Conservation of cofitness between HSERO_RS09800 and HSERO_RS09795 in Herbaspirillum seropedicae SmR1

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS09800 hypothetical protein 1.0 HSERO_RS09795 carbon starvation protein A 0.33 15
Ralstonia sp. UNC404CL21Col 0.64 ABZR87_RS05215 YbdD/YjiX family protein 0.78 ABZR87_RS05220 carbon starvation CstA family protein low > 80
Ralstonia solanacearum GMI1000 0.64 RS_RS00115 DUF466 domain-containing protein 0.76 RS_RS00110 carbon starvation protein A 0.95 1
Dickeya dadantii 3937 0.63 DDA3937_RS16355 YbdD/YjiX family protein 0.65 DDA3937_RS12500 carbon starvation protein A — —
Ralstonia solanacearum PSI07 0.61 RPSI07_RS23835 DUF466 domain-containing protein 0.76 RPSI07_RS23840 carbon starvation protein A 0.72 13
Ralstonia solanacearum UW163 0.61 UW163_RS04065 DUF466 domain-containing protein 0.76 UW163_RS04070 carbon starvation protein A — —
Ralstonia solanacearum IBSBF1503 0.61 RALBFv3_RS09515 DUF466 domain-containing protein 0.76 RALBFv3_RS09510 carbon starvation protein A low > 76
Pseudomonas putida KT2440 0.61 PP_4640 conserved protein of unknown function 0.71 PP_4641 putative transporter 0.74 1
Escherichia coli ECRC98 0.61 JDDGAC_11190 ybdD Uncharacterized protein YbdD 0.68 JDDGAC_11195 cstA pyruvate/proton symporter CstA low > 86
Escherichia coli ECRC99 0.61 KEDOAH_20425 ybdD Uncharacterized protein YbdD 0.68 KEDOAH_20420 cstA pyruvate/proton symporter CstA — —
Escherichia coli ECRC62 0.61 BNILDI_21930 ybdD Uncharacterized protein YbdD 0.68 BNILDI_21935 cstA pyruvate/proton symporter CstA low > 75
Escherichia coli ECRC100 0.61 OKFHMN_07545 ybdD Uncharacterized protein YbdD 0.68 OKFHMN_07550 cstA pyruvate/proton symporter CstA low > 80
Escherichia coli ECRC101 0.61 MCAODC_26760 ybdD Uncharacterized protein YbdD 0.68 MCAODC_26765 cstA pyruvate/proton symporter CstA low > 87
Escherichia coli BL21 0.61 ECD_00566 DUF466 family protein 0.62 ECD_04220 putative transporter low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.61 OHPLBJKB_03107 hypothetical protein 0.68 OHPLBJKB_03108 Peptide transporter CstA low > 73
Escherichia coli ECRC102 0.61 NIAGMN_05600 ybdD Uncharacterized protein YbdD 0.68 NIAGMN_05605 cstA pyruvate/proton symporter CstA — —
Pseudomonas sp. S08-1 0.61 OH686_16215 Uncharacterized YbdD and YjiX 0.69 OH686_16210 Carbon starvation protein A 0.60 25
Escherichia fergusonii Becca 0.61 EFB2_03493 hypothetical protein 0.68 EFB2_03494 Peptide transporter CstA low > 86
Escherichia coli ECOR27 0.61 NOLOHH_23920 ybdD Uncharacterized protein YbdD 0.68 NOLOHH_23925 cstA pyruvate/proton symporter CstA low > 75
Escherichia coli BW25113 0.61 b4512 ybdD hypothetical protein (NCBI) 0.68 b0598 cstA carbon starvation protein (NCBI) — —
Escherichia coli Nissle 1917 0.61 ECOLIN_RS03285 YbdD/YjiX family protein 0.68 ECOLIN_RS03280 pyruvate/proton symporter CstA — —
Escherichia coli ECOR38 0.61 HEPCGN_00735 ybdD Uncharacterized protein YbdD 0.68 HEPCGN_00730 cstA pyruvate/proton symporter CstA low > 87
Pseudomonas fluorescens GW456-L13 0.61 PfGW456L13_1445 COG2879, Hypothetical small protein yjiX 0.69 PfGW456L13_1444 Carbon starvation protein A 0.62 1
Pseudomonas fluorescens FW300-N1B4 0.61 Pf1N1B4_2772 COG2879, Hypothetical small protein yjiX 0.71 Pf1N1B4_4835 Carbon starvation protein A low > 87
Pseudomonas fluorescens FW300-N2E3 0.60 AO353_13995 hypothetical protein 0.70 AO353_25255 large subunit of pyruvate transporter (CstA) (from data) low > 101
Klebsiella michiganensis M5al 0.59 BWI76_RS03815 hypothetical protein 0.68 BWI76_RS07775 carbon starvation protein A low > 92
