Conservation of cofitness between HSERO_RS13630 and HSERO_RS07655 in Herbaspirillum seropedicae SmR1

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS13630 aldo-keto reductase 1.0 HSERO_RS07655 nodulation protein 0.29 10
Paraburkholderia sabiae LMG 24235 0.70 QEN71_RS22635 NADP(H)-dependent aldo-keto reductase 0.58 QEN71_RS23310 efflux RND transporter permease subunit low > 153
Paraburkholderia graminis OAS925 0.70 ABIE53_001982 aryl-alcohol dehydrogenase-like predicted oxidoreductase 0.46 ABIE53_001782 multidrug efflux pump low > 113
Burkholderia phytofirmans PsJN 0.69 BPHYT_RS08735 aldo-keto reductase 0.45 BPHYT_RS23545 nodulation protein low > 109
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_17050 aldo/keto reductase 0.48 AO356_25880 acriflavine resistance protein B low > 104
Pseudomonas fluorescens FW300-N2E2 0.63 Pf6N2E2_5334 Oxidoreductase, aldo/keto reductase family 0.48 Pf6N2E2_1271 Acriflavin resistance plasma membrane protein low > 103
Pseudomonas sp. RS175 0.62 PFR28_03609 Protein tas 0.48 PFR28_02193 Multidrug resistance protein MdtC low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.62 Psyr_2296 Aldo/keto reductase 0.51 Psyr_2484 Acriflavin resistance protein low > 86
Pseudomonas syringae pv. syringae B728a 0.62 Psyr_2296 Aldo/keto reductase 0.51 Psyr_2484 Acriflavin resistance protein low > 86
Pseudomonas stutzeri RCH2 0.62 Psest_3282 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 0.50 Psest_2140 Cation/multidrug efflux pump low > 67
Pseudomonas sp. S08-1 0.61 OH686_08405 Tas protein, an NADP(H)-dependent aldo-keto reductase 0.51 OH686_00930 Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtC (RND type) low > 80
Pseudomonas fluorescens FW300-N2E3 0.61 AO353_15230 aldo/keto reductase 0.51 AO353_22900 acriflavine resistance protein B low > 101
Pseudomonas fluorescens GW456-L13 0.61 PfGW456L13_1631 Oxidoreductase, aldo/keto reductase family 0.51 PfGW456L13_3265 Acriflavin resistance plasma membrane protein low > 87
Pseudomonas simiae WCS417 0.61 PS417_04140 aldo/keto reductase 0.50 PS417_12750 acriflavine resistance protein B low > 88
Pseudomonas fluorescens SBW25 0.61 PFLU_RS04180 NADP(H)-dependent aldo-keto reductase 0.50 PFLU_RS13435 MMPL family transporter low > 109
Pseudomonas fluorescens SBW25-INTG 0.61 PFLU_RS04180 NADP(H)-dependent aldo-keto reductase 0.50 PFLU_RS13435 MMPL family transporter low > 109
Pseudomonas putida KT2440 0.61 PP_1314 putative NAD(P)-linked reductase 0.50 PP_3583 multidrug efflux transport system - membrane subunit low > 96
Escherichia fergusonii Becca 0.59 EFB2_01049 Protein tas 0.56 EFB2_01779 Multidrug resistance protein MdtC low > 86
Escherichia coli BL21 0.59 ECD_02682 putative NADP(H)-dependent aldo-keto reductase 0.57 ECD_01981 multidrug efflux system, subunit C low > 61
Rahnella sp. WP5 0.59 EX31_RS13220 NADP(H)-dependent aldo-keto reductase 0.49 EX31_RS13375 MMPL family transporter 0.30 89
Escherichia coli HS(pFamp)R (ATCC 700891) 0.59 OHPLBJKB_00895 Protein tas 0.57 OHPLBJKB_01628 Multidrug resistance protein MdtC low > 73
Escherichia coli ECOR27 0.59 NOLOHH_11860 tas NADP(H)-dependent aldo-keto reductase 0.57 NOLOHH_15535 mdtC multidrug efflux RND transporter permease subunit MdtC low > 75
Escherichia coli BW25113 0.59 b2834 tas predicted oxidoreductase, NADP(H)-dependent aldo-keto reductase (NCBI) 0.57 b2076 mdtC multidrug efflux system, subunit C (NCBI) low > 76
Escherichia coli Nissle 1917 0.59 ECOLIN_RS15910 NADP(H)-dependent aldo-keto reductase 0.56 ECOLIN_RS12205 multidrug efflux RND transporter permease subunit MdtC
Serratia liquefaciens MT49 0.59 IAI46_20475 NADP(H)-dependent aldo-keto reductase 0.59 IAI46_18980 multidrug efflux RND transporter permease subunit MdtC low > 86
Escherichia coli ECRC62 0.59 BNILDI_10340 tas NADP(H)-dependent aldo-keto reductase 0.57 BNILDI_14450 mdtC multidrug efflux RND transporter permease subunit MdtC low > 75
Dickeya dadantii 3937 0.59 DDA3937_RS04925 NADP(H)-dependent aldo-keto reductase 0.55 DDA3937_RS15270 multidrug efflux RND transporter permease subunit MdtC low > 74
