Conservation of cofitness between HSERO_RS11215 and HSERO_RS16375 in Herbaspirillum seropedicae SmR1

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS11215 methionine sulfoxide reductase B 1.0 HSERO_RS16375 cupin 0.40 2
Castellaniella sp019104865 MT123 0.70 ABCV34_RS08520 peptide-methionine (R)-S-oxide reductase MsrB 0.43 ABCV34_RS00265 cupin domain-containing protein low > 48
Ralstonia sp. UNC404CL21Col 0.69 ABZR87_RS12635 peptide-methionine (R)-S-oxide reductase MsrB 0.48 ABZR87_RS10565 cupin domain-containing protein low > 80
Burkholderia phytofirmans PsJN 0.69 BPHYT_RS09545 peptide methionine sulfoxide reductase 0.51 BPHYT_RS12490 cupin low > 109
Paraburkholderia bryophila 376MFSha3.1 0.68 H281DRAFT_00913 peptide-methionine (R)-S-oxide reductase 0.50 H281DRAFT_00534 50S ribosomal protein L16 3-hydroxylase low > 103
Ralstonia solanacearum GMI1000 0.68 RS_RS08825 peptide-methionine (R)-S-oxide reductase 0.50 RS_RS05720 cupin domain-containing protein — —
Paraburkholderia graminis OAS925 0.68 ABIE53_002148 peptide-methionine (R)-S-oxide reductase 0.51 ABIE53_002722 50S ribosomal protein L16 3-hydroxylase low > 113
Ralstonia solanacearum IBSBF1503 0.67 RALBFv3_RS01185 peptide-methionine (R)-S-oxide reductase 0.50 RALBFv3_RS14905 cupin domain-containing protein — —
Ralstonia solanacearum UW163 0.67 UW163_RS14495 peptide-methionine (R)-S-oxide reductase 0.50 UW163_RS12375 cupin domain-containing protein — —
Lysobacter sp. OAE881 0.66 ABIE51_RS05405 peptide-methionine (R)-S-oxide reductase MsrB 0.29 ABIE51_RS09000 cupin domain-containing protein low > 62
Ralstonia solanacearum PSI07 0.66 RPSI07_RS16290 peptide-methionine (R)-S-oxide reductase 0.51 RPSI07_RS18455 cupin domain-containing protein low > 81
Cupriavidus basilensis FW507-4G11 0.66 RR42_RS11165 methionine sulfoxide reductase B 0.50 RR42_RS06270 cupin 0.24 35
Acinetobacter radioresistens SK82 0.60 MPMX26_01870 Peptide methionine sulfoxide reductase MsrB 0.24 MPMX26_01736 putative ribosomal oxygenase low > 36
Dyella japonica UNC79MFTsu3.2 0.60 ABZR86_RS11250 peptide-methionine (R)-S-oxide reductase MsrB 0.30 ABZR86_RS05910 cupin domain-containing protein low > 74
Acidovorax sp. GW101-3H11 0.60 Ac3H11_2535 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.48 Ac3H11_282 FIG074102: hypothetical protein low > 79
Variovorax sp. OAS795 0.59 ABID97_RS15695 peptide-methionine (R)-S-oxide reductase MsrB 0.45 ABID97_RS20150 cupin domain-containing protein low > 91
Variovorax sp. SCN45 0.59 GFF1329 Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12) 0.46 GFF2745 FIG074102: hypothetical protein low > 127
Pseudomonas sp. RS175 0.58 PFR28_00985 Peptide methionine sulfoxide reductase MsrB 0.32 PFR28_02622 50S ribosomal protein L16 3-hydroxylase — —
Pseudomonas fluorescens GW456-L13 0.58 PfGW456L13_2253 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.32 PfGW456L13_2636 FIG002776: hypothetical protein low > 87
Pseudomonas sp. S08-1 0.56 OH686_22580 Peptide-methionine (R)-S-oxide reductase MsrB 0.32 OH686_00190 hypothetical protein — —
Shewanella sp. ANA-3 0.54 Shewana3_4333 methionine-R-sulfoxide reductase (RefSeq) 0.25 Shewana3_1744 cupin 4 family protein (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.54 MIT1002_02396 Peptide methionine sulfoxide reductase MsrB 0.25 MIT1002_01824 50S ribosomal protein L16 arginine hydroxylase low > 70
Hydrogenophaga sp. GW460-11-11-14-LB1 0.53 GFF4579 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.46 GFF5569 FIG002776: hypothetical protein low > 90
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_01954 Peptide methionine sulfoxide reductase MsrB 0.27 OHPLBJKB_02540 50S ribosomal protein L16 3-hydroxylase low > 73
Enterobacter sp. TBS_079 0.52 MPMX20_01845 Peptide methionine sulfoxide reductase MsrB 0.27 MPMX20_00604 50S ribosomal protein L16 3-hydroxylase low > 85
