| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Herbaspirillum seropedicae SmR1 | 1.0 | HSERO_RS15940 | | peptide ABC transporter substrate-binding protein | 1.0 | HSERO_RS14995 | | cystathionine beta-lyase | 0.50 | 2 |
| Ralstonia solanacearum PSI07 | 0.71 | RPSI07_RS03260 | | ABC transporter ATP-binding protein | 0.54 | RPSI07_RS16025 | | cystathionine beta-lyase | low | > 81 |
| Dickeya dianthicola ME23 | 0.66 | DZA65_RS02330 | | ABC transporter ATP-binding protein | 0.32 | DZA65_RS01785 | | cystathionine beta-lyase | low | > 75 |
| Dickeya dianthicola 67-19 | 0.66 | HGI48_RS02195 | | ABC transporter ATP-binding protein | 0.32 | HGI48_RS01710 | | cystathionine beta-lyase | low | > 71 |
| Dickeya dadantii 3937 | 0.66 | DDA3937_RS02240 | | ATP-binding cassette domain-containing protein | 0.32 | DDA3937_RS01815 | | cystathionine beta-lyase | 0.40 | 30 |
| Pseudomonas syringae pv. syringae B728a | 0.60 | Psyr_2264 | | Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal | 0.33 | Psyr_0607 | | cystathionine beta-lyase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.60 | Psyr_2264 | | Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal | 0.33 | Psyr_0607 | | cystathionine beta-lyase | low | > 86 |
| Azospirillum brasilense Sp245 | 0.54 | AZOBR_RS26235 | | peptide ABC transporter substrate-binding protein | 0.35 | AZOBR_RS08650 | | cystathionine beta-lyase | low | > 97 |
| Variovorax sp. SCN45 | 0.46 | GFF7020 | | ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) | 0.53 | GFF1012 | | Cystathionine beta-lyase (EC 4.4.1.8) | 0.50 | 83 |
| Enterobacter asburiae PDN3 | 0.46 | EX28DRAFT_2675 | | oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain | 0.33 | EX28DRAFT_3046 | | cystathionine beta-lyase, bacterial | low | > 76 |
| Variovorax sp. OAS795 | 0.45 | ABID97_RS04460 | | ABC transporter ATP-binding protein | 0.55 | ABID97_RS14295 | | cystathionine beta-lyase | low | > 91 |
| Rhodopseudomonas palustris CGA009 | 0.45 | TX73_007420 | | ABC transporter ATP-binding protein | 0.35 | TX73_013235 | | cystathionine beta-lyase | low | > 86 |
| Azospirillum sp. SherDot2 | 0.44 | MPMX19_04416 | | Dipeptide transport ATP-binding protein DppD | 0.34 | MPMX19_01339 | | Cystathionine beta-lyase MetC | 0.81 | 11 |
| Rhizobium sp. OAE497 | 0.44 | ABIE40_RS25755 | | ABC transporter ATP-binding protein | 0.34 | ABIE40_RS08820 | | cystathionine beta-lyase | low | > 107 |
| Enterobacter sp. TBS_079 | 0.44 | MPMX20_00903 | | Oligopeptide transport ATP-binding protein OppD | 0.33 | MPMX20_03852 | | Cystathionine beta-lyase MetC | low | > 85 |
| Paraburkholderia sabiae LMG 24235 | 0.44 | QEN71_RS31475 | | ABC transporter ATP-binding protein | 0.58 | QEN71_RS22165 | | cystathionine beta-lyase | low | > 153 |
| Cupriavidus basilensis FW507-4G11 | 0.43 | RR42_RS11230 | | peptide ABC transporter ATP-binding protein | 0.54 | RR42_RS07655 | | cystathionine beta-lyase | low | > 128 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.43 | H281DRAFT_01032 | | peptide/nickel transport system ATP-binding protein | 0.59 | H281DRAFT_00859 | | cystathionine beta-lyase | low | > 103 |
| Rahnella sp. WP5 | 0.43 | EX31_RS09170 | | ABC transporter ATP-binding protein | 0.32 | EX31_RS08025 | | cystathionine beta-lyase | low | > 89 |
| Acidovorax sp. GW101-3H11 | 0.43 | Ac3H11_4825 | | Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2) | 0.53 | Ac3H11_4146 | | Cystathionine beta-lyase (EC 4.4.1.8) | low | > 79 |
| Erwinia tracheiphila SCR3 | 0.42 | LU632_RS12865 | | ABC transporter ATP-binding protein | 0.30 | LU632_RS20545 | metC | cystathionine beta-lyase | low | > 74 |
| Vibrio cholerae E7946 ATCC 55056 | 0.42 | CSW01_05560 | | ABC transporter ATP-binding protein | 0.36 | CSW01_08400 | | cystathionine beta-lyase | low | > 62 |
