Conservation of cofitness between HGI48_RS14410 and HGI48_RS21265 in Dickeya dianthicola 67-19

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola 67-19 1.0 HGI48_RS14410 colicin V production protein 1.0 HGI48_RS21265 thiol:disulfide interchange protein DsbA 0.83 1
Dickeya dianthicola ME23 1.00 DZA65_RS15340 colicin V production protein 0.99 DZA65_RS22240 thiol:disulfide interchange protein DsbA 0.71 7
Dickeya dadantii 3937 1.00 DDA3937_RS14440 colicin V production protein 0.98 DDA3937_RS00100 thiol:disulfide interchange protein DsbA 0.50 51
Pectobacterium carotovorum WPP14 0.96 HER17_RS07015 colicin V production protein 0.85 HER17_RS21475 thiol:disulfide interchange protein DsbA 0.80 11
Rahnella sp. WP5 0.94 EX31_RS19575 colicin V production protein 0.79 EX31_RS15910 thiol:disulfide interchange protein DsbA low > 89
Serratia liquefaciens MT49 0.93 IAI46_17815 colicin V production protein 0.83 IAI46_24995 thiol:disulfide interchange protein DsbA low > 86
Pantoea sp. MT58 0.89 IAI47_06270 colicin V production protein 0.71 IAI47_00425 thiol:disulfide interchange protein DsbA — —
Enterobacter sp. TBS_079 0.87 MPMX20_03248 Colicin V production protein 0.76 MPMX20_04603 Thiol:disulfide interchange protein DsbA — —
Enterobacter asburiae PDN3 0.87 EX28DRAFT_0291 Uncharacterized membrane protein, required for colicin V production 0.76 EX28DRAFT_4341 Protein-disulfide isomerase low > 76
Klebsiella michiganensis M5al 0.86 BWI76_RS20355 colicin V production protein 0.73 BWI76_RS00345 protein disulfide oxidoreductase DsbA low > 92
Escherichia coli ECOR27 0.85 NOLOHH_14330 cvpA colicin V production protein 0.73 NOLOHH_06300 dsbA thiol:disulfide interchange protein DsbA low > 75
Escherichia fergusonii Becca 0.85 EFB2_01545 Colicin V production protein 0.73 EFB2_04757 Thiol:disulfide interchange protein DsbA low > 86
Escherichia coli Nissle 1917 0.85 ECOLIN_RS13410 colicin V production protein 0.73 ECOLIN_RS22250 thiol:disulfide interchange protein DsbA low > 55
Escherichia coli ECRC62 0.85 BNILDI_13250 cvpA colicin V production protein 0.73 BNILDI_05230 dsbA thiol:disulfide interchange protein DsbA low > 75
Escherichia coli ECOR38 0.85 HEPCGN_21905 cvpA colicin V production protein 0.73 HEPCGN_12805 dsbA thiol:disulfide interchange protein DsbA low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF1928 Colicin V production protein 0.76 GFF2213 Periplasmic thiol:disulfide interchange protein DsbA 0.35 75
Escherichia coli BL21 0.85 ECD_02238 colicin V production protein 0.73 ECD_03746 periplasmic protein disulfide isomerase I low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.85 OHPLBJKB_01392 Colicin V production protein 0.73 OHPLBJKB_04193 Thiol:disulfide interchange protein DsbA low > 73
Escherichia coli ECRC100 0.85 OKFHMN_22710 cvpA colicin V production protein 0.73 OKFHMN_14170 dsbA thiol:disulfide interchange protein DsbA low > 80
Escherichia coli ECRC98 0.85 JDDGAC_26670 cvpA colicin V production protein 0.72 JDDGAC_17795 dsbA thiol:disulfide interchange protein DsbA low > 86
Escherichia coli ECRC99 0.85 KEDOAH_05485 cvpA colicin V production protein 0.73 KEDOAH_13980 dsbA thiol:disulfide interchange protein DsbA — —
Escherichia coli ECRC101 0.85 MCAODC_13750 cvpA colicin V production protein 0.73 MCAODC_04670 dsbA thiol:disulfide interchange protein DsbA — —
Escherichia coli ECRC102 0.85 NIAGMN_20480 cvpA colicin V production protein 0.73 NIAGMN_11925 dsbA thiol:disulfide interchange protein DsbA — —
