Conservation of cofitness between HER17_RS12930 and HER17_RS13870 in Pectobacterium carotovorum WPP14

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12930 microcin C ABC transporter permease 1.0 HER17_RS13870 NAD(P)-dependent oxidoreductase 0.56 7
Dickeya dadantii 3937 0.87 DDA3937_RS09180 ABC transporter permease subunit 0.77 DDA3937_RS21345 NAD(P)-dependent oxidoreductase low > 74
Serratia liquefaciens MT49 0.79 IAI46_17325 ABC transporter permease subunit 0.40 IAI46_11295 NAD(P)-dependent oxidoreductase low > 86
Vibrio cholerae E7946 ATCC 55056 0.72 CSW01_17175 ABC transporter permease 0.37 CSW01_19360 NAD(P)-dependent oxidoreductase low > 62
Pantoea sp. MT58 0.69 IAI47_06605 ABC transporter permease subunit 0.16 IAI47_20440 SDR family oxidoreductase low > 76
Pseudomonas sp. S08-1 0.65 OH686_03610 ABC transporter, permease protein 2 0.47 OH686_07445 Rrf2-linked NADH-flavin reductase low > 80
Azospirillum sp. SherDot2 0.64 MPMX19_02170 Inner membrane ABC transporter permease protein YejE 0.62 MPMX19_01621 hypothetical protein low > 112
Pseudomonas sp. RS175 0.63 PFR28_01547 Inner membrane ABC transporter permease protein YejE 0.56 PFR28_03378 hypothetical protein low > 88
Rhodospirillum rubrum S1H 0.63 Rru_A3168 Binding-protein-dependent transport systems inner membrane component (NCBI) 0.65 Rru_A2522 conserved hypothetical protein PA0741 (NCBI) low > 58
Pseudomonas fluorescens SBW25 0.63 PFLU_RS12885 ABC transporter permease 0.59 PFLU_RS07415 NAD(P)-dependent oxidoreductase low > 109
Pseudomonas fluorescens SBW25-INTG 0.63 PFLU_RS12885 ABC transporter permease 0.59 PFLU_RS07415 NAD(P)-dependent oxidoreductase low > 109
Pseudomonas putida KT2440 0.62 PP_4149 putative inner membrane ABC transporter permease protein 0.54 PP_1392 putative NAD-binding protein low > 96
Pseudomonas fluorescens FW300-N2E2 0.62 Pf6N2E2_582 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.55 Pf6N2E2_5563 Rrf2-linked NADH-flavin reductase low > 103
Pseudomonas fluorescens GW456-L13 0.62 PfGW456L13_3345 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.51 PfGW456L13_1792 Rrf2-linked NADH-flavin reductase low > 87
Pseudomonas fluorescens FW300-N2C3 0.62 AO356_24455 ABC transporter permease 0.57 AO356_18195 3-beta hydroxysteroid dehydrogenase low > 104
Pseudomonas fluorescens FW300-N2E3 0.62 AO353_23465 ABC transporter permease 0.54 AO353_03875 3-beta hydroxysteroid dehydrogenase low > 101
Pseudomonas fluorescens FW300-N1B4 0.62 Pf1N1B4_4591 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.55 Pf1N1B4_698 Rrf2-linked NADH-flavin reductase — —
Pseudomonas simiae WCS417 0.61 PS417_12195 ABC transporter permease 0.58 PS417_07305 3-beta hydroxysteroid dehydrogenase low > 88
Agrobacterium fabrum C58 0.58 Atu0189 ABC transporter, membrane spanning protein (peptide) 0.79 Atu1999 hypothetical protein low > 89
Sinorhizobium meliloti 1021 0.57 SMc02830 ABC transporter permease 0.33 SMa2099 NAD-dependent epimerase/dehydratase — —
Phaeobacter inhibens DSM 17395 0.53 PGA1_c30160 ABC transporter permease protein 0.24 PGA1_c02820 putative transcriptional regulator, AraC family low > 62
Variovorax sp. SCN45 0.52 GFF227 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) 0.58 GFF478 Rrf2-linked NADH-flavin reductase low > 127
Paraburkholderia bryophila 376MFSha3.1 0.51 H281DRAFT_00562 microcin C transport system permease protein 0.43 H281DRAFT_05078 hypothetical protein low > 103
Acidovorax sp. GW101-3H11 0.50 Ac3H11_2909 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.40 Ac3H11_3518 Rrf2-linked NADH-flavin reductase low > 79
Paraburkholderia graminis OAS925 0.50 ABIE53_002548 microcin C transport system permease protein 0.42 ABIE53_001802 putative NADH-flavin reductase low > 113
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS07165 peptide ABC transporter permease 0.41 BPHYT_RS07940 3-beta hydroxysteroid dehydrogenase low > 109
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF4337 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.44 GFF1989 Rrf2-linked NADH-flavin reductase low > 90
Ralstonia solanacearum PSI07 0.49 RPSI07_RS18330 ABC transporter permease 0.55 RPSI07_RS02015 NAD(P)-dependent oxidoreductase low > 81
Ralstonia solanacearum GMI1000 0.49 RS_RS05860 ABC transporter permease 0.51 RS_RS19685 NAD(P)-dependent oxidoreductase low > 80
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS13375 peptide ABC transporter permease 0.56 RR42_RS13080 3-beta hydroxysteroid dehydrogenase low > 128
Ralstonia solanacearum UW163 0.48 UW163_RS12515 ABC transporter permease 0.54 UW163_RS22270 NAD(P)-dependent oxidoreductase — —
Ralstonia solanacearum IBSBF1503 0.48 RALBFv3_RS15045 ABC transporter permease 0.54 RALBFv3_RS21130 NAD(P)-dependent oxidoreductase low > 76
