Conservation of cofitness between HSERO_RS05365 and HSERO_RS24040 in Herbaspirillum seropedicae SmR1

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS05365 transporter 1.0 HSERO_RS24040 glutamine amidotransferase 0.24 19
Azospirillum sp. SherDot2 0.38 MPMX19_05305 Purine ribonucleoside efflux pump NepI 0.52 MPMX19_00595 Putative glutamine amidotransferase YafJ low > 112
Ralstonia sp. UNC404CL21Col 0.37 ABZR87_RS12380 MFS transporter 0.67 ABZR87_RS07540 class II glutamine amidotransferase low > 80
Enterobacter sp. TBS_079 0.36 MPMX20_02689 Purine ribonucleoside efflux pump NepI 0.52 MPMX20_00912 Putative glutamine amidotransferase YafJ low > 85
Pectobacterium carotovorum WPP14 0.36 HER17_RS16845 MFS transporter 0.51 HER17_RS04650 class II glutamine amidotransferase low > 75
Rahnella sp. WP5 0.35 EX31_RS02065 MFS transporter 0.50 EX31_RS21015 class II glutamine amidotransferase low > 89
Enterobacter asburiae PDN3 0.34 EX28DRAFT_0776 Arabinose efflux permease 0.51 EX28DRAFT_2666 Predicted glutamine amidotransferase low > 76
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_29615 transporter 0.52 AO356_04350 glutamine amidotransferase low > 104
Variovorax sp. OAS795 0.34 ABID97_RS08210 MFS transporter 0.69 ABID97_RS04635 class II glutamine amidotransferase low > 91
Pantoea sp. MT58 0.34 IAI47_17680 MFS transporter 0.50 IAI47_15185 class II glutamine amidotransferase low > 76
Variovorax sp. SCN45 0.33 GFF3833 FIG01056426: hypothetical protein 0.67 GFF6320 Putative glutamine amidotransferase YafJ low > 127
Klebsiella michiganensis M5al 0.33 BWI76_RS27765 MFS transporter 0.50 BWI76_RS05480 class II glutamine amidotransferase low > 92
Pseudomonas simiae WCS417 0.33 PS417_11060 transporter 0.52 PS417_07455 glutamine amidotransferase low > 88
Pseudomonas fluorescens SBW25 0.32 PFLU_RS11690 MFS transporter 0.51 PFLU_RS07540 class II glutamine amidotransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS11690 MFS transporter 0.51 PFLU_RS07540 class II glutamine amidotransferase low > 109
Paraburkholderia graminis OAS925 0.30 ABIE53_005584 putative MFS family arabinose efflux permease 0.67 ABIE53_003506 putative glutamine amidotransferase low > 113
Escherichia coli ECOR38 0.30 HEPCGN_13950 nepI purine ribonucleoside efflux pump NepI 0.52 HEPCGN_07875 yafJ Putative glutamine amidotransferase YafJ low > 87
Escherichia coli BW25113 0.30 b3662 nepI predicted transporter (RefSeq) 0.52 b0223 yafJ predicted amidotransfease (NCBI) low > 76
Escherichia coli ECRC62 0.30 BNILDI_04155 nepI purine ribonucleoside efflux pump NepI 0.52 BNILDI_00335 yafJ Putative glutamine amidotransferase YafJ low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.30 OHPLBJKB_00038 Purine ribonucleoside efflux pump NepI 0.52 OHPLBJKB_03416 Putative glutamine amidotransferase YafJ low > 73
Escherichia coli ECOR27 0.30 NOLOHH_07370 nepI purine ribonucleoside efflux pump NepI 0.52 NOLOHH_02140 yafJ Putative glutamine amidotransferase YafJ low > 75
Escherichia coli Nissle 1917 0.30 ECOLIN_RS21125 purine ribonucleoside efflux pump NepI 0.52 ECOLIN_RS01755 class II glutamine amidotransferase low > 55
Escherichia coli ECRC98 0.30 JDDGAC_18855 nepI purine ribonucleoside efflux pump NepI 0.52 JDDGAC_13395 yafJ class II glutamine amidotransferase low > 86
