Conservation of cofitness between HSERO_RS05365 and HSERO_RS21180 in Herbaspirillum seropedicae SmR1

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS05365 transporter 1.0 HSERO_RS21180 MFS transporter 0.25 15
Lysobacter sp. OAE881 0.64 ABIE51_RS11010 MFS transporter 0.21 ABIE51_RS18570 MFS transporter low > 62
Azospirillum sp. SherDot2 0.38 MPMX19_05305 Purine ribonucleoside efflux pump NepI 0.23 MPMX19_04752 putative transporter YycB 0.27 81
Ralstonia sp. UNC404CL21Col 0.37 ABZR87_RS12380 MFS transporter 0.24 ABZR87_RS20935 CynX/NimT family MFS transporter low > 80
Enterobacter sp. TBS_079 0.36 MPMX20_02689 Purine ribonucleoside efflux pump NepI 0.39 MPMX20_01834 2-nitroimidazole transporter low > 85
Pectobacterium carotovorum WPP14 0.36 HER17_RS16845 MFS transporter 0.14 HER17_RS13040 MFS transporter low > 75
Rahnella sp. WP5 0.35 EX31_RS02065 MFS transporter 0.25 EX31_RS16910 MFS transporter low > 89
Enterobacter asburiae PDN3 0.34 EX28DRAFT_0776 Arabinose efflux permease 0.42 EX28DRAFT_1781 cyanate transporter low > 76
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_29615 transporter 0.25 AO356_17415 MFS transporter low > 104
Pantoea sp. MT58 0.34 IAI47_17680 MFS transporter 0.28 IAI47_20605 MFS transporter low > 76
Variovorax sp. OAS795 0.34 ABID97_RS08210 MFS transporter 0.24 ABID97_RS08055 MFS transporter low > 91
Pseudomonas simiae WCS417 0.33 PS417_11060 transporter 0.24 PS417_04925 MFS transporter low > 88
Klebsiella michiganensis M5al 0.33 BWI76_RS27765 MFS transporter 0.42 BWI76_RS21705 MFS transporter low > 92
Variovorax sp. SCN45 0.33 GFF3833 FIG01056426: hypothetical protein 0.23 GFF5970 Uncharacterized MFS-type transporter low > 127
Pseudomonas fluorescens SBW25 0.32 PFLU_RS11690 MFS transporter 0.26 PFLU_RS04995 CynX/NimT family MFS transporter low > 109
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS11690 MFS transporter 0.26 PFLU_RS04995 CynX/NimT family MFS transporter low > 109
Paraburkholderia graminis OAS925 0.30 ABIE53_005584 putative MFS family arabinose efflux permease 0.21 ABIE53_005196 CP family cyanate transporter-like MFS transporter low > 113
Escherichia coli ECOR38 0.30 HEPCGN_13950 nepI purine ribonucleoside efflux pump NepI 0.42 HEPCGN_05065 nimT 2-nitroimidazole transporter low > 87
Escherichia coli ECOR27 0.30 NOLOHH_07370 nepI purine ribonucleoside efflux pump NepI 0.42 NOLOHH_17205 nimT 2-nitroimidazole transporter low > 75
Escherichia coli BW25113 0.30 b3662 nepI predicted transporter (RefSeq) 0.42 b1791 yeaN predicted transporter (NCBI) low > 76
Escherichia coli ECRC62 0.30 BNILDI_04155 nepI purine ribonucleoside efflux pump NepI 0.42 BNILDI_15990 nimT 2-nitroimidazole transporter low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.30 OHPLBJKB_00038 Purine ribonucleoside efflux pump NepI 0.42 OHPLBJKB_01942 2-nitroimidazole transporter low > 73
Escherichia coli ECRC99 0.30 KEDOAH_12915 nepI purine ribonucleoside efflux pump NepI 0.42 KEDOAH_01435 nimT 2-nitroimidazole transporter — —
