Conservation of cofitness between HSERO_RS05365 and HSERO_RS18195 in Herbaspirillum seropedicae SmR1

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS05365 transporter 1.0 HSERO_RS18195 XRE family transcriptional regulator 0.29 6
Lysobacter sp. OAE881 0.64 ABIE51_RS11010 MFS transporter 0.32 ABIE51_RS14590 response regulator transcription factor low > 62
Sinorhizobium meliloti 1021 0.50 SM_b20625 hypothetical protein 0.31 SM_b21520 two-component response regulator protein low > 103
Azospirillum sp. SherDot2 0.38 MPMX19_05305 Purine ribonucleoside efflux pump NepI 0.26 MPMX19_01247 Transcriptional regulatory protein DegU low > 112
Enterobacter sp. TBS_079 0.36 MPMX20_02689 Purine ribonucleoside efflux pump NepI 0.33 MPMX20_02618 Nitrate/nitrite response regulator protein NarL low > 85
Pectobacterium carotovorum WPP14 0.36 HER17_RS16845 MFS transporter 0.31 HER17_RS09760 two-component system response regulator NarL low > 75
Rahnella sp. WP5 0.35 EX31_RS02065 MFS transporter 0.28 EX31_RS06550 two-component system response regulator NarL low > 89
Enterobacter asburiae PDN3 0.34 EX28DRAFT_0776 Arabinose efflux permease 0.33 EX28DRAFT_0848 two component transcriptional regulator, LuxR family low > 76
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_29615 transporter 0.34 AO356_25185 hypothetical protein low > 104
Pantoea sp. MT58 0.34 IAI47_17680 MFS transporter 0.38 IAI47_04245 two-component system response regulator NarL low > 76
Variovorax sp. OAS795 0.34 ABID97_RS08210 MFS transporter 0.30 ABID97_RS28185 response regulator transcription factor low > 91
Klebsiella michiganensis M5al 0.33 BWI76_RS27765 MFS transporter 0.33 BWI76_RS17350 DNA-binding response regulator low > 92
Pseudomonas simiae WCS417 0.33 PS417_11060 transporter 0.35 PS417_15740 hypothetical protein low > 88
Dyella japonica UNC79MFTsu3.2 0.31 ABZR86_RS17780 MFS transporter 0.32 ABZR86_RS21335 response regulator transcription factor low > 74
Paraburkholderia graminis OAS925 0.30 ABIE53_005584 putative MFS family arabinose efflux permease 0.41 ABIE53_005345 two-component system nitrate/nitrite response regulator NarL — —
Escherichia coli BW25113 0.30 b3662 nepI predicted transporter (RefSeq) 0.33 b1221 narL DNA-binding response regulator in two-component regulatory system with NarX (or NarQ) (NCBI) low > 76
Escherichia coli ECRC62 0.30 BNILDI_04155 nepI purine ribonucleoside efflux pump NepI 0.33 BNILDI_18685 narX nitrate/nitrite two-component system sensor histidine kinase NarX low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.30 OHPLBJKB_00038 Purine ribonucleoside efflux pump NepI 0.33 OHPLBJKB_02463 Nitrate/nitrite response regulator protein NarL low > 73
Escherichia coli ECOR38 0.30 HEPCGN_13950 nepI purine ribonucleoside efflux pump NepI 0.33 HEPCGN_24980 narX nitrate/nitrite two-component system sensor histidine kinase NarX low > 87
Escherichia coli ECOR27 0.30 NOLOHH_07370 nepI purine ribonucleoside efflux pump NepI 0.33 NOLOHH_20535 narX nitrate/nitrite two-component system sensor histidine kinase NarX — —
Escherichia fergusonii Becca 0.30 EFB2_00038 Purine ribonucleoside efflux pump NepI 0.33 EFB2_02705 Nitrate/nitrite response regulator protein NarL low > 86