Enterobacter asburiae PDN3 0.52 EX28DRAFT_1772 methionine-R-sulfoxide reductase 0.27 EX28DRAFT_3510 Uncharacterized conserved protein low > 76
Escherichia coli ECRC102 0.52 NIAGMN_01330 msrB Peptide methionine sulfoxide reductase MsrB 0.27 NIAGMN_24760 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase — —
Escherichia coli ECRC100 0.52 OKFHMN_26735 msrB Peptide methionine sulfoxide reductase MsrB 0.27 OKFHMN_00635 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase low > 80
Escherichia fergusonii Becca 0.52 EFB2_02216 Peptide methionine sulfoxide reductase MsrB 0.27 EFB2_02847 50S ribosomal protein L16 3-hydroxylase low > 86
Escherichia coli Nissle 1917 0.52 ECOLIN_RS09915 peptide-methionine (R)-S-oxide reductase MsrB 0.27 ECOLIN_RS06500 [50S ribosomal protein L16]-arginine 3-hydroxylase — —
Escherichia coli BW25113 0.52 b1778 yeaA methionine sulfoxide reductase B (NCBI) 0.27 b1128 ycfD orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECRC98 0.52 JDDGAC_01310 msrB Peptide methionine sulfoxide reductase MsrB 0.27 JDDGAC_06730 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase low > 86
Escherichia coli BL21 0.52 ECD_01747 methionine sulfoxide reductase B 0.27 ECD_01126 50S ribosomal protein L16 arginine hydroxylase; 2-oxoglutarate oxygenase low > 61
Escherichia coli ECRC101 0.52 MCAODC_18675 msrB Peptide methionine sulfoxide reductase MsrB 0.27 MCAODC_22450 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase low > 87
Escherichia coli ECOR38 0.52 HEPCGN_05125 msrB Peptide methionine sulfoxide reductase MsrB 0.27 HEPCGN_24085 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase low > 87
Escherichia coli ECRC62 0.52 BNILDI_16050 msrB Peptide methionine sulfoxide reductase MsrB 0.27 BNILDI_19090 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase low > 75
Escherichia coli ECOR27 0.52 NOLOHH_17265 msrB Peptide methionine sulfoxide reductase MsrB 0.27 NOLOHH_20925 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase low > 75
Escherichia coli ECRC99 0.52 KEDOAH_01375 msrB Peptide methionine sulfoxide reductase MsrB 0.27 KEDOAH_24720 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF3479 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.27 GFF3413 FIG002776: hypothetical protein low > 78
Marinobacter adhaerens HP15 0.51 HP15_3127 methionine sulfoxide reductase B 0.31 HP15_2089 cupin 4 family protein — —
Rahnella sp. WP5 0.50 EX31_RS06285 peptide-methionine (R)-S-oxide reductase MsrB 0.26 EX31_RS23850 cupin domain-containing protein low > 89
Klebsiella michiganensis M5al 0.49 BWI76_RS11515 peptide-methionine (R)-S-oxide reductase 0.26 BWI76_RS11270 50S ribosomal protein L16 arginine hydroxylase — —
Erwinia tracheiphila SCR3 0.49 LU632_RS12990 msrB peptide-methionine (R)-S-oxide reductase MsrB 0.26 LU632_RS14600 cupin domain-containing protein low > 74
Serratia liquefaciens MT49 0.49 IAI46_14350 peptide-methionine (R)-S-oxide reductase MsrB 0.26 IAI46_02005 cupin domain-containing protein low > 86
Pantoea sp. MT58 0.48 IAI47_08950 peptide-methionine (R)-S-oxide reductase MsrB 0.27 IAI47_11940 cupin domain-containing protein low > 76
Pectobacterium carotovorum WPP14 0.48 HER17_RS11125 peptide-methionine (R)-S-oxide reductase MsrB 0.26 HER17_RS19385 cupin domain-containing protein low > 75
Dickeya dianthicola ME23 0.45 DZA65_RS10755 peptide-methionine (R)-S-oxide reductase MsrB 0.27 DZA65_RS15735 cupin domain-containing protein low > 75
Dickeya dianthicola 67-19 0.45 HGI48_RS10280 peptide-methionine (R)-S-oxide reductase MsrB 0.27 HGI48_RS14985 cupin domain-containing protein low > 71
Dickeya dadantii 3937 0.44 DDA3937_RS10270 peptide-methionine (R)-S-oxide reductase MsrB 0.27 DDA3937_RS14865 cupin domain-containing protein low > 74

Not shown: 27 genomes with orthologs for HSERO_RS11215 only; 8 genomes with orthologs for HSERO_RS16375 only