Conservation of cofitness between IAI46_03910 and IAI46_22695 in Serratia liquefaciens MT49

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Serratia liquefaciens MT49 1.0 IAI46_03910 inner membrane protein YpjD 1.0 IAI46_22695 AsmA2 domain-containing protein YhdP 0.54 9
Rahnella sp. WP5 0.81 EX31_RS07735 inner membrane protein YpjD 0.66 EX31_RS12260 AsmA2 domain-containing protein low > 89
Pectobacterium carotovorum WPP14 0.81 HER17_RS05105 inner membrane protein YpjD 0.64 HER17_RS20145 AsmA2 domain-containing protein YhdP low > 75
Escherichia coli ECRC62 0.76 BNILDI_11645 ypjD Inner membrane protein YpjD 0.57 BNILDI_01985 yhdP AsmA2 domain-containing protein YhdP — —
Escherichia coli ECOR38 0.76 HEPCGN_20285 ypjD Inner membrane protein YpjD 0.57 HEPCGN_16615 yhdP AsmA2 domain-containing protein YhdP low > 85
Escherichia coli ECRC99 0.76 KEDOAH_07055 ypjD Inner membrane protein YpjD 0.57 KEDOAH_10400 yhdP AsmA2 domain-containing protein YhdP — —
Escherichia coli ECRC101 0.76 MCAODC_11695 ypjD Inner membrane protein YpjD 0.57 MCAODC_08270 yhdP AsmA2 domain-containing protein YhdP — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.76 OHPLBJKB_01095 Inner membrane protein YpjD 0.57 OHPLBJKB_00459 hypothetical protein low > 73
Escherichia coli ECRC102 0.76 NIAGMN_18935 ypjD Inner membrane protein YpjD 0.57 NIAGMN_15510 yhdP AsmA2 domain-containing protein YhdP — —
Escherichia coli ECRC101 0.76 OKFHMN_21165 ypjD Inner membrane protein YpjD 0.57 OKFHMN_17750 yhdP AsmA2 domain-containing protein YhdP — —
Escherichia coli BL21 0.76 ECD_02500 cytochrome c assembly protein family inner membrane protein 0.56 ECD_03105 DUF3971-AsmA2 domains protein low > 60
Escherichia coli ECOR27 0.76 NOLOHH_12840 ypjD Inner membrane protein YpjD 0.57 NOLOHH_09535 yhdP AsmA2 domain-containing protein YhdP 0.65 19
Escherichia coli ECRC98 0.76 JDDGAC_24830 ypjD Inner membrane protein YpjD 0.57 JDDGAC_21375 yhdP AsmA2 domain-containing protein YhdP — —
Klebsiella michiganensis M5al 0.76 BWI76_RS21535 inner membrane protein YpjD 0.56 BWI76_RS25475 TIGR02099 family protein low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.76 GFF4167 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) 0.55 GFF2139 FIG005080: Possible exported protein low > 78
Escherichia coli BW25113 0.76 b2611 ypjD predicted inner membrane protein (RefSeq) 0.57 b4472 yhdP conserved membrane protein, predicted transporter (NCBI) low > 76
Escherichia coli Nissle 1917 0.76 ECOLIN_RS14755 inner membrane protein YpjD 0.57 ECOLIN_RS18600 AsmA2 domain-containing protein YhdP low > 52
Escherichia fergusonii Becca 0.76 EFB2_01281 Inner membrane protein YpjD 0.57 EFB2_00585 hypothetical protein low > 86
Pantoea sp. MT58 0.76 IAI47_04365 inner membrane protein YpjD 0.55 IAI47_02460 AsmA2 domain-containing protein YhdP low > 76
Dickeya dianthicola ME23 0.74 DZA65_RS17390 inner membrane protein YpjD 0.60 DZA65_RS01435 AsmA2 domain-containing protein low > 75
Dickeya dianthicola 67-19 0.74 HGI48_RS16295 inner membrane protein YpjD 0.59 HGI48_RS01375 AsmA2 domain-containing protein YhdP low > 71
Dickeya dadantii 3937 0.74 DDA3937_RS16185 inner membrane protein YpjD 0.60 DDA3937_RS01455 AsmA2 domain-containing protein YhdP low > 74
Enterobacter sp. TBS_079 0.73 MPMX20_03481 Inner membrane protein YpjD 0.56 MPMX20_04152 hypothetical protein low > 85
Enterobacter asburiae PDN3 0.73 EX28DRAFT_2714 ABC-type uncharacterized transport system, permease component 0.56 EX28DRAFT_3296 TIGR02099 family protein low > 76