Escherichia coli ECRC100 0.30 OKFHMN_15230 nepI purine ribonucleoside efflux pump NepI 0.33 OKFHMN_28520 narX nitrate/nitrite two-component system sensor histidine kinase NarX — —
Escherichia coli Nissle 1917 0.30 ECOLIN_RS21125 purine ribonucleoside efflux pump NepI 0.33 ECOLIN_RS07375 two-component system response regulator NarL low > 55
Escherichia coli ECRC98 0.30 JDDGAC_18855 nepI purine ribonucleoside efflux pump NepI 0.33 JDDGAC_06055 narX nitrate/nitrite two-component system sensor histidine kinase NarX low > 86
Escherichia coli ECRC101 0.30 MCAODC_05740 nepI purine ribonucleoside efflux pump NepI 0.33 MCAODC_21740 narX nitrate/nitrite two-component system sensor histidine kinase NarX low > 87
Escherichia coli ECRC102 0.30 NIAGMN_12990 nepI purine ribonucleoside efflux pump NepI 0.33 NIAGMN_27715 narX nitrate/nitrite two-component system sensor histidine kinase NarX — —
Escherichia coli ECRC99 0.30 KEDOAH_12915 nepI purine ribonucleoside efflux pump NepI 0.33 KEDOAH_25515 narX nitrate/nitrite two-component system sensor histidine kinase NarX — —
Paraburkholderia sabiae LMG 24235 0.29 QEN71_RS13705 MFS transporter 0.39 QEN71_RS33915 two-component system response regulator NarL low > 153
Serratia liquefaciens MT49 0.29 IAI46_07000 MFS transporter 0.35 IAI46_18680 two-component system response regulator NarL low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.29 GFF318 Putative transport protein 0.33 GFF1492 Nitrate/nitrite response regulator protein — —
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_2246 Arabinose efflux permease 0.34 Pf6N2E2_725 Nitrate/nitrite response regulator protein low > 103
Pseudomonas sp. RS175 0.29 PFR28_01200 Purine ribonucleoside efflux pump NepI 0.34 PFR28_01628 Nitrate/nitrite response regulator protein NarL low > 88
Dickeya dianthicola 67-19 0.28 HGI48_RS08210 MFS transporter 0.35 HGI48_RS12040 two-component system response regulator NarL low > 71
Ralstonia solanacearum PSI07 0.27 RPSI07_RS04185 MFS transporter 0.68 RPSI07_RS06675 DNA-binding response regulator low > 81
Cupriavidus basilensis FW507-4G11 0.27 RR42_RS30495 transcriptional regulator 0.65 RR42_RS08760 XRE family transcriptional regulator — —
Pseudomonas syringae pv. syringae B728a 0.27 Psyr_3800 Major facilitator superfamily 0.32 Psyr_1940 regulatory protein, LuxR:Response regulator receiver — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.27 Psyr_3800 Major facilitator superfamily 0.32 Psyr_1940 regulatory protein, LuxR:Response regulator receiver — —
Ralstonia solanacearum GMI1000 0.27 RS_RS01025 MFS transporter 0.68 RS_RS21845 DNA-binding response regulator low > 80
Ralstonia solanacearum IBSBF1503 0.26 RALBFv3_RS20735 MFS transporter 0.68 RALBFv3_RS16770 DNA-binding response regulator low > 76
Pseudomonas fluorescens FW300-N1B4 0.26 Pf1N1B4_4993 Arabinose efflux permease 0.35 Pf1N1B4_5741 Nitrate/nitrite response regulator protein — —
Xanthomonas campestris pv. campestris strain 8004 0.25 Xcc-8004.371.1 transcriptional regulator 0.32 Xcc-8004.3859.1 Two-component system regulatory protein low > 74
Azospirillum brasilense Sp245 0.14 AZOBR_RS21030 MFS transporter 0.26 AZOBR_RS12455 transcriptional regulator low > 97

Not shown: 10 genomes with orthologs for HSERO_RS05365 only; 20 genomes with orthologs for HSERO_RS18195 only