Conservation of cofitness between HSERO_RS19605 and HSERO_RS07610 in Herbaspirillum seropedicae SmR1

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS19605 membrane protein 1.0 HSERO_RS07610 fumarate hydratase 0.28 19
Pseudomonas fluorescens GW456-L13 0.65 PfGW456L13_2898 Integral membrane protein TerC 0.56 PfGW456L13_2160 Fumarate hydratase class II (EC 4.2.1.2) low > 87
Pseudomonas fluorescens FW300-N1B4 0.61 Pf1N1B4_5047 Integral membrane protein TerC 0.56 Pf1N1B4_367 Fumarate hydratase class II (EC 4.2.1.2) low > 87
Pantoea sp. MT58 0.58 IAI47_02930 TerC family protein 0.70 IAI47_10335 class II fumarate hydratase low > 76
Dechlorosoma suillum PS 0.57 Dsui_3091 integral membrane protein, TerC family 0.70 Dsui_0926 fumarate hydratase, class II low > 51
Erwinia tracheiphila SCR3 0.57 LU632_RS02315 TerC family protein 0.69 LU632_RS12335 fumC class II fumarate hydratase low > 74
Shewanella amazonensis SB2B 0.57 Sama_0510 hypothetical protein (RefSeq) 0.40 Sama_0822 fumarate hydratase (RefSeq) low > 62
Escherichia coli ECRC101 0.56 MCAODC_09055 alx TerC family membrane protein Alx 0.70 MCAODC_17760 fumC class II fumarate hydratase low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.56 GFF3190 Integral membrane protein TerC 0.71 GFF1806 Fumarate hydratase class II (EC 4.2.1.2) low > 78
Escherichia coli Nissle 1917 0.56 ECOLIN_RS17810 TerC family membrane protein Alx 0.70 ECOLIN_RS08995 class II fumarate hydratase
Escherichia fergusonii Becca 0.56 EFB2_00724 Putative membrane-bound redox modulator Alx 0.70 EFB2_02381 Fumarate hydratase class II low > 86
Escherichia coli ECOR38 0.56 HEPCGN_17395 alx TerC family membrane protein Alx 0.70 HEPCGN_06025 fumC class II fumarate hydratase low > 87
Escherichia coli ECOR27 0.56 NOLOHH_10340 alx TerC family membrane protein Alx 0.70 NOLOHH_18155 fumC class II fumarate hydratase low > 75
Escherichia coli BW25113 0.56 b3088 alx predicted inner membrane protein, part of terminus (NCBI) 0.70 b1611 fumC fumarate hydratase (NCBI) low > 76
Escherichia coli ECRC102 0.56 NIAGMN_16305 alx TerC family membrane protein Alx 0.70 NIAGMN_00425 fumC class II fumarate hydratase
Escherichia coli ECRC62 0.56 BNILDI_01175 alx TerC family membrane protein Alx 0.70 BNILDI_16945 fumC class II fumarate hydratase low > 75
Escherichia coli BL21 0.56 ECD_02957 putative membrane-bound redox modulator 0.70 ECD_01580 fumarate hydratase (fumarase C),aerobic Class II
Escherichia coli ECRC99 0.56 KEDOAH_09605 alx TerC family membrane protein Alx 0.70 KEDOAH_00455 fumC class II fumarate hydratase
Escherichia coli HS(pFamp)R (ATCC 700891) 0.56 OHPLBJKB_00614 Putative membrane-bound redox modulator Alx 0.71 OHPLBJKB_02115 Fumarate hydratase class II low > 73
Escherichia coli ECRC100 0.56 OKFHMN_18540 alx TerC family membrane protein Alx 0.70 OKFHMN_27650 fumC class II fumarate hydratase low > 80
Escherichia coli ECRC98 0.56 JDDGAC_22175 alx TerC family membrane protein Alx 0.70 JDDGAC_02240 fumC class II fumarate hydratase low > 86
Klebsiella michiganensis M5al 0.56 BWI76_RS24710 membrane protein 0.72 BWI76_RS16270 fumarate hydratase, class II low > 92
Pectobacterium carotovorum WPP14 0.55 HER17_RS18690 TerC family protein 0.71 HER17_RS10755 class II fumarate hydratase low > 75
Acidovorax sp. GW101-3H11 0.55 Ac3H11_884 Export protein 0.71 Ac3H11_943 Fumarate hydratase class II (EC 4.2.1.2) low > 79
Rahnella sp. WP5 0.55 EX31_RS08370 TerC family protein 0.71 EX31_RS06965 class II fumarate hydratase low > 89
Dickeya dadantii 3937 0.54 DDA3937_RS02845 TerC family protein 0.71 DDA3937_RS10655 class II fumarate hydratase low > 74
Enterobacter asburiae PDN3 0.54 EX28DRAFT_3157 integral membrane protein, TerC family 0.72 EX28DRAFT_1608 fumarase, class II (EC 4.2.1.2) low > 76
