Conservation of cofitness between HER17_RS15875 and HER17_RS14950 in Pectobacterium carotovorum WPP14

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS15875 cytochrome o ubiquinol oxidase subunit II 1.0 HER17_RS14950 succinate dehydrogenase cytochrome b556 subunit 0.74 16
Dickeya dadantii 3937 0.82 DDA3937_RS05615 cytochrome o ubiquinol oxidase subunit II 0.83 DDA3937_RS06440 succinate dehydrogenase cytochrome b556 subunit low > 74
Dickeya dianthicola 67-19 0.82 HGI48_RS05660 cytochrome o ubiquinol oxidase subunit II 0.83 HGI48_RS06480 succinate dehydrogenase cytochrome b556 subunit low > 71
Dickeya dianthicola ME23 0.81 DZA65_RS05985 cytochrome o ubiquinol oxidase subunit II 0.80 DZA65_RS06825 succinate dehydrogenase cytochrome b556 subunit low > 75
Escherichia coli ECRC62 0.68 BNILDI_22710 cyoA cytochrome o ubiquinol oxidase subunit II 0.83 BNILDI_21330 sdhC succinate dehydrogenase cytochrome b556 subunit low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.68 OHPLBJKB_03241 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.83 OHPLBJKB_02995 Succinate dehydrogenase cytochrome b556 subunit low > 73
Escherichia coli ECOR27 0.68 NOLOHH_01295 cyoA cytochrome o ubiquinol oxidase subunit II 0.83 NOLOHH_23335 sdhC succinate dehydrogenase cytochrome b556 subunit 0.79 6
Escherichia coli BL21 0.68 ECD_00383 cytochrome o ubiquinol oxidase subunit II 0.83 ECD_00681 succinate dehydrogenase, membrane subunit, binds cytochrome b556 low > 61
Escherichia coli ECOR38 0.68 HEPCGN_06975 cyoA cytochrome o ubiquinol oxidase subunit II 0.83 HEPCGN_01285 sdhC succinate dehydrogenase cytochrome b556 subunit low > 87
Escherichia coli Nissle 1917 0.68 ECOLIN_RS02595 cytochrome o ubiquinol oxidase subunit II 0.83 ECOLIN_RS03845 succinate dehydrogenase cytochrome b556 subunit
Escherichia coli BW25113 0.68 b0432 cyoA cytochrome o ubiquinol oxidase subunit II (NCBI) 0.83 b0721 sdhC succinate dehydrogenase cytochrome b556 large membrane subunit (NCBI) 0.56 25
Escherichia fergusonii Becca 0.67 EFB2_03625 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.83 EFB2_03384 Succinate dehydrogenase cytochrome b556 subunit low > 86
Escherichia coli ECRC101 0.67 MCAODC_27585 cyoA cytochrome o ubiquinol oxidase subunit II 0.83 MCAODC_26170 sdhC succinate dehydrogenase cytochrome b556 subunit 0.69 16
Escherichia coli ECRC102 0.67 NIAGMN_06415 cyoA cytochrome o ubiquinol oxidase subunit II 0.83 NIAGMN_05000 sdhC succinate dehydrogenase cytochrome b556 subunit
Klebsiella michiganensis M5al 0.67 BWI76_RS06495 cytochrome ubiquinol oxidase subunit II 0.83 BWI76_RS08395 succinate dehydrogenase cytochrome b556 large subunit 0.26 78
Escherichia coli ECRC99 0.67 KEDOAH_19605 cyoA cytochrome o ubiquinol oxidase subunit II 0.83 KEDOAH_21015 sdhC succinate dehydrogenase cytochrome b556 subunit
Escherichia coli ECRC98 0.67 JDDGAC_12015 cyoA cytochrome o ubiquinol oxidase subunit II 0.83 JDDGAC_10605 sdhC succinate dehydrogenase cytochrome b556 subunit low > 86
Escherichia coli ECRC100 0.67 OKFHMN_08360 cyoA cytochrome o ubiquinol oxidase subunit II 0.83 OKFHMN_06950 sdhC succinate dehydrogenase cytochrome b556 subunit
Enterobacter asburiae PDN3 0.66 EX28DRAFT_2539 cytochrome o ubiquinol oxidase subunit II 0.85 EX28DRAFT_2270 succinate dehydrogenase subunit C (EC 1.3.5.1) 0.70 36
Serratia liquefaciens MT49 0.66 IAI46_04985 cytochrome o ubiquinol oxidase subunit II 0.77 IAI46_06255 succinate dehydrogenase cytochrome b556 subunit 0.68 10
Pantoea sp. MT58 0.66 IAI47_14680 cytochrome o ubiquinol oxidase subunit II 0.71 IAI47_13765 succinate dehydrogenase cytochrome b556 subunit 0.73 7
Erwinia tracheiphila SCR3 0.65 LU632_RS18375 cyoA cytochrome o ubiquinol oxidase subunit II 0.71 LU632_RS16115 sdhC succinate dehydrogenase cytochrome b556 subunit
Rahnella sp. WP5 0.65 EX31_RS22220 cytochrome o ubiquinol oxidase subunit II 0.75 EX31_RS23420 succinate dehydrogenase cytochrome b556 subunit low > 89