Escherichia coli ECRC101 0.30 MCAODC_05740 nepI purine ribonucleoside efflux pump NepI 0.52 MCAODC_00290 yafJ class II glutamine amidotransferase low > 87
Escherichia coli ECRC100 0.30 OKFHMN_15230 nepI purine ribonucleoside efflux pump NepI 0.52 OKFHMN_09770 yafJ class II glutamine amidotransferase low > 80
Escherichia fergusonii Becca 0.30 EFB2_00038 Purine ribonucleoside efflux pump NepI 0.53 EFB2_03794 Putative glutamine amidotransferase YafJ low > 86
Escherichia coli ECRC99 0.30 KEDOAH_12915 nepI purine ribonucleoside efflux pump NepI 0.52 KEDOAH_18385 yafJ class II glutamine amidotransferase — —
Escherichia coli ECRC102 0.30 NIAGMN_12990 nepI purine ribonucleoside efflux pump NepI 0.52 NIAGMN_07630 yafJ class II glutamine amidotransferase — —
Paraburkholderia sabiae LMG 24235 0.29 QEN71_RS13705 MFS transporter 0.67 QEN71_RS26860 class II glutamine amidotransferase low > 153
Serratia liquefaciens MT49 0.29 IAI46_07000 MFS transporter 0.51 IAI46_04345 class II glutamine amidotransferase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.29 GFF318 Putative transport protein 0.51 GFF4102 Predicted glutamine amidotransferase low > 78
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_2246 Arabinose efflux permease 0.52 Pf6N2E2_2711 Glutamine amidotransferase, class-II low > 103
Paraburkholderia bryophila 376MFSha3.1 0.29 H281DRAFT_01232 Predicted arabinose efflux permease, MFS family 0.67 H281DRAFT_04266 glutamine amidotransferase low > 103
Pseudomonas sp. RS175 0.29 PFR28_01200 Purine ribonucleoside efflux pump NepI 0.51 PFR28_00725 Putative glutamine amidotransferase YafJ low > 88
Burkholderia phytofirmans PsJN 0.29 BPHYT_RS28285 MFS transporter 0.64 BPHYT_RS16680 glutamine amidotransferase low > 109
Pseudomonas putida KT2440 0.28 PP_2647 Major facilitator family transporter 0.49 PP_4581 putative amidotransferase 0.13 71
Dickeya dianthicola 67-19 0.28 HGI48_RS08210 MFS transporter 0.50 HGI48_RS16655 class II glutamine amidotransferase low > 71
Cupriavidus basilensis FW507-4G11 0.27 RR42_RS30495 transcriptional regulator 0.68 RR42_RS02595 glutamine amidotransferase low > 128
Ralstonia solanacearum PSI07 0.27 RPSI07_RS04185 MFS transporter 0.67 RPSI07_RS21635 class II glutamine amidotransferase low > 81
Ralstonia solanacearum GMI1000 0.27 RS_RS01025 MFS transporter 0.66 RS_RS02405 class II glutamine amidotransferase low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.27 Psyr_3800 Major facilitator superfamily 0.51 Psyr_1576 Glutamine amidotransferase, class-II low > 86
Pseudomonas syringae pv. syringae B728a 0.27 Psyr_3800 Major facilitator superfamily 0.51 Psyr_1576 Glutamine amidotransferase, class-II low > 86
Ralstonia solanacearum IBSBF1503 0.26 RALBFv3_RS20735 MFS transporter 0.66 RALBFv3_RS11575 class II glutamine amidotransferase low > 76
Pseudomonas fluorescens FW300-N1B4 0.26 Pf1N1B4_4993 Arabinose efflux permease 0.51 Pf1N1B4_3359 Glutamine amidotransferase, class-II — —
Azospirillum brasilense Sp245 0.14 AZOBR_RS21030 MFS transporter 0.50 AZOBR_RS05605 glutamine amidotransferase low > 97

Not shown: 7 genomes with orthologs for HSERO_RS05365 only; 21 genomes with orthologs for HSERO_RS24040 only