Conservation of cofitness between HER17_RS12030 and HER17_RS16580 in Pectobacterium carotovorum WPP14

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12030 aspartate/tyrosine/aromatic aminotransferase 1.0 HER17_RS16580 phosphoenolpyruvate--protein phosphotransferase 0.88 17
Serratia liquefaciens MT49 0.88 IAI46_08750 aspartate/tyrosine/aromatic aminotransferase 0.79 IAI46_20450 phosphoenolpyruvate--protein phosphotransferase low > 86
Escherichia coli ECRC62 0.87 BNILDI_20195 aspC aspartate transaminase 0.75 BNILDI_10370 ptsP phosphoenolpyruvate--protein phosphotransferase low > 75
Escherichia coli ECOR27 0.87 NOLOHH_21940 aspC aspartate transaminase 0.75 NOLOHH_11890 ptsP phosphoenolpyruvate--protein phosphotransferase low > 75
Escherichia coli ECOR38 0.87 HEPCGN_23140 aspC aspartate transaminase 0.75 HEPCGN_19260 ptsP phosphoenolpyruvate--protein phosphotransferase low > 87
Escherichia coli BW25113 0.87 b0928 aspC aspartate aminotransferase, PLP-dependent (NCBI) 0.75 b2829 ptsP fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF domain containing protein (NCBI) low > 76
Escherichia coli BL21 0.87 ECD_00932 aspartate aminotransferase, PLP-dependent 0.75 ECD_02677 PEP-protein phosphotransferase enzyme I; GAF domain containing protein — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.87 OHPLBJKB_02738 Aspartate aminotransferase 0.75 OHPLBJKB_00901 Phosphoenolpyruvate-dependent phosphotransferase system low > 73
Escherichia coli Nissle 1917 0.86 ECOLIN_RS04910 aspartate transaminase 0.75 ECOLIN_RS15875 phosphoenolpyruvate--protein phosphotransferase — —
Rahnella sp. WP5 0.86 EX31_RS18145 aspartate/tyrosine/aromatic aminotransferase 0.75 EX31_RS13200 phosphoenolpyruvate--protein phosphotransferase low > 89
Escherichia fergusonii Becca 0.86 EFB2_03136 Aspartate aminotransferase 0.75 EFB2_01055 Phosphoenolpyruvate-dependent phosphotransferase system low > 86
Escherichia coli ECRC98 0.86 JDDGAC_08995 aspC aspartate transaminase 0.75 JDDGAC_23670 ptsP phosphoenolpyruvate--protein phosphotransferase low > 86
Escherichia coli ECRC102 0.86 NIAGMN_03105 aspC aspartate transaminase 0.75 NIAGMN_17775 ptsP phosphoenolpyruvate--protein phosphotransferase — —
Escherichia coli ECRC100 0.86 OKFHMN_05385 aspC aspartate transaminase 0.75 OKFHMN_20005 ptsP phosphoenolpyruvate--protein phosphotransferase low > 80
Escherichia coli ECRC99 0.86 KEDOAH_22350 aspC aspartate transaminase 0.75 KEDOAH_08125 ptsP phosphoenolpyruvate--protein phosphotransferase — —
Escherichia coli ECRC101 0.86 MCAODC_24775 aspC aspartate transaminase 0.75 MCAODC_10530 ptsP phosphoenolpyruvate--protein phosphotransferase low > 87
Klebsiella michiganensis M5al 0.86 BWI76_RS09870 aromatic amino acid aminotransferase 0.72 BWI76_RS23270 phosphoenolpyruvate--protein phosphotransferase PtsP low > 92
Dickeya dianthicola 67-19 0.86 HGI48_RS12990 aspartate/tyrosine/aromatic aminotransferase 0.85 HGI48_RS04960 phosphoenolpyruvate--protein phosphotransferase low > 71
Enterobacter sp. TBS_079 0.86 MPMX20_01586 Aspartate aminotransferase 0.75 MPMX20_03692 Phosphoenolpyruvate-dependent phosphotransferase system low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF3685 Aspartate aminotransferase (EC 2.6.1.1) 0.76 GFF1311 FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated low > 78
Dickeya dadantii 3937 0.85 DDA3937_RS12915 aspartate/tyrosine/aromatic aminotransferase 0.86 DDA3937_RS04950 phosphoenolpyruvate--protein phosphotransferase low > 74
Enterobacter asburiae PDN3 0.85 EX28DRAFT_2008 Aspartate/tyrosine/aromatic aminotransferase 0.75 EX28DRAFT_2904 phosphoenolpyruvate-protein phosphotransferase low > 76
Dickeya dianthicola ME23 0.85 DZA65_RS13450 aspartate/tyrosine/aromatic aminotransferase 0.85 DZA65_RS05300 phosphoenolpyruvate--protein phosphotransferase low > 75
Pantoea sp. MT58 0.84 IAI47_12765 aspartate/tyrosine/aromatic aminotransferase 0.73 IAI47_03920 phosphoenolpyruvate--protein phosphotransferase low > 76