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_1141 cytochrome bo3 quinol oxidase subunit 2 0.50 Psyr_2005 succinate dehydrogenase subunit C
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_1141 cytochrome bo3 quinol oxidase subunit 2 0.50 Psyr_2005 succinate dehydrogenase subunit C
Pseudomonas putida KT2440 0.56 PP_0812 cytochrome bo terminal oxidase subunit II 0.50 PP_4193 succinate dehydrogenase membrane b-556 subunit
Ralstonia solanacearum IBSBF1503 0.54 RALBFv3_RS06660 ubiquinol oxidase subunit II 0.23 RALBFv3_RS02650 succinate dehydrogenase, cytochrome b556 subunit
Ralstonia solanacearum UW163 0.54 UW163_RS06965 ubiquinol oxidase subunit II 0.23 UW163_RS11075 succinate dehydrogenase, cytochrome b556 subunit
Ralstonia solanacearum PSI07 0.54 RPSI07_RS10565 ubiquinol oxidase subunit II 0.24 RPSI07_RS14665 succinate dehydrogenase, cytochrome b556 subunit
Ralstonia sp. UNC404CL21Col 0.54 ABZR87_RS02335 ubiquinol oxidase subunit II 0.25 ABZR87_RS14570 succinate dehydrogenase, cytochrome b556 subunit
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS25220 ubiquinol oxidase subunit II 0.49 PFLU_RS08935 succinate dehydrogenase, cytochrome b556 subunit
Pseudomonas simiae WCS417 0.53 PS417_23390 ubiquinol oxidase subunit II 0.50 PS417_08875 succinate dehydrogenase
Burkholderia phytofirmans PsJN 0.53 BPHYT_RS24915 ubiquinol oxidase subunit II 0.23 BPHYT_RS33945 succinate dehydrogenase
Pseudomonas fluorescens SBW25 0.53 PFLU_RS25220 ubiquinol oxidase subunit II 0.49 PFLU_RS08935 succinate dehydrogenase, cytochrome b556 subunit
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_16960 ubiquinol oxidase subunit II 0.51 AO356_19675 succinate dehydrogenase
Pseudomonas sp. RS175 0.53 PFR28_00242 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.51 PFR28_03100 Succinate dehydrogenase cytochrome b556 subunit
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS15340 ubiquinol oxidase subunit II 0.20 QEN71_RS17575 succinate dehydrogenase, cytochrome b556 subunit low > 153
Alteromonas macleodii MIT1002 0.52 MIT1002_03929 Ubiquinol oxidase subunit 2 precursor 0.47 MIT1002_01944 Succinate dehydrogenase cytochrome b556 subunit
Shewanella loihica PV-4 0.51 Shew_0366 ubiquinol oxidase, subunit II (RefSeq) 0.56 Shew_1651 succinate dehydrogenase, cytochrome b subunit (RefSeq)
Ralstonia solanacearum GMI1000 0.51 RS_RS14610 ubiquinol oxidase subunit II 0.24 RS_RS10030 succinate dehydrogenase, cytochrome b556 subunit
Paraburkholderia graminis OAS925 0.49 ABIE53_005340 cytochrome o ubiquinol oxidase subunit 2 0.28 ABIE53_004765 succinate dehydrogenase / fumarate reductase cytochrome b subunit
Shewanella sp. ANA-3 0.49 Shewana3_4031 ubiquinol oxidase, subunit II (RefSeq) 0.62 Shewana3_1706 succinate dehydrogenase subunit C (RefSeq)
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS32600 cytochrome O ubiquinol oxidase subunit II 0.20 RR42_RS14455 succinate dehydrogenase
Sinorhizobium meliloti 1021 0.46 SM_b21487 cytochrome o ubiquinol oxidase subunit II 0.24 SMc02463 succinate dehydrogenase cytochrome B-556 subunit transmembrane protein
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS07625 ubiquinol oxidase subunit II 0.21 ABZR86_RS06345 succinate dehydrogenase, cytochrome b556 subunit
Variovorax sp. SCN45 0.45 GFF5678 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.24 GFF3899 Succinate dehydrogenase cytochrome b-556 subunit
Acinetobacter radioresistens SK82 0.42 MPMX26_01162 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.32 MPMX26_00747 Succinate dehydrogenase cytochrome b556 subunit
Acidovorax sp. GW101-3H11 0.42 Ac3H11_3141 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.24 Ac3H11_3156 Succinate dehydrogenase cytochrome b-556 subunit
Herbaspirillum seropedicae SmR1 0.40 HSERO_RS12320 cytochrome O ubiquinol oxidase 0.23 HSERO_RS14915 succinate dehydrogenase

Not shown: 9 genomes with orthologs for HER17_RS15875 only; 21 genomes with orthologs for HER17_RS14950 only