Enterobacter sp. TBS_079 0.54 MPMX20_03998 Putative membrane-bound redox modulator Alx 0.72 MPMX20_02022 Fumarate hydratase class II low > 85
Dickeya dianthicola 67-19 0.53 HGI48_RS02820 TerC family protein 0.71 HGI48_RS10655 class II fumarate hydratase low > 71
Dickeya dianthicola ME23 0.53 DZA65_RS02990 TerC family protein 0.71 DZA65_RS11125 class II fumarate hydratase low > 75
Serratia liquefaciens MT49 0.52 IAI46_22205 TerC family protein 0.71 IAI46_11655 class II fumarate hydratase low > 86
Xanthomonas campestris pv. campestris strain 8004 0.50 Xcc-8004.5396.1 export protein 0.42 Xcc-8004.3403.1 Fumarate hydratase class II (EC 4.2.1.2) low > 74
Hydrogenophaga sp. GW460-11-11-14-LB1 0.50 GFF1951 Integral membrane protein TerC 0.70 GFF4101 Fumarate hydratase class II (EC 4.2.1.2) low > 90
Acinetobacter radioresistens SK82 0.47 MPMX26_03061 Putative membrane-bound redox modulator Alx 0.61 MPMX26_01446 Fumarate hydratase class II low > 36
Azospirillum brasilense Sp245 0.45 AZOBR_RS19170 membrane protein 0.56 AZOBR_RS06120 fumarate hydratase low > 97
Desulfovibrio vulgaris Hildenborough JW710 0.43 DVU0567 TerC family protein (TIGR) 0.57 DVU0080 fumC fumarate hydratase, class II (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.43 DvMF_1240 Integral membrane protein TerC (RefSeq) 0.48 DvMF_2075 fumarate hydratase, class II (RefSeq) low > 51
Pontibacter actiniarum KMM 6156, DSM 19842 0.41 CA264_01565 tellurium resistance protein TerC 0.60 CA264_17145 class II fumarate hydratase
Caulobacter crescentus NA1000 0.41 CCNA_03796 tellurium resistance protein terC 0.56 CCNA_02194 fumarate hydratase
Caulobacter crescentus NA1000 Δfur 0.41 CCNA_03796 tellurium resistance protein terC 0.56 CCNA_02194 fumarate hydratase
Rhodospirillum rubrum S1H 0.40 Rru_A3680 Integral membrane protein TerC (NCBI) 0.56 Rru_A2129 Fumarate hydratase, class II (NCBI) low > 58
Pseudomonas putida KT2440 0.40 PP_3305 Membrane protein, TerC family 0.56 PP_1755 fumarate hydratase (class 2) low > 96
Pseudomonas sp. S08-1 0.39 OH686_00895 Integral membrane protein TerC 0.56 OH686_21015 fumarate hydratase, class II low > 80
Azospirillum sp. SherDot2 0.39 MPMX19_01049 Putative membrane-bound redox modulator Alx 0.59 MPMX19_01424 Fumarate hydratase class II low > 112
Agrobacterium fabrum C58 0.39 Atu1861 transporter 0.56 Atu1616 fumarate hydratase
Rhizobium sp. OAE497 0.39 ABIE40_RS29275 TerC family protein 0.56 ABIE40_RS10540 class II fumarate hydratase low > 107
Bosea sp. OAE506 0.38 ABIE41_RS18605 TerC family protein 0.53 ABIE41_RS12805 class II fumarate hydratase
Pedobacter sp. GW460-11-11-14-LB5 0.38 CA265_RS25115 hypothetical protein 0.56 CA265_RS23855 fumarate hydratase, class II
Pseudomonas sp. RS175 0.37 PFR28_02552 Putative membrane-bound redox modulator Alx 0.55 PFR28_00889 Fumarate hydratase class II low > 88
Mucilaginibacter yixingensis YX-36 DSM 26809 0.37 ABZR88_RS00905 TerC/Alx family metal homeostasis membrane protein 0.57 ABZR88_RS20230 class II fumarate hydratase
Echinicola vietnamensis KMM 6221, DSM 17526 0.36 Echvi_2999 integral membrane protein, TerC family 0.59 Echvi_1329 fumarate hydratase, class II
Vibrio cholerae E7946 ATCC 55056 0.34 CSW01_16960 DUF475 domain-containing protein 0.43 CSW01_07895 class II fumarate hydratase low > 62
Pseudomonas syringae pv. syringae B728a 0.24 Psyr_0811 Integral membrane protein TerC 0.57 Psyr_3661 Fumarate hydratase, class II low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.24 Psyr_0811 Integral membrane protein TerC 0.57 Psyr_3661 Fumarate hydratase, class II low > 86

Not shown: 2 genomes with orthologs for HSERO_RS19605 only; 44 genomes with orthologs for HSERO_RS07610 only