Escherichia coli ECRC98 0.30 JDDGAC_18855 nepI purine ribonucleoside efflux pump NepI 0.42 JDDGAC_01250 nimT 2-nitroimidazole transporter low > 86
Escherichia coli ECRC102 0.30 NIAGMN_12990 nepI purine ribonucleoside efflux pump NepI 0.42 NIAGMN_01390 nimT 2-nitroimidazole transporter — —
Escherichia coli ECRC101 0.30 MCAODC_05740 nepI purine ribonucleoside efflux pump NepI 0.42 MCAODC_18735 nimT 2-nitroimidazole transporter low > 87
Escherichia coli ECRC100 0.30 OKFHMN_15230 nepI purine ribonucleoside efflux pump NepI 0.42 OKFHMN_26675 nimT 2-nitroimidazole transporter low > 80
Escherichia fergusonii Becca 0.30 EFB2_00038 Purine ribonucleoside efflux pump NepI 0.44 EFB2_02204 2-nitroimidazole transporter low > 86
Escherichia coli Nissle 1917 0.30 ECOLIN_RS21125 purine ribonucleoside efflux pump NepI 0.41 ECOLIN_RS09980 2-nitroimidazole transporter — —
Paraburkholderia sabiae LMG 24235 0.29 QEN71_RS13705 MFS transporter 0.23 QEN71_RS20755 MFS transporter low > 153
Serratia liquefaciens MT49 0.29 IAI46_07000 MFS transporter 0.31 IAI46_20590 MFS transporter low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.29 GFF318 Putative transport protein 0.41 GFF3465 hypothetical protein low > 78
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_2246 Arabinose efflux permease 0.25 Pf6N2E2_5409 Cyanate transport protein CynX low > 103
Paraburkholderia bryophila 376MFSha3.1 0.29 H281DRAFT_01232 Predicted arabinose efflux permease, MFS family 0.21 H281DRAFT_01563 MFS transporter, CP family, cyanate transporter low > 103
Pseudomonas sp. RS175 0.29 PFR28_01200 Purine ribonucleoside efflux pump NepI 0.25 PFR28_03538 putative transporter YycB low > 88
Burkholderia phytofirmans PsJN 0.29 BPHYT_RS28285 MFS transporter 0.11 BPHYT_RS28160 MFS transporter low > 109
Pseudomonas putida KT2440 0.28 PP_2647 Major facilitator family transporter 0.26 PP_0970 Cyanate MFS transporter low > 96
Dickeya dianthicola 67-19 0.28 HGI48_RS08210 MFS transporter 0.10 HGI48_RS08910 MFS transporter low > 71
Ralstonia solanacearum PSI07 0.27 RPSI07_RS04185 MFS transporter 0.24 RPSI07_RS02495 MFS transporter low > 81
Ralstonia solanacearum GMI1000 0.27 RS_RS01025 MFS transporter 0.25 RS_RS20315 MFS transporter low > 80
Pseudomonas syringae pv. syringae B728a 0.27 Psyr_3800 Major facilitator superfamily 0.24 Psyr_1076 Cyanate transport system protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.27 Psyr_3800 Major facilitator superfamily 0.24 Psyr_1076 Cyanate transport system protein low > 86
Ralstonia solanacearum IBSBF1503 0.26 RALBFv3_RS20735 MFS transporter 0.23 RALBFv3_RS20355 MFS transporter low > 76
Pseudomonas fluorescens FW300-N1B4 0.26 Pf1N1B4_4993 Arabinose efflux permease 0.26 Pf1N1B4_910 Cyanate transport protein CynX low > 87
Xanthomonas campestris pv. campestris strain 8004 0.25 Xcc-8004.371.1 transcriptional regulator 0.16 Xcc-8004.2329.1 MFS transporter low > 74

Not shown: 7 genomes with orthologs for HSERO_RS05365 only; 15 genomes with orthologs for HSERO_RS21180 only