Pseudomonas fluorescens FW300-N2E2 0.59 Pf6N2E2_5079 COG2879, Hypothetical small protein yjiX 0.70 Pf6N2E2_1294 Carbon starvation protein A — —
Dickeya dianthicola 67-19 0.59 HGI48_RS16455 YbdD/YjiX family protein 0.65 HGI48_RS12555 carbon starvation protein A low > 71
Dickeya dianthicola ME23 0.59 DZA65_RS17540 YbdD/YjiX family protein 0.66 DZA65_RS13005 carbon starvation protein A low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF4506 COG2879, Hypothetical small protein yjiX 0.67 GFF4505 Carbon starvation protein A low > 78
Pectobacterium carotovorum WPP14 0.59 HER17_RS15650 YbdD/YjiX family protein 0.66 HER17_RS09410 carbon starvation protein A low > 75
Pseudomonas fluorescens FW300-N2C3 0.59 AO356_15695 hypothetical protein 0.70 AO356_25680 carbon starvation protein A — —
Rahnella sp. WP5 0.59 EX31_RS00790 YbdD/YjiX family protein 0.67 EX31_RS17455 carbon starvation protein A low > 89
Enterobacter asburiae PDN3 0.58 EX28DRAFT_3535 Uncharacterized small protein 0.68 EX28DRAFT_2369 Carbon starvation protein, predicted membrane protein low > 76
Rhodospirillum rubrum S1H 0.58 Rru_A0260 Protein of unknown function DUF466 (NCBI) 0.67 Rru_A0259 Carbon starvation protein CstA (NCBI) 0.90 1
Pseudomonas syringae pv. syringae B728a ΔmexB 0.58 Psyr_4272 Protein of unknown function DUF466 0.71 Psyr_4273 Carbon starvation protein CstA low > 86
Pseudomonas syringae pv. syringae B728a 0.58 Psyr_4272 Protein of unknown function DUF466 0.71 Psyr_4273 Carbon starvation protein CstA low > 86
Pseudomonas sp. RS175 0.58 PFR28_03789 hypothetical protein 0.70 PFR28_01620 Pyruvate/proton symporter BtsT — —
Erwinia tracheiphila SCR3 0.57 LU632_RS20445 YbdD/YjiX family protein 0.60 LU632_RS20450 carbon starvation protein A low > 74
Pseudomonas simiae WCS417 0.57 PS417_24290 hypothetical protein 0.70 PS417_24295 carbon starvation protein A 0.43 2
Cupriavidus basilensis FW507-4G11 0.57 RR42_RS20510 small component of pyruvate transporter (ybdD-like) (from data) 0.77 RR42_RS20515 large component of pyruvate transporter (cstA-like) (from data) 0.86 1
Pseudomonas fluorescens SBW25 0.56 PFLU_RS26205 YbdD/YjiX family protein 0.70 PFLU_RS26210 carbon starvation protein A low > 109
Serratia liquefaciens MT49 0.56 IAI46_02545 YbdD/YjiX family protein 0.66 IAI46_13875 carbon starvation protein A low > 86
Pseudomonas fluorescens SBW25-INTG 0.56 PFLU_RS26205 YbdD/YjiX family protein 0.70 PFLU_RS26210 carbon starvation protein A 0.97 1
Variovorax sp. SCN45 0.55 GFF1738 Uncharacterized proteins YbdD and YjiX 0.75 GFF1737 Carbon starvation protein A low > 127
Paraburkholderia sabiae LMG 24235 0.55 QEN71_RS32875 YbdD/YjiX family protein 0.77 QEN71_RS32880 carbon starvation CstA family protein low > 153
Variovorax sp. OAS795 0.54 ABID97_RS22450 YbdD/YjiX family protein 0.75 ABID97_RS22455 carbon starvation CstA family protein 0.75 2
Rhodanobacter denitrificans FW104-10B01 0.51 LRK54_RS04690 YbdD/YjiX family protein 0.58 LRK54_RS04665 carbon starvation protein A low > 59
Rhodanobacter denitrificans MT42 0.51 LRK55_RS04470 YbdD/YjiX family protein 0.58 LRK55_RS04445 carbon starvation CstA family protein low > 63
Dyella japonica UNC79MFTsu3.2 0.49 ABZR86_RS19265 YbdD/YjiX family protein 0.60 ABZR86_RS19270 carbon starvation CstA family protein 0.94 1
Rhodanobacter sp. FW510-T8 0.49 OKGIIK_11480 DUF466 domain-containing protein 0.60 OKGIIK_11475 cstA Carbon starvation protein CstA (peptide/pyruvate transporter) low > 52
Azospirillum brasilense Sp245 0.44 AZOBR_RS18100 hypothetical protein 0.73 AZOBR_RS18105 carbon starvation protein A low > 97

Not shown: 0 genomes with orthologs for HSERO_RS09800 only; 14 genomes with orthologs for HSERO_RS09795 only