Pantoea sp. MT58 0.59 IAI47_03895 NADP(H)-dependent aldo-keto reductase 0.56 IAI47_06865 multidrug efflux RND transporter permease subunit MdtC low > 76
Escherichia coli ECRC101 0.59 MCAODC_10500 tas NADP(H)-dependent aldo-keto reductase 0.57 MCAODC_20750 mdtC multidrug efflux RND transporter permease subunit MdtC low > 87
Escherichia coli ECOR38 0.59 HEPCGN_19535 tas NADP(H)-dependent aldo-keto reductase 0.57 HEPCGN_02880 mdtC multidrug efflux RND transporter permease subunit MdtC low > 87
Escherichia coli ECRC99 0.59 KEDOAH_08155 tas NADP(H)-dependent aldo-keto reductase 0.57 KEDOAH_03960 mdtC multidrug efflux RND transporter permease subunit MdtC
Escherichia coli ECRC98 0.59 JDDGAC_23640 tas NADP(H)-dependent aldo-keto reductase 0.57 JDDGAC_28300 mdtC multidrug efflux RND transporter permease subunit MdtC low > 86
Escherichia coli ECRC102 0.59 NIAGMN_17745 tas NADP(H)-dependent aldo-keto reductase 0.57 NIAGMN_22135 mdtC multidrug efflux RND transporter permease subunit MdtC
Escherichia coli ECRC100 0.59 OKFHMN_19975 tas NADP(H)-dependent aldo-keto reductase 0.57 OKFHMN_24190 mdtC multidrug efflux RND transporter permease subunit MdtC low > 80
Dickeya dianthicola ME23 0.59 DZA65_RS05270 NADP(H)-dependent aldo-keto reductase 0.55 DZA65_RS16170 multidrug efflux RND transporter permease subunit MdtC low > 75
Dickeya dianthicola 67-19 0.59 HGI48_RS04935 NADP(H)-dependent aldo-keto reductase 0.55 HGI48_RS15350 multidrug efflux RND transporter permease subunit MdtC low > 71
Pectobacterium carotovorum WPP14 0.58 HER17_RS16605 NADP(H)-dependent aldo-keto reductase 0.57 HER17_RS06315 multidrug efflux RND transporter permease subunit MdtC low > 75
Enterobacter sp. TBS_079 0.58 MPMX20_03696 Protein tas 0.58 MPMX20_03062 Multidrug resistance protein MdtC low > 85
Klebsiella michiganensis M5al 0.58 BWI76_RS23305 NADP(H)-dependent aldo-keto reductase 0.56 BWI76_RS19260 multidrug transporter subunit MdtC low > 92
Enterobacter asburiae PDN3 0.58 EX28DRAFT_2908 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 0.58 EX28DRAFT_0482 Cation/multidrug efflux pump low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.57 GFF1317 Oxidoreductase, aldo/keto reductase family 0.56 GFF3853 Multidrug transporter MdtC low > 78
Erwinia tracheiphila SCR3 0.56 LU632_RS06080 NADP(H)-dependent aldo-keto reductase 0.51 LU632_RS08685 mdtC multidrug efflux RND transporter permease subunit MdtC low > 74
Azospirillum brasilense Sp245 0.55 AZOBR_RS02275 aldo-keto reductase 0.42 AZOBR_RS14670 multidrug transporter low > 97
Acinetobacter radioresistens SK82 0.55 MPMX26_01093 Protein tas 0.21 MPMX26_02516 Multidrug resistance protein MdtC low > 36
Bosea sp. OAE506 0.54 ABIE41_RS04820 aldo/keto reductase 0.40 ABIE41_RS20140 efflux RND transporter permease subunit low > 77
Agrobacterium fabrum C58 0.50 Atu1093 aldo/keto reductase 0.38 Atu3274 AcrB/AcrD/AcrF family protein low > 89
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS07460 aldo/keto reductase 0.64 RR42_RS03305 acriflavin resistance protein 0.29 93
Sinorhizobium meliloti 1021 0.47 SMc00570 oxidoreductase 0.21 SMc01457 transport transmembrane protein low > 103
Rhizobium sp. OAE497 0.46 ABIE40_RS06350 aldo/keto reductase 0.38 ABIE40_RS05760 efflux RND transporter permease subunit low > 107
Hydrogenophaga sp. GW460-11-11-14-LB1 0.42 GFF287 Oxidoreductase 0.44 GFF488 RND multidrug efflux transporter; Acriflavin resistance protein low > 90
Acidovorax sp. GW101-3H11 0.42 Ac3H11_2629 Oxidoreductase 0.57 Ac3H11_3620 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA low > 79
Phaeobacter inhibens DSM 17395 0.41 PGA1_c08380 protein Tas 0.11 PGA1_78p00510 multidrug transporter MdtB low > 62
Variovorax sp. SCN45 0.39 GFF3105 Tas protein, an NADP(H)-dependent aldo-keto reductase 0.55 GFF6658 Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtC (RND type) low > 127

Not shown: 23 genomes with orthologs for HSERO_RS13630 only; 8 genomes with orthologs for HSERO_RS07655 only