Erwinia tracheiphila SCR3 0.83 LU632_RS09905 aspartate/tyrosine/aromatic aminotransferase 0.72 LU632_RS06110 ptsP phosphoenolpyruvate--protein phosphotransferase low > 74
Shewanella loihica PV-4 0.66 Shew_1999 aromatic amino acid aminotransferase (RefSeq) 0.39 Shew_1039 phosphoenolpyruvate-protein phosphotransferase PtsP (RefSeq) low > 60
Shewanella sp. ANA-3 0.64 Shewana3_2121 aromatic amino acid aminotransferase (RefSeq) 0.41 Shewana3_3042 phosphoenolpyruvate-protein phosphotransferase PtsP (RefSeq) low > 73
Shewanella amazonensis SB2B 0.64 Sama_1805 aromatic amino acid aminotransferase (RefSeq) 0.41 Sama_0864 phosphoenolpyruvate-protein phosphotransferase PtsP (RefSeq) low > 62
Shewanella oneidensis MR-1 0.64 SO2350 aspC-1 aspartate aminotransferase (NCBI ptt file) 0.41 SO1332 ptsP phosphoenolpyruvate-protein phosphotransferase PtsP (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_06530 aromatic amino acid aminotransferase 0.49 CSW01_03525 phosphoenolpyruvate-protein phosphotransferase PtsP low > 62
Pseudomonas fluorescens FW300-N2E2 0.47 Pf6N2E2_2632 tyrosine aminotransferase (EC 2.6.1.57) (from data) 0.38 Pf6N2E2_3942 FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated low > 103
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_03985 L-phenylalanine transaminase (EC 2.6.1.57) (from data) 0.38 AO356_10350 phosphoenolpyruvate-protein phosphotransferase low > 104
Pseudomonas fluorescens GW456-L13 0.46 PfGW456L13_4396 tyrosine aminotransferase (EC 2.6.1.57) (from data) 0.38 PfGW456L13_953 FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated low > 87
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS21880 aspartate/tyrosine/aromatic aminotransferase 0.38 PFLU_RS28645 phosphoenolpyruvate--protein phosphotransferase low > 109
Pseudomonas simiae WCS417 0.46 PS417_19910 aromatic amino acid aminotransferase 0.38 PS417_26985 phosphoenolpyruvate-protein phosphotransferase low > 88
Pseudomonas fluorescens SBW25 0.46 PFLU_RS21880 aspartate/tyrosine/aromatic aminotransferase 0.38 PFLU_RS28645 phosphoenolpyruvate--protein phosphotransferase low > 109
Pseudomonas sp. RS175 0.46 PFR28_00800 Aspartate aminotransferase 0.38 PFR28_04830 Phosphoenolpyruvate-dependent phosphotransferase system low > 88
Marinobacter adhaerens HP15 0.45 HP15_858 phenylalanine aminotransferase (EC 2.6.1.57) (from data) 0.39 HP15_463 fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain protein low > 73
Pseudomonas sp. S08-1 0.45 OH686_21225 Aspartate aminotransferase or Aromatic-amino-acid aminotransferase 0.39 OH686_11430 Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated low > 80
Alteromonas macleodii MIT1002 0.45 MIT1002_02269 Aspartate aminotransferase 0.41 MIT1002_00648 Phosphoenolpyruvate-protein phosphotransferase — —
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_1973 Aspartate transaminase 0.38 Psyr_4842 Phosphoenolpyruvate-protein phosphotransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_1973 Aspartate transaminase 0.38 Psyr_4842 Phosphoenolpyruvate-protein phosphotransferase low > 86
Sphingomonas koreensis DSMZ 15582 0.41 Ga0059261_1688 Aspartate/tyrosine/aromatic aminotransferase 0.23 Ga0059261_2514 phosphoenolpyruvate-protein phosphotransferase low > 68
Sinorhizobium meliloti 1021 0.40 SMc00387 aromatic amino acid aminotransferase 0.25 SMc02437 phosphoenolpyruvate phosphotransferase PTSP (enzyme I-Ntr) protein — —
Phaeobacter inhibens DSM 17395 0.40 PGA1_c29420 aromatic-amino-acid transaminase [EC:2.6.1.57] (from data) 0.21 PGA1_c23500 phosphoenolpyruvate-protein phosphotransferase PtsP — —
Azospirillum sp. SherDot2 0.39 MPMX19_05266 Aspartate aminotransferase 0.23 MPMX19_02675 Phosphoenolpyruvate-dependent phosphotransferase system low > 112
Dinoroseobacter shibae DFL-12 0.35 Dshi_0145 Aspartate transaminase (RefSeq) 0.21 Dshi_2062 PTSINtr with GAF domain, PtsP (RefSeq) low > 64

Not shown: 5 genomes with orthologs for HER17_RS12030 only; 15 genomes with orthologs for HER17_RS16580 only