4Fe-4S ferredoxin, iron-sulfur binding protein 0.09 Psyr_2102 Nitrate transporter — —
Herbaspirillum seropedicae SmR1 0.57 HSERO_RS20685 ferredoxin 0.48 HSERO_RS18160 nitrate transporter — —
Paraburkholderia graminis OAS925 0.56 ABIE53_000703 ferredoxin 0.44 ABIE53_005347 NNP family nitrate/nitrite transporter-like MFS transporter low > 113
Paraburkholderia bryophila 376MFSha3.1 0.56 H281DRAFT_01943 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 0.06 H281DRAFT_00968 MFS transporter, NNP family, nitrate/nitrite transporter — —
Pseudomonas sp. S08-1 0.54 OH686_14145 Uncharacterized ferredoxin-like protein YfhL 0.08 OH686_00515 Nitrate transporter NasA low > 80
Pseudomonas fluorescens FW300-N2C3 0.54 AO356_13280 ferredoxin 0.58 AO356_25200 nitrate/nitrite transporter NarK — —
Pseudomonas sp. RS175 0.54 PFR28_04270 Ferredoxin 0.57 PFR28_01631 Nitrate/nitrite transporter NarK — —
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_4571 4Fe-4S ferredoxin, iron-sulfur binding 0.58 Pf6N2E2_728 Nitrate/nitrite transporter — —
Pseudomonas putida KT2440 0.54 PP_5124 putative 4Fe-4S cluster-containing protein 0.07 PP_2092 Nitrate transporter — —
Pseudomonas fluorescens FW300-N1B4 0.53 Pf1N1B4_2311 4Fe-4S ferredoxin, iron-sulfur binding 0.58 Pf1N1B4_5736 Nitrate/nitrite transporter — —
Pseudomonas fluorescens SBW25 0.53 PFLU_RS28510 YfhL family 4Fe-4S dicluster ferredoxin 0.09 PFLU_RS22580 NarK/NasA family nitrate transporter low > 109
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS28510 YfhL family 4Fe-4S dicluster ferredoxin 0.09 PFLU_RS22580 NarK/NasA family nitrate transporter — —
Pseudomonas fluorescens GW456-L13 0.53 PfGW456L13_980 4Fe-4S ferredoxin, iron-sulfur binding 0.11 PfGW456L13_4099 Nitrate/nitrite transporter — —
Pseudomonas simiae WCS417 0.53 PS417_26865 ferredoxin 0.59 PS417_15725 nitrate/nitrite transporter NarK — —
Pseudomonas fluorescens FW300-N2E3 0.53 AO353_08310 ferredoxin 0.57 AO353_22090 nitrate/nitrite transporter NarK — —
Rhodanobacter sp. FW510-T8 0.48 OKGIIK_02595 nuoI Ferredoxin 0.55 OKGIIK_05295 Nitrate/nitrite transporter low > 52
Xanthomonas campestris pv. campestris strain 8004 0.46 Xcc-8004.2157.1 4Fe-4S ferredoxin, iron-sulfur binding 0.06 Xcc-8004.2713.1 Nitrate/nitrite transporter — —

Not shown: 24 genomes with orthologs for JDDGAC_25110 only; 7 genomes with orthologs for JDDGAC_06040 only