Conservation of cofitness between HSERO_RS21375 and HSERO_RS08285 in Herbaspirillum seropedicae SmR1

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS21375 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 1.0 HSERO_RS08285 amino acid ABC transporter ATP-binding protein 0.31 12
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS18480 SAM-dependent methyltransferase 0.77 RR42_RS14410 leucine/isoleucine/valine transporter ATP-binding subunit
Castellaniella sp019104865 MT123 0.44 ABCV34_RS14060 peptide chain release factor N(5)-glutamine methyltransferase 0.72 ABCV34_RS03630 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG
Erwinia tracheiphila SCR3 0.43 LU632_RS10740 prmC peptide chain release factor N(5)-glutamine methyltransferase 0.64 LU632_RS19240 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG
Serratia liquefaciens MT49 0.42 IAI46_10285 peptide chain release factor N(5)-glutamine methyltransferase 0.62 IAI46_00975 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG low > 86
Pectobacterium carotovorum WPP14 0.42 HER17_RS10485 peptide chain release factor N(5)-glutamine methyltransferase 0.62 HER17_RS00510 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG low > 75
Pseudomonas putida KT2440 0.42 PP_0734 release factor-(glutamine-N5) methyltransferase 0.67 PP_1138 branched chain amino acid transporter - ATP binding subunit
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_0950 [protein release factor]-glutamine N5-methyltransferase 0.65 Psyr_3848 L-valine ABC transporter ATP-binding protein / L-isoleucine ABC transporter ATP-binding protein / L-leucine ABC transporter ATP-binding protein
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_14790 protein-(glutamine-N5) methyltransferase, release factor-specific 0.66 AO353_17110 ABC transporter ATP-binding protein
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_0950 [protein release factor]-glutamine N5-methyltransferase 0.65 Psyr_3848 L-valine ABC transporter ATP-binding protein / L-isoleucine ABC transporter ATP-binding protein / L-leucine ABC transporter ATP-binding protein low > 86
Pseudomonas fluorescens FW300-N2C3 0.42 AO356_16500 protein-(glutamine-N5) methyltransferase, release factor-specific 0.69 AO356_05335 ABC transporter ATP-binding protein
Dickeya dianthicola 67-19 0.42 HGI48_RS10935 peptide chain release factor N(5)-glutamine methyltransferase 0.62 HGI48_RS20715 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG
Pseudomonas fluorescens FW300-N1B4 0.42 Pf1N1B4_2920 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 0.67 Pf1N1B4_3215 Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1)
Pseudomonas stutzeri RCH2 0.42 Psest_1114 protein-(glutamine-N5) methyltransferase, release factor-specific 0.67 Psest_1309 ABC-type branched-chain amino acid transport systems, ATPase component
Enterobacter asburiae PDN3 0.41 EX28DRAFT_0831 protein-(glutamine-N5) methyltransferase, release factor-specific 0.63 EX28DRAFT_4287 ABC-type branched-chain amino acid transport systems, ATPase component
Enterobacter sp. TBS_079 0.41 MPMX20_02635 Release factor glutamine methyltransferase 0.62 MPMX20_04331 Lipopolysaccharide export system ATP-binding protein LptB low > 85
Pseudomonas sp. RS175 0.41 PFR28_03654 Release factor glutamine methyltransferase 0.67 PFR28_00537 Lipopolysaccharide export system ATP-binding protein LptB
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_5222 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 0.69 Pf6N2E2_2925 ABC transporter for L-leucine/L-isoleucine/L-phenylalanine/D-alanine, ATPase component 1 LivG (from data)
Dickeya dadantii 3937 0.41 DDA3937_RS10985 peptide chain release factor N(5)-glutamine methyltransferase 0.62 DDA3937_RS00675 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG low > 74
Pseudomonas sp. S08-1 0.40 OH686_07905 protein-(glutamine-N5) methyltransferase, release factor-specific 0.67 OH686_04620 Branched-chain amino acid ABC transporter, ATP-binding protein LivG low > 80
Escherichia coli ECOR38 0.40 HEPCGN_24920 prmC peptide chain release factor N(5)-glutamine methyltransferase 0.62 HEPCGN_15575 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG low > 87
Escherichia coli BL21 0.40 ECD_01187 RF-1 and RF-2 N5-glutamine methyltransferase 0.62 ECD_03304 branched-chain amino acid ABC transporter ATPase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.40 GFF2773 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 0.63 GFF551 Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) low > 78
Rahnella sp. WP5 0.39 EX31_RS07310 peptide chain release factor N(5)-glutamine methyltransferase 0.61 EX31_RS14790 ABC transporter ATP-binding protein
