Conservation of cofitness between HSERO_RS01565 and HSERO_RS22770 in Herbaspirillum seropedicae SmR1

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS01565 hemolysin secretion protein D 1.0 HSERO_RS22770 LysR family transcriptional regulator 0.38 2
Burkholderia phytofirmans PsJN 0.57 BPHYT_RS22510 MexE family multidrug efflux RND transporter periplasmic adaptor subunit 0.30 BPHYT_RS26650 LysR family transcriptional regulator — —
Ralstonia sp. UNC404CL21Col 0.56 ABZR87_RS19405 efflux RND transporter periplasmic adaptor subunit 0.32 ABZR87_RS20875 LysR family transcriptional regulator low > 80
Paraburkholderia sabiae LMG 24235 0.55 QEN71_RS20100 efflux RND transporter periplasmic adaptor subunit 0.77 QEN71_RS19730 LysR family transcriptional regulator low > 153
Ralstonia solanacearum PSI07 0.54 RPSI07_RS05170 efflux RND transporter periplasmic adaptor subunit 0.34 RPSI07_RS02550 LysR family transcriptional regulator low > 81
Azospirillum sp. SherDot2 0.52 MPMX19_02967 Efflux pump periplasmic linker BepF 0.56 MPMX19_00645 HTH-type transcriptional regulator MetR low > 112
Cupriavidus basilensis FW507-4G11 0.50 RR42_RS27680 MexE family multidrug efflux RND transporter periplasmic adaptor subunit 0.31 RR42_RS30655 LysR family transcriptional regulator low > 128
Variovorax sp. SCN45 0.46 GFF430 RND efflux system, membrane fusion protein 0.86 GFF4176 Transcriptional activator MetR low > 127
Variovorax sp. OAS795 0.45 ABID97_RS17355 efflux RND transporter periplasmic adaptor subunit 0.30 ABID97_RS19400 LysR family transcriptional regulator — —
Acidovorax sp. GW101-3H11 0.44 Ac3H11_259 Probable Co/Zn/Cd efflux system membrane fusion protein 0.30 Ac3H11_2344 Transcriptional activator MetR low > 79
Pseudomonas syringae pv. syringae B728a ΔmexB 0.43 Psyr_2967 Secretion protein HlyD 0.42 Psyr_3917 transcriptional regulator, LysR family low > 86
Pseudomonas syringae pv. syringae B728a 0.43 Psyr_2967 Secretion protein HlyD 0.42 Psyr_3917 transcriptional regulator, LysR family low > 86
Pseudomonas fluorescens FW300-N2E2 0.43 Pf6N2E2_947 Multidrug efflux membrane fusion protein MexE 0.40 Pf6N2E2_5471 Transcriptional activator MetR low > 103
Pseudomonas sp. RS175 0.43 PFR28_02012 Multidrug resistance protein MdtA 0.40 PFR28_03478 HTH-type transcriptional regulator MetR low > 88
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_3061 Multidrug efflux membrane fusion protein MexE 0.40 PfGW456L13_4778 Transcriptional activator MetR low > 87
Pseudomonas fluorescens FW300-N1B4 0.42 Pf1N1B4_4865 Multidrug efflux membrane fusion protein MexE 0.40 Pf1N1B4_784 Transcriptional activator MetR low > 87
Pseudomonas fluorescens FW300-N2E3 0.41 AO353_23965 RND transporter MFP subunit 0.40 AO353_16210 XRE family transcriptional regulator low > 101
Pseudomonas putida KT2440 0.41 PP_3425 Efflux transporter RND family, MFP subunit 0.41 PP_2696 DNA-binding transcriptional regulator, homocysteine-binding low > 96
Agrobacterium fabrum C58 0.40 Atu2482 HlyD family secretion protein 0.57 Atu3827 LysR family transcriptional regulator low > 89
Pseudomonas stutzeri RCH2 0.40 Psest_2145 RND family efflux transporter, MFP subunit 0.42 Psest_1450 Transcriptional regulator — —
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS14265 efflux RND transporter periplasmic adaptor subunit 0.41 PFLU_RS05540 LysR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25 0.40 PFLU_RS14265 efflux RND transporter periplasmic adaptor subunit 0.41 PFLU_RS05540 LysR family transcriptional regulator low > 109
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_27600 RND transporter MFP subunit 0.40 AO356_17735 XRE family transcriptional regulator low > 104
Pseudomonas simiae WCS417 0.39 PS417_13195 RND transporter MFP subunit 0.40 PS417_05455 XRE family transcriptional regulator low > 88
Pseudomonas sp. S08-1 0.38 OH686_01010 Multidrug efflux system, membrane fusion component 0.41 OH686_20465 Transcriptional activator MetR low > 80
Pantoea sp. MT58 0.37 IAI47_10305 efflux RND transporter periplasmic adaptor subunit 0.36 IAI47_18315 HTH-type transcriptional regulator MetR low > 76
Enterobacter asburiae PDN3 0.37 EX28DRAFT_1473 RND family efflux transporter, MFP subunit 0.36 EX28DRAFT_4493 Transcriptional regulator low > 76
Shewanella sp. ANA-3 0.37 Shewana3_1077 RND family efflux transporter MFP subunit (RefSeq) 0.35 Shewana3_3470 LysR family transcriptional regulator (RefSeq) low > 73
Serratia liquefaciens MT49 0.36 IAI46_09930 efflux RND transporter periplasmic adaptor subunit 0.34 IAI46_01030 HTH-type transcriptional regulator MetR low > 86
Enterobacter sp. TBS_079 0.36 MPMX20_01154 Multidrug resistance protein MdtE 0.36 MPMX20_04452 HTH-type transcriptional regulator MetR low > 85
Klebsiella michiganensis M5al 0.36 BWI76_RS12950 acriflavin resistance protein AcrA 0.33 BWI76_RS01275 LysR family transcriptional regulator low > 92
Rahnella sp. WP5 0.36 EX31_RS01490 efflux RND transporter periplasmic adaptor subunit 0.35 EX31_RS25370 HTH-type transcriptional regulator MetR low > 89
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.3478.1 RND efflux system, membrane fusion protein CmeA 0.84 Xcc-8004.400.1 Transcriptional activator MetR low > 74
Alteromonas macleodii MIT1002 0.34 MIT1002_02999 Efflux pump periplasmic linker BepF 0.56 MIT1002_01119 HTH-type transcriptional regulator GltC low > 70
Azospirillum brasilense Sp245 0.31 AZOBR_RS16480 hemolysin secretion protein D 0.73 AZOBR_RS24270 LysR family transcriptional regulator low > 97
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.29 GFF4247 RND efflux system, membrane fusion protein CmeA 0.36 GFF253 Transcriptional activator MetR low > 78

Not shown: 22 genomes with orthologs for HSERO_RS01565 only; 31 genomes with orthologs for HSERO_RS22770 only