Conservation of cofitness between HSERO_RS16725 and HSERO_RS18990 in Herbaspirillum seropedicae SmR1

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS16725 ABC transporter permease 1.0 HSERO_RS18990 pyrroline-5-carboxylate reductase 0.23 17
Cupriavidus basilensis FW507-4G11 0.84 RR42_RS18600 ABC transporter permease 0.53 RR42_RS17360 pyrroline-5-carboxylate reductase — —
Sinorhizobium meliloti 1021 0.73 SM_b20659 sugar uptake ABC transporter permease 0.31 SMc02677 pyrroline-5-carboxylate reductase low > 103
Rhodopseudomonas palustris CGA009 0.67 TX73_017955 sugar ABC transporter permease 0.33 TX73_022630 pyrroline-5-carboxylate reductase — —
Phaeobacter inhibens DSM 17395 0.29 PGA1_c16700 binding protein-dependent transport system, inner membrane component 0.28 PGA1_c24700 pyrroline-5-carboxylate reductase ProC low > 62
Rahnella sp. WP5 0.27 EX31_RS07050 sugar ABC transporter permease 0.32 EX31_RS02690 pyrroline-5-carboxylate reductase low > 89
Synechococcus elongatus PCC 7942 0.27 Synpcc7942_0949 permease protein of sugar ABC transporter 0.29 Synpcc7942_2058 proC pyrroline-5-carboxylate reductase — —
Serratia liquefaciens MT49 0.27 IAI46_11765 sugar ABC transporter permease 0.32 IAI46_21415 pyrroline-5-carboxylate reductase low > 86
Castellaniella sp019104865 MT123 0.26 ABCV34_RS07880 sugar ABC transporter permease 0.42 ABCV34_RS03610 pyrroline-5-carboxylate reductase low > 48
Pantoea sp. MT58 0.26 IAI47_20095 sugar ABC transporter permease 0.28 IAI47_14945 pyrroline-5-carboxylate reductase low > 76
Paraburkholderia bryophila 376MFSha3.1 0.25 H281DRAFT_03746 carbohydrate ABC transporter membrane protein 1, CUT1 family 0.53 H281DRAFT_04679 pyrroline-5-carboxylate reductase low > 103
Paraburkholderia sabiae LMG 24235 0.25 QEN71_RS15900 sugar ABC transporter permease 0.55 QEN71_RS26600 pyrroline-5-carboxylate reductase low > 153
Paraburkholderia graminis OAS925 0.24 ABIE53_004503 multiple sugar transport system permease protein 0.55 ABIE53_000840 pyrroline-5-carboxylate reductase low > 113
Burkholderia phytofirmans PsJN 0.24 BPHYT_RS35665 ABC transporter permease 0.54 BPHYT_RS03490 pyrroline-5-carboxylate reductase — —
Erwinia tracheiphila SCR3 0.24 LU632_RS00815 sugar ABC transporter permease 0.25 LU632_RS18995 proC pyrroline-5-carboxylate reductase low > 74
Hydrogenophaga sp. GW460-11-11-14-LB1 0.23 GFF4373 Maltose/maltodextrin ABC transporter, permease protein MalF 0.44 GFF2806 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) low > 90
Pseudomonas syringae pv. syringae B728a ΔmexB 0.22 Psyr_0761 carbohydrate ABC transporter membrane protein 1, CUT1 family 0.34 Psyr_0476 pyrroline-5-carboxylate reductase low > 86
Pseudomonas syringae pv. syringae B728a 0.22 Psyr_0761 carbohydrate ABC transporter membrane protein 1, CUT1 family 0.34 Psyr_0476 pyrroline-5-carboxylate reductase — —
Variovorax sp. OAS795 0.21 ABID97_RS29290 sugar ABC transporter permease 0.46 ABID97_RS01555 pyrroline-5-carboxylate reductase — —
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_1647 Maltose/maltodextrin ABC transporter, permease protein MalF 0.39 Pf6N2E2_4600 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) — —
Enterobacter asburiae PDN3 0.20 EX28DRAFT_0982 ABC-type sugar transport systems, permease components 0.27 EX28DRAFT_2585 pyrroline-5-carboxylate reductase low > 76
Pseudomonas fluorescens FW300-N2E3 0.19 AO353_25120 ABC transporter permease 0.39 AO353_08165 pyrroline-5-carboxylate reductase low > 101
Pectobacterium carotovorum WPP14 0.19 HER17_RS03520 sugar ABC transporter permease 0.30 HER17_RS03805 pyrroline-5-carboxylate reductase — —
Enterobacter sp. TBS_079 0.19 MPMX20_02466 Inner membrane ABC transporter permease protein YcjO 0.27 MPMX20_00976 Pyrroline-5-carboxylate reductase low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.19 OHPLBJKB_02371 Inner membrane ABC transporter permease protein YcjO 0.27 OHPLBJKB_03288 Pyrroline-5-carboxylate reductase low > 73
Escherichia fergusonii Becca 0.19 EFB2_02616 Inner membrane ABC transporter permease protein YcjO 0.27 EFB2_03670 Pyrroline-5-carboxylate reductase low > 86
Escherichia coli BL21 0.19 ECD_01288 putative sugar ABC transporter permease 0.27 ECD_00333 pyrroline-5-carboxylate reductase, NAD(P)-binding low > 61
Escherichia coli Nissle 1917 0.19 ECOLIN_RS07885 sugar ABC transporter permease 0.27 ECOLIN_RS02345 pyrroline-5-carboxylate reductase low > 55
Escherichia coli ECRC102 0.18 NIAGMN_26535 ugpA sugar ABC transporter permease 0.27 NIAGMN_06665 proC pyrroline-5-carboxylate reductase — —
Pseudomonas fluorescens FW300-N2C3 0.18 AO356_28575 ABC transporter permease 0.39 AO356_13420 pyrroline-5-carboxylate reductase — —
Escherichia coli BW25113 0.18 b1311 ycjO predicted sugar transporter subunit: membrane component of ABC superfamily (NCBI) 0.27 b0386 proC pyrroline-5-carboxylate reductase (NCBI) low > 76
Escherichia coli ECRC101 0.18 MCAODC_15905 ugpA sugar ABC transporter permease 0.27 MCAODC_27835 proC pyrroline-5-carboxylate reductase low > 87
Escherichia coli ECRC98 0.18 JDDGAC_04910 ugpA sugar ABC transporter permease 0.27 JDDGAC_12265 proC pyrroline-5-carboxylate reductase low > 86
Escherichia coli ECRC99 0.18 KEDOAH_26410 ugpA sugar ABC transporter permease 0.27 KEDOAH_19355 proC pyrroline-5-carboxylate reductase — —
Escherichia coli ECOR27 0.18 NOLOHH_20060 ugpA sugar ABC transporter permease 0.27 NOLOHH_01535 proC pyrroline-5-carboxylate reductase low > 75
Escherichia coli ECRC100 0.18 OKFHMN_02365 ugpA sugar ABC transporter permease 0.27 OKFHMN_08610 proC pyrroline-5-carboxylate reductase low > 80
Escherichia coli ECOR38 0.18 HEPCGN_25825 ugpA sugar ABC transporter permease 0.27 HEPCGN_07250 proC pyrroline-5-carboxylate reductase low > 87
Pseudomonas fluorescens FW300-N1B4 0.17 Pf1N1B4_5113 sucrose ABC transporter, permease component 1 (from data) 0.39 Pf1N1B4_2341 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) — —

Not shown: 5 genomes with orthologs for HSERO_RS16725 only; 55 genomes with orthologs for HSERO_RS18990 only