| Rhodospirillum rubrum S1H | 0.42 | Rru_A0589 | | Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like (NCBI) | 0.36 | Rru_A1613 | | Cystathionine beta-lyase (NCBI) | low | > 58 |
| Escherichia coli ECOR38 | 0.42 | HEPCGN_26460 | dppD | ABC transporter ATP-binding protein | 0.31 | HEPCGN_17825 | metC | cystathionine beta-lyase | low | > 87 |
| Escherichia coli ECOR27 | 0.42 | NOLOHH_18975 | dppD | ABC transporter ATP-binding protein | 0.31 | NOLOHH_10735 | metC | cystathionine beta-lyase | low | > 75 |
| Escherichia coli BW25113 | 0.42 | b1484 | ddpD | D-ala-D-ala transporter subunit (NCBI) | 0.31 | b3008 | metC | cystathionine beta-lyase (NCBI) | low | > 76 |
| Escherichia coli BL21 | 0.42 | ECD_01442 | | D,D-dipeptide ABC transporter ATPase | 0.31 | ECD_02881 | | cystathionine beta-lyase, PLP-dependent | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.42 | OHPLBJKB_02233 | | putative D,D-dipeptide transport ATP-binding protein DdpD | 0.31 | OHPLBJKB_00693 | | Cystathionine beta-lyase MetC | low | > 73 |
| Escherichia coli ECRC100 | 0.42 | OKFHMN_01335 | dppD | ABC transporter ATP-binding protein | 0.31 | OKFHMN_18960 | metC | cystathionine beta-lyase | 0.71 | 16 |
| Escherichia coli ECRC98 | 0.42 | JDDGAC_03825 | dppD | ABC transporter ATP-binding protein | 0.31 | JDDGAC_22595 | metC | cystathionine beta-lyase | low | > 86 |
| Escherichia coli ECRC99 | 0.42 | KEDOAH_27105 | dppD | ABC transporter ATP-binding protein | 0.31 | KEDOAH_09185 | metC | cystathionine beta-lyase | — | — |
| Escherichia coli ECRC101 | 0.42 | MCAODC_16605 | dppD | ABC transporter ATP-binding protein | 0.31 | MCAODC_09475 | metC | cystathionine beta-lyase | low | > 87 |
| Escherichia coli ECRC102 | 0.42 | NIAGMN_25465 | dppD | ABC transporter ATP-binding protein | 0.31 | NIAGMN_16725 | metC | cystathionine beta-lyase | — | — |
| Escherichia coli ECRC62 | 0.41 | BNILDI_17460 | ddpD | putative D,D-dipeptide transport ATP-binding protein DdpD | 0.31 | BNILDI_00780 | metC | cystathionine beta-lyase | low | > 75 |
| Bosea sp. OAE506 | 0.41 | ABIE41_RS02275 | | ABC transporter ATP-binding protein | 0.38 | ABIE41_RS01480 | | cystathionine beta-lyase | low | > 77 |
| Pantoea sp. MT58 | 0.41 | IAI47_09085 | | ABC transporter ATP-binding protein | 0.31 | IAI47_03215 | | cystathionine beta-lyase | low | > 76 |
| Burkholderia phytofirmans PsJN | 0.40 | BPHYT_RS18675 | | peptide ABC transporter ATP-binding protein | 0.59 | BPHYT_RS09190 | | cystathionine beta-lyase | low | > 109 |
| Pectobacterium carotovorum WPP14 | 0.40 | HER17_RS00235 | | dipeptide ABC transporter ATP-binding protein | 0.31 | HER17_RS19690 | | cystathionine beta-lyase | low | > 75 |
| Pseudomonas fluorescens FW300-N2E3 | 0.39 | AO353_05405 | | peptide ABC transporter ATP-binding protein | 0.35 | AO353_24330 | | cystathionine beta-lyase | low | > 101 |
| Castellaniella sp019104865 MT123 | 0.39 | ABCV34_RS11095 | | ABC transporter ATP-binding protein | 0.30 | ABCV34_RS12385 | | PLP-dependent aspartate aminotransferase family protein | low | > 48 |
| Shewanella loihica PV-4 | 0.31 | Shew_2501 | | oligopeptide/dipeptide ABC transporter, ATPase subunit (RefSeq) | 0.34 | Shew_1789 | | cystathionine beta-lyase (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.31 | SO1802 | sapD | peptide ABC transporter, ATP-binding protein (NCBI ptt file) | 0.36 | SO2191 | metC | cystathionine beta-lyase (NCBI ptt file) | — | — |
| Shewanella sp. ANA-3 | 0.31 | Shewana3_2653 | | oligopeptide/dipeptide ABC transporter, ATPase subunit (RefSeq) | 0.36 | Shewana3_2414 | | cystathionine beta-lyase (RefSeq) | — | — |
| Shewanella amazonensis SB2B | 0.30 | Sama_1232 | | peptide ABC transporter, ATP-binding protein (RefSeq) | 0.35 | Sama_2008 | | cystathionine beta-lyase (RefSeq) | low | > 62 |
Not shown: 14 genomes with orthologs for HSERO_RS15940 only; 19 genomes with orthologs for HSERO_RS14995 only