Escherichia coli BW25113 0.84 b2313 cvpA membrane protein required for colicin V production (NCBI) 0.73 b3860 dsbA periplasmic protein disulfide isomerase I (NCBI) low > 76
Shewanella loihica PV-4 0.71 Shew_2303 colicin V production protein (RefSeq) 0.34 Shew_0265 DSBA oxidoreductase (RefSeq) — —
Shewanella sp. ANA-3 0.69 Shewana3_1482 colicin V production protein (RefSeq) 0.31 Shewana3_3838 DSBA oxidoreductase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.69 Sama_2147 colicin V production protein (RefSeq) 0.32 Sama_3321 thiol:disulfide interchange protein DsbA (RefSeq) low > 62
Shewanella oneidensis MR-1 0.69 SO3065 colicin V production protein (NCBI ptt file) 0.32 SO0333 dsbA thiol:disulfide interchange protein DsbA (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.66 CSW01_05110 bacteriocin production protein 0.36 CSW01_00170 thiol:disulfide interchange protein DsbA low > 62
Alteromonas macleodii MIT1002 0.64 MIT1002_02525 Pur regulon 18 kDa protein 0.24 MIT1002_00714 Thiol:disulfide interchange protein DsbA precursor — —
Kangiella aquimarina DSM 16071 0.47 B158DRAFT_1487 Uncharacterized membrane protein, required for colicin V production 0.20 B158DRAFT_0392 Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis low > 40
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS20520 colicin V production protein CvpA 0.20 PFLU_RS00415 thiol:disulfide interchange protein DsbA/DsbL low > 109
Pseudomonas simiae WCS417 0.35 PS417_18540 colicin V production CvpA 0.20 PS417_00425 thiol:disulfide interchange protein — —
Pseudomonas fluorescens SBW25 0.35 PFLU_RS20520 colicin V production protein CvpA 0.20 PFLU_RS00415 thiol:disulfide interchange protein DsbA/DsbL low > 109
Pseudomonas stutzeri RCH2 0.32 Psest_2580 Uncharacterized membrane protein, required for colicin V production 0.18 Psest_0186 Protein-disulfide isomerase low > 67
Cupriavidus basilensis FW507-4G11 0.27 RR42_RS14330 bacteriocin production protein 0.14 RR42_RS00835 DSBA oxidoreductase — —
Paraburkholderia sabiae LMG 24235 0.23 QEN71_RS17675 CvpA family protein 0.17 QEN71_RS01165 thiol:disulfide interchange protein DsbA/DsbL low > 153
Burkholderia phytofirmans PsJN 0.22 BPHYT_RS33845 bacteriocin production protein 0.14 BPHYT_RS02280 DSBA oxidoreductase — —
Paraburkholderia bryophila 376MFSha3.1 0.22 H281DRAFT_06061 membrane protein required for colicin V production 0.14 H281DRAFT_02081 thiol:disulfide interchange protein DsbA — —
Castellaniella sp019104865 MT123 0.21 ABCV34_RS04135 CvpA family protein 0.13 ABCV34_RS12390 thiol:disulfide interchange protein DsbA/DsbL low > 48
Acidovorax sp. GW101-3H11 0.19 Ac3H11_2609 Colicin V production protein 0.14 Ac3H11_724 Periplasmic thiol:disulfide interchange protein DsbA — —
Ralstonia solanacearum IBSBF1503 0.19 RALBFv3_RS02555 colicin V biosynthesis protein 0.14 RALBFv3_RS10560 thiol:disulfide interchange protein DsbA/DsbL low > 76
Ralstonia solanacearum UW163 0.19 UW163_RS11170 colicin V biosynthesis protein 0.14 UW163_RS03020 thiol:disulfide interchange protein DsbA/DsbL — —
Ralstonia solanacearum PSI07 0.18 RPSI07_RS14760 colicin V synthesis protein 0.14 RPSI07_RS22755 thiol:disulfide interchange protein DsbA/DsbL low > 81
Dechlorosoma suillum PS 0.18 Dsui_3187 putative membrane protein, required for colicin V production 0.13 Dsui_0675 putative dithiol-disulfide isomerase involved in polyketide biosynthesis low > 51

Not shown: 12 genomes with orthologs for HGI48_RS14410 only; 9 genomes with orthologs for HGI48_RS21265 only