Conservation of cofitness between HSERO_RS16540 and HSERO_RS12550 in Herbaspirillum seropedicae SmR1

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS16540 membrane protein 1.0 HSERO_RS12550 D-lactate dehydrogenase 0.35 11
Burkholderia phytofirmans PsJN 0.61 BPHYT_RS13730 membrane protein 0.52 BPHYT_RS03835 D-lactate dehydrogenase low > 109
Ralstonia solanacearum UW163 0.60 UW163_RS15190 DUF962 domain-containing protein 0.53 UW163_RS05795 2-hydroxyacid dehydrogenase — —
Ralstonia solanacearum GMI1000 0.60 RS_RS07855 DUF962 domain-containing protein 0.51 RS_RS15730 2-hydroxyacid dehydrogenase low > 80
Ralstonia solanacearum IBSBF1503 0.60 RALBFv3_RS01880 DUF962 domain-containing protein 0.53 RALBFv3_RS07830 2-hydroxyacid dehydrogenase low > 76
Paraburkholderia graminis OAS925 0.59 ABIE53_002921 hypothetical protein 0.54 ABIE53_006385 D-lactate dehydrogenase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.59 H281DRAFT_04484 hypothetical protein 0.55 H281DRAFT_01850 D-lactate dehydrogenase — —
Ralstonia solanacearum PSI07 0.59 RPSI07_RS15610 DUF962 domain-containing protein 0.50 RPSI07_RS09445 2-hydroxyacid dehydrogenase low > 81
Paraburkholderia sabiae LMG 24235 0.58 QEN71_RS05190 DUF962 domain-containing protein 0.51 QEN71_RS26130 2-hydroxyacid dehydrogenase low > 153
Ralstonia sp. UNC404CL21Col 0.58 ABZR87_RS13820 Mpo1-like protein 0.51 ABZR87_RS03505 2-hydroxyacid dehydrogenase low > 80
Pseudomonas stutzeri RCH2 0.53 Psest_1876 Predicted membrane protein 0.53 Psest_4064 Lactate dehydrogenase and related dehydrogenases low > 67
Alteromonas macleodii MIT1002 0.52 MIT1002_00528 putative membrane protein 0.45 MIT1002_01974 D-lactate dehydrogenase low > 70
Shewanella oneidensis MR-1 0.52 SO1615 conserved hypothetical protein (NCBI ptt file) 0.47 SO0968 ldhA D-lactate dehydrogenase (NCBI ptt file) 0.20 45
Pseudomonas sp. RS175 0.51 PFR28_00796 hypothetical protein 0.52 PFR28_03228 D-lactate dehydrogenase low > 88
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_3541 FIG027190: Putative transmembrane protein 0.53 Pf1N1B4_3500 D-lactate dehydrogenase (EC 1.1.1.28) low > 87
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_04005 hypothetical protein 0.54 AO356_19040 hydroxyacid dehydrogenase low > 104
Pseudomonas fluorescens FW300-N2E2 0.51 Pf6N2E2_2636 FIG027190: Putative transmembrane protein 0.54 Pf6N2E2_5719 D-lactate dehydrogenase (EC 1.1.1.28) 0.18 72
Pseudomonas sp. S08-1 0.51 OH686_20740 hypothetical protein 0.48 OH686_18940 D-lactate dehydrogenase low > 80
Pseudomonas fluorescens GW456-L13 0.49 PfGW456L13_4415 FIG027190: Putative transmembrane protein 0.53 PfGW456L13_2028 D-lactate dehydrogenase (EC 1.1.1.28) low > 87
Pedobacter sp. GW460-11-11-14-LB5 0.47 CA265_RS11600 DUF962 domain-containing protein 0.47 CA265_RS10420 hydroxyacid dehydrogenase low > 88
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_18470 hypothetical protein 0.53 AO353_02740 hydroxyacid dehydrogenase low > 101
Pseudomonas fluorescens SBW25 0.47 PFLU_RS23840 DUF962 domain-containing protein 0.50 PFLU_RS18415 2-hydroxyacid dehydrogenase low > 109
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS23840 DUF962 domain-containing protein 0.50 PFLU_RS18415 2-hydroxyacid dehydrogenase low > 109
Pseudomonas simiae WCS417 0.47 PS417_22215 membrane protein 0.52 PS417_16375 2-hydroxyacid dehydrogenase low > 88
Shewanella sp. ANA-3 0.46 Shewana3_2828 hypothetical protein (RefSeq) 0.47 Shewana3_3319 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (RefSeq) — —
Pseudomonas putida KT2440 0.46 PP_4509 conserved protein of unknown function 0.55 PP_1649 D-lactate dehydrogenase low > 96
Pontibacter actiniarum KMM 6156, DSM 19842 0.45 CA264_16905 hypothetical protein 0.50 CA264_08545 2-hydroxyacid dehydrogenase low > 74
Shewanella amazonensis SB2B 0.45 Sama_1127 hypothetical protein (RefSeq) 0.47 Sama_0612 D-lactate dehydrogenase (RefSeq) low > 62
Shewanella loihica PV-4 0.42 Shew_2647 hypothetical protein (RefSeq) 0.45 Shew_0787 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (RefSeq) — —
Sphingomonas koreensis DSMZ 15582 0.38 Ga0059261_3450 Predicted membrane protein 0.55 Ga0059261_0219 Lactate dehydrogenase and related dehydrogenases low > 68

Not shown: 15 genomes with orthologs for HSERO_RS16540 only; 34 genomes with orthologs for HSERO_RS12550 only