Escherichia coli ECRC99 0.39 KEDOAH_25450 prmC peptide chain release factor N(5)-glutamine methyltransferase 0.62 KEDOAH_11385 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG
Escherichia coli ECRC101 0.39 MCAODC_21805 prmC peptide chain release factor N(5)-glutamine methyltransferase 0.62 MCAODC_07285 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG
Escherichia coli ECRC100 0.39 OKFHMN_28455 prmC peptide chain release factor N(5)-glutamine methyltransferase 0.62 OKFHMN_16755 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG
Escherichia coli Nissle 1917 0.39 ECOLIN_RS07325 peptide chain release factor N(5)-glutamine methyltransferase 0.63 ECOLIN_RS19760 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG
Escherichia coli ECRC102 0.39 NIAGMN_27780 prmC peptide chain release factor N(5)-glutamine methyltransferase 0.62 NIAGMN_14525 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG
Escherichia fergusonii Becca 0.39 EFB2_02715 Release factor glutamine methyltransferase 0.62 EFB2_00367 Lipopolysaccharide export system ATP-binding protein LptB
Escherichia coli ECRC98 0.39 JDDGAC_06120 prmC peptide chain release factor N(5)-glutamine methyltransferase 0.62 JDDGAC_20385 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG low > 86
Pseudomonas fluorescens SBW25 0.39 PFLU_RS03660 peptide chain release factor N(5)-glutamine methyltransferase 0.67 PFLU_RS06630 ABC transporter ATP-binding protein
Marinobacter adhaerens HP15 0.39 HP15_713 modification methylase, HemK family 0.70 HP15_3058 leucine/isoleucine/valine transporter ATP-binding subunit
Pseudomonas fluorescens SBW25-INTG 0.39 PFLU_RS03660 peptide chain release factor N(5)-glutamine methyltransferase 0.67 PFLU_RS06630 ABC transporter ATP-binding protein
Klebsiella michiganensis M5al 0.39 BWI76_RS17430 protein-(glutamine-N5) methyltransferase, release factor-specific 0.63 BWI76_RS26335 ABC transporter ATP-binding protein
Variovorax sp. OAS795 0.39 ABID97_RS07185 peptide chain release factor N(5)-glutamine methyltransferase 0.52 ABID97_RS27570 ABC transporter ATP-binding protein
Escherichia coli BW25113 0.39 b1212 prmC N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase (NCBI) 0.62 b3455 livG leucine/isoleucine/valine transporter subunit (NCBI)
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_02475 Release factor glutamine methyltransferase 0.62 OHPLBJKB_00248 Lipopolysaccharide export system ATP-binding protein LptB low > 73
Escherichia coli ECRC62 0.39 BNILDI_18760 prmC peptide chain release factor N(5)-glutamine methyltransferase 0.62 BNILDI_02955 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG low > 75
Escherichia coli ECOR27 0.38 NOLOHH_20605 prmC peptide chain release factor N(5)-glutamine methyltransferase 0.62 NOLOHH_08550 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG
Pseudomonas fluorescens GW456-L13 0.38 PfGW456L13_1583 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 0.68 PfGW456L13_4610 Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1)
Pseudomonas simiae WCS417 0.38 PS417_03610 SAM-dependent methyltransferase 0.68 PS417_06600 leucine/isoleucine/valine transporter ATP-binding subunit
Pantoea sp. MT58 0.37 IAI47_11265 peptide chain release factor N(5)-glutamine methyltransferase 0.63 IAI47_01580 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG
Rhodopseudomonas palustris CGA009 0.28 TX73_003140 peptide chain release factor N(5)-glutamine methyltransferase 0.50 TX73_019720 ABC transporter ATP-binding protein
Azospirillum brasilense Sp245 0.27 AZOBR_RS18930 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 0.52 AZOBR_RS08245 L-proline and D-alanine ABC transporter, ATPase component 1 (from data)
Azospirillum sp. SherDot2 0.25 MPMX19_02446 Release factor glutamine methyltransferase 0.52 MPMX19_05498 Lipopolysaccharide export system ATP-binding protein LptB
Rhizobium sp. OAE497 0.25 ABIE40_RS17290 peptide chain release factor N(5)-glutamine methyltransferase 0.49 ABIE40_RS14705 ABC transporter ATP-binding protein low > 107
Sinorhizobium meliloti 1021 0.24 SMc02435 methyltransferase 0.50 SMc01949 high-affinity branched-chain amino acid ABC transporter ATP-binding protein low > 103
Agrobacterium fabrum C58 0.24 Atu4175 protoporphyrinogen oxidase 0.49 Atu2425 ABC transporter, nucleotide binding/ATPase protein
Magnetospirillum magneticum AMB-1 0.23 AMB_RS08180 peptide chain release factor N(5)-glutamine methyltransferase 0.51 AMB_RS09125 ABC transporter ATP-binding protein

Not shown: 43 genomes with orthologs for HSERO_RS21375 only; 2 genomes with orthologs for HSERO_RS08285 only