Conservation of cofitness between IAI47_14585 and IAI47_13625 in Pantoea sp. MT58

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pantoea sp. MT58 1.0 IAI47_14585 P-II family nitrogen regulator 1.0 IAI47_13625 CDF family zinc transporter ZitB 0.36 6
Serratia liquefaciens MT49 1.00 IAI46_05080 P-II family nitrogen regulator 0.60 IAI46_06390 CDF family zinc transporter ZitB low > 86
Dickeya dadantii 3937 0.99 DDA3937_RS05695 P-II family nitrogen regulator 0.62 DDA3937_RS06555 CDF family zinc transporter ZitB low > 74
Pectobacterium carotovorum WPP14 0.99 HER17_RS15790 P-II family nitrogen regulator 0.59 HER17_RS14810 CDF family zinc transporter ZitB low > 75
Rahnella sp. WP5 0.99 EX31_RS22315 P-II family nitrogen regulator 0.60 EX31_RS23535 CDF family zinc transporter ZitB low > 89
Enterobacter asburiae PDN3 0.98 EX28DRAFT_2519 nitrogen regulatory protein P-II family 0.62 EX28DRAFT_2243 cation diffusion facilitator family transporter low > 76
Klebsiella michiganensis M5al 0.98 BWI76_RS06600 nitrogen regulatory protein P-II 2 0.61 BWI76_RS08590 zinc transporter ZitB
Enterobacter sp. TBS_079 0.98 MPMX20_01042 Nitrogen regulatory protein P-II 2 0.63 MPMX20_01379 Zinc transporter ZitB low > 85
Escherichia coli BW25113 0.97 b0450 glnK nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB (NCBI) 0.58 b0752 zitB zinc transporter ZitB (NCBI) low > 76
Escherichia coli ECRC62 0.97 BNILDI_22615 glnK P-II family nitrogen regulator 0.58 BNILDI_21175 zitB CDF family zinc transporter ZitB
Escherichia coli ECRC98 0.97 JDDGAC_11920 glnK P-II family nitrogen regulator 0.58 JDDGAC_10405 zitB CDF family zinc transporter ZitB
Escherichia coli ECRC99 0.97 KEDOAH_19700 glnK P-II family nitrogen regulator 0.58 KEDOAH_21215 zitB CDF family zinc transporter ZitB
Escherichia coli ECRC101 0.97 MCAODC_27490 glnK P-II family nitrogen regulator 0.58 MCAODC_25970 zitB CDF family zinc transporter ZitB
Escherichia coli ECRC102 0.97 NIAGMN_06320 glnK P-II family nitrogen regulator 0.58 NIAGMN_04800 zitB CDF family zinc transporter ZitB
Escherichia coli HS(pFamp)R (ATCC 700891) 0.97 OHPLBJKB_03223 Nitrogen regulatory protein P-II 2 0.58 OHPLBJKB_02961 Zinc transporter ZitB low > 73
Escherichia coli ECOR27 0.97 NOLOHH_01200 glnK P-II family nitrogen regulator 0.58 NOLOHH_23180 zitB CDF family zinc transporter ZitB
Escherichia coli ECOR38 0.97 HEPCGN_06880 glnK P-II family nitrogen regulator 0.58 HEPCGN_01525 zitB CDF family zinc transporter ZitB low > 85
Escherichia coli BL21 0.97 ECD_00402 nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB 0.58 ECD_00705 zinc efflux system low > 60
Escherichia fergusonii Becca 0.97 EFB2_03607 Nitrogen regulatory protein P-II 2 0.58 EFB2_03354 Zinc transporter ZitB low > 86
Escherichia coli ECRC101 0.97 OKFHMN_08265 glnK P-II family nitrogen regulator 0.58 OKFHMN_06750 zitB CDF family zinc transporter ZitB
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.96 GFF4367 Nitrogen regulatory protein P-II, glnK 0.62 GFF6 Cobalt-zinc-cadmium resistance protein CzcD
Pseudomonas stutzeri RCH2 0.81 Psest_3773 Nitrogen regulatory protein PII 0.25 Psest_0619 cation diffusion facilitator family transporter
Marinobacter adhaerens HP15 0.78 HP15_275 nitrogen regulatory protein PII 0.23 HP15_163 cation efflux family protein
Pseudomonas fluorescens GW456-L13 0.78 PfGW456L13_837 Nitrogen regulatory protein P-II, glnK 0.15 PfGW456L13_3547 Cobalt-zinc-cadmium resistance protein CzcD
