Conservation of cofitness between HSERO_RS12500 and HSERO_RS09475 in Herbaspirillum seropedicae SmR1

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS12500 malto-oligosyltrehalose trehalohydrolase 1.0 HSERO_RS09475 Fis family transcriptional regulator 0.38 19
Ralstonia sp. UNC404CL21Col 0.53 ABZR87_RS17205 malto-oligosyltrehalose trehalohydrolase 0.49 ABZR87_RS15930 sigma-54-dependent Fis family transcriptional regulator low > 80
Ralstonia solanacearum PSI07 0.49 RPSI07_RS00875 malto-oligosyltrehalose trehalohydrolase 0.25 RPSI07_RS09460 sigma-54-dependent Fis family transcriptional regulator low > 81
Ralstonia solanacearum IBSBF1503 0.49 RALBFv3_RS22315 malto-oligosyltrehalose trehalohydrolase 0.24 RALBFv3_RS07820 sigma-54-dependent Fis family transcriptional regulator low > 76
Ralstonia solanacearum GMI1000 0.49 RS_RS18295 malto-oligosyltrehalose trehalohydrolase 0.18 RS_RS15720 sigma-54-dependent Fis family transcriptional regulator low > 80
Pseudomonas fluorescens FW300-N2E2 0.49 Pf6N2E2_1077 Malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141) 0.27 Pf6N2E2_102 sigma-54 dependent transcriptional regulator low > 103
Pseudomonas fluorescens GW456-L13 0.49 PfGW456L13_3246 Malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141) 0.30 PfGW456L13_2355 sigma-54 dependent transcriptional regulator low > 87
Pseudomonas fluorescens FW300-N2E3 0.49 AO353_23770 malto-oligosyltrehalose trehalohydrolase 0.30 AO353_19490 Fis family transcriptional regulator low > 101
Pseudomonas sp. RS175 0.48 PFR28_02146 1,4-alpha-glucan branching enzyme GlgB 0.27 PFR28_02793 Acetoin catabolism regulatory protein low > 88
Pseudomonas stutzeri RCH2 0.48 Psest_2171 malto-oligosyltrehalose trehalohydrolase 0.26 Psest_2888 Transcriptional activator of acetoin/glycerol metabolism low > 67
Pseudomonas fluorescens FW300-N1B4 0.48 Pf1N1B4_4686 Malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141) 0.30 Pf1N1B4_175 sigma-54 dependent transcriptional regulator low > 87
Pseudomonas fluorescens FW300-N2C3 0.48 AO356_26020 malto-oligosyltrehalose trehalohydrolase 0.28 AO356_21605 Fis family transcriptional regulator low > 104
Paraburkholderia graminis OAS925 0.47 ABIE53_004824 maltooligosyltrehalose trehalohydrolase 0.47 ABIE53_004383 transcriptional regulator of acetoin/glycerol metabolism low > 113
Burkholderia phytofirmans PsJN 0.47 BPHYT_RS33790 malto-oligosyltrehalose trehalohydrolase 0.44 BPHYT_RS28085 Fis family transcriptional regulator low > 109
Paraburkholderia bryophila 376MFSha3.1 0.47 H281DRAFT_06052 maltooligosyl trehalose hydrolase 0.47 H281DRAFT_00325 GAF modulated sigma54 specific transcriptional regulator, Fis family low > 103
Pseudomonas sp. S08-1 0.47 OH686_01285 malto-oligosyltrehalose trehalohydrolase 0.28 OH686_03705 sigma-54-dependent transcriptional regulator low > 80
Pseudomonas syringae pv. syringae B728a 0.47 Psyr_2993 maltooligosyl trehalose hydrolase 0.28 Psyr_1736 Helix-turn-helix, Fis-type low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.47 Psyr_2993 maltooligosyl trehalose hydrolase 0.28 Psyr_1736 Helix-turn-helix, Fis-type low > 86
Pseudomonas simiae WCS417 0.46 PS417_14485 malto-oligosyltrehalose trehalohydrolase 0.28 PS417_16245 Fis family transcriptional regulator low > 88
Pseudomonas putida KT2440 0.46 PP_4051 malto-oligosyltrehalose trehalohydrolase 0.28 PP_3467 Sigma-54 dependent transcriptional regulator low > 96
Pseudomonas fluorescens SBW25 0.46 PFLU_RS16415 malto-oligosyltrehalose trehalohydrolase 0.28 PFLU_RS18275 sigma-54-dependent Fis family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS16415 malto-oligosyltrehalose trehalohydrolase 0.28 PFLU_RS18275 sigma-54-dependent Fis family transcriptional regulator low > 109
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS17720 malto-oligosyltrehalose trehalohydrolase 0.46 QEN71_RS30230 sigma-54-dependent Fis family transcriptional regulator low > 153
Rhodospirillum rubrum S1H 0.43 Rru_A0506 Glycoside hydrolase (NCBI) 0.33 Rru_A0932 Sigma54 Specific Transcriptional Regulator containing GAF, and Fis DNA-binding domains (NCBI) low > 58
Xanthomonas campestris pv. campestris strain 8004 0.41 Xcc-8004.540.1 Malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141) 0.26 Xcc-8004.877.1 hypothetical protein low > 74
Variovorax sp. SCN45 0.40 GFF771 Malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141) 0.26 GFF6444 no description low > 127
Variovorax sp. OAS795 0.38 ABID97_RS12160 malto-oligosyltrehalose trehalohydrolase 0.45 ABID97_RS15005 sigma-54-dependent Fis family transcriptional regulator low > 91
Rhodopseudomonas palustris CGA009 0.37 TX73_018895 malto-oligosyltrehalose trehalohydrolase 0.18 TX73_006200 sigma-54-dependent Fis family transcriptional regulator low > 86
Klebsiella michiganensis M5al 0.33 BWI76_RS14130 malto-oligosyltrehalose trehalohydrolase 0.26 BWI76_RS21990 ATPase AAA low > 92
Sinorhizobium meliloti 1021 0.32 SM_b21447 1,4-alpha-glucan-branching protein 0.20 SM_b20102 acetoin catabolism regulatory protein low > 103
Agrobacterium fabrum C58 0.31 Atu5284 alpha-amylase 0.20 Atu4741 transcriptional regulator — —

Not shown: 10 genomes with orthologs for HSERO_RS12500 only; 11 genomes with orthologs for HSERO_RS09475 only