Erwinia tracheiphila SCR3 0.73 LU632_RS15675 inner membrane protein YpjD 0.54 LU632_RS21425 yhdP AsmA2 domain-containing protein YhdP 0.47 35
Vibrio cholerae E7946 ATCC 55056 0.49 CSW01_02985 inner membrane protein YpjD 0.21 CSW01_02210 DUF3971 domain-containing protein low > 62
Shewanella sp. ANA-3 0.37 Shewana3_3019 cytochrome c assembly protein (RefSeq) 0.16 Shewana3_3643 hypothetical protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.36 SO1355 membrane protein, putative (NCBI ptt file) 0.15 SO4093 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.35 Shew_1061 cytochrome c assembly protein (RefSeq) 0.15 Shew_0408 hypothetical protein (RefSeq) — —
Alteromonas macleodii MIT1002 0.33 MIT1002_01295 Inner membrane protein YpjD 0.15 MIT1002_00225 putative protein involved in outer membrane biogenesis low > 70
Pseudomonas fluorescens FW300-N2E3 0.24 AO353_04395 cytochrome C assembly protein 0.08 AO353_05225 hypothetical protein — —
Pseudomonas sp. RS175 0.22 PFR28_00325 Inner membrane protein YpjD 0.07 PFR28_00159 hypothetical protein 0.28 76
Pseudomonas sp. S08-1 0.22 OH686_17715 Inner membrane protein YpjD 0.09 OH686_08590 Possible exported protein — —
Pseudomonas putida KT2440 0.22 PP_1460 putative Membrane protein 0.08 PP_0938 conserved protein of unknown function 0.35 25
Pseudomonas simiae WCS417 0.22 PS417_22930 cytochrome C assembly protein 0.08 PS417_04275 hypothetical protein — —
Pseudomonas fluorescens GW456-L13 0.22 PfGW456L13_1714 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) 0.08 PfGW456L13_5028 FIG005080: Possible exported protein low > 87
Pseudomonas fluorescens SBW25 0.21 PFLU_RS24590 cytochrome c assembly protein 0.08 PFLU_RS04330 TIGR02099 family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.21 PFLU_RS24590 cytochrome c assembly protein 0.08 PFLU_RS04330 TIGR02099 family protein low > 109
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_3151 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) 0.07 Pf6N2E2_3282 FIG005080: Possible exported protein low > 103
Pseudomonas fluorescens FW300-N2C3 0.21 AO356_06415 cytochrome C assembly protein 0.07 AO356_07105 hypothetical protein low > 104
Pseudomonas syringae pv. syringae B728a 0.21 Psyr_1280 Cytochrome c assembly protein 0.09 Psyr_4158 conserved hypothetical protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.21 Psyr_1280 Cytochrome c assembly protein 0.09 Psyr_4158 conserved hypothetical protein low > 86
Pseudomonas stutzeri RCH2 0.21 Psest_3135 ABC-type uncharacterized transport system, permease component 0.08 Psest_3322 TIGR02099 family protein — —
Pseudomonas fluorescens FW300-N1B4 0.20 Pf1N1B4_875 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) 0.08 Pf1N1B4_1094 FIG005080: Possible exported protein low > 87
Rhodanobacter sp. FW510-T8 0.18 OKGIIK_09575 ypjD Cytochrome C assembly protein 0.09 OKGIIK_10285 TIGR02099 family protein — —
Xanthomonas campestris pv. campestris strain 8004 0.15 Xcc-8004.3775.1 FIG001154: CcsA-related protein 0.07 Xcc-8004.1881.1 FIG005080: Possible exported protein low > 74
Lysobacter sp. OAE881 0.13 ABIE51_RS07730 cytochrome c biogenesis protein CcsA 0.07 ABIE51_RS06790 YhdP family protein low > 62
Dyella japonica UNC79MFTsu3.2 0.13 ABZR86_RS08835 cytochrome c biogenesis protein CcsA 0.10 ABZR86_RS21725 YhdP family protein — —

Not shown: 9 genomes with orthologs for IAI46_03910 only; 7 genomes with orthologs for IAI46_22695 only