Pseudomonas fluorescens SBW25 0.78 PFLU_RS29305 P-II family nitrogen regulator 0.27 PFLU_RS03455 cation transporter
Pseudomonas fluorescens SBW25-INTG 0.78 PFLU_RS29305 P-II family nitrogen regulator 0.27 PFLU_RS03455 cation transporter
Pseudomonas syringae pv. syringae B728a ΔmexB 0.78 Psyr_0190 nitrogen regulatory protein P-II 0.14 Psyr_1506 Cation efflux protein
Pseudomonas fluorescens FW300-N1B4 0.78 Pf1N1B4_2166 Nitrogen regulatory protein P-II, glnK 0.15 Pf1N1B4_4470 Cobalt-zinc-cadmium resistance protein CzcD
Pseudomonas putida KT2440 0.78 PP_5234 activator of NRII(GlnL/NtrB) phosphatase 0.31 PP_0026 putative cobalt/cadmium/zinc exporter
Pseudomonas fluorescens FW300-N2E3 0.78 AO353_09075 transcriptional regulator 0.16 AO353_26685 cobalt efflux pump (from data)
Pseudomonas syringae pv. syringae B728a 0.78 Psyr_0190 nitrogen regulatory protein P-II 0.14 Psyr_1506 Cation efflux protein
Rhodanobacter denitrificans FW104-10B01 0.77 LRK54_RS10565 P-II family nitrogen regulator 0.26 LRK54_RS01630 cation diffusion facilitator family transporter low > 59
Dyella japonica UNC79MFTsu3.2 0.77 ABZR86_RS13505 P-II family nitrogen regulator 0.27 ABZR86_RS07885 cation diffusion facilitator family transporter low > 74
Rhodanobacter sp. FW510-T8 0.77 OKGIIK_13340 glnK P-II family nitrogen regulator 0.32 OKGIIK_06285 Cation diffusion facilitator family transporter low > 52
Rhodanobacter denitrificans MT42 0.77 LRK55_RS10205 P-II family nitrogen regulator 0.32 LRK55_RS17315 cation diffusion facilitator family transporter low > 63
Azospirillum sp. SherDot2 0.77 MPMX19_05521 Nitrogen regulatory protein P-II 2 0.25 MPMX19_01366 Cadmium, cobalt and zinc/H(+)-K(+) antiporter low > 112
Acinetobacter radioresistens SK82 0.76 MPMX26_00149 Nitrogen regulatory protein P-II 2 0.29 MPMX26_02831 Metal cation efflux system protein CzcD
Azospirillum brasilense Sp245 0.76 AZOBR_RS02290 nitrogen regulatory protein P-II 1 0.37 AZOBR_RS26670 zinc transporter ZitB low > 97
Dechlorosoma suillum PS 0.76 Dsui_0764 nitrogen regulatory protein PII 0.27 Dsui_3453 cation diffusion facilitator family transporter low > 51
Alteromonas macleodii MIT1002 0.75 MIT1002_00416 Nitrogen regulatory protein P-II 2 0.22 MIT1002_03835 Cadmium, cobalt and zinc/H(+)-K(+) antiporter low > 70
Variovorax sp. SCN45 0.75 GFF5120 Nitrogen regulatory protein P-II, GlnK 0.31 GFF4691 Cobalt/zinc/cadmium resistance protein CzcD low > 127
Variovorax sp. OAS795 0.75 ABID97_RS03630 P-II family nitrogen regulator 0.10 ABID97_RS24870 CDF family Co(II)/Ni(II) efflux transporter DmeF low > 91
Magnetospirillum magneticum AMB-1 0.73 AMB_RS00075 P-II family nitrogen regulator 0.18 AMB_RS05190 cation transporter low > 64
Shewanella amazonensis SB2B 0.73 Sama_0650 nitrogen regulatory protein P-II (RefSeq) 0.11 Sama_1755 cation efflux family protein (RefSeq) low > 62
Rhodopseudomonas palustris CGA009 0.72 TX73_001430 P-II family nitrogen regulator 0.24 TX73_001140 cation diffusion facilitator family transporter low > 86
Agrobacterium fabrum C58 0.71 Atu2757 nitrogen regulatory protein PII 0.17 Atu0891 cation efflux system protein low > 89
Sinorhizobium meliloti 1021 0.70 SMc03806 nitrogen regulatory protein PII 2 0.17 SMc04167 histidine-rich transporter transmembrane protein low > 103
Bifidobacterium breve UCC2003 0.61 BBR_RS11520 P-II family nitrogen regulator 0.22 BBR_RS16990 cation transporter low > 34

Not shown: 17 genomes with orthologs for IAI47_14585 only; 16 genomes with orthologs for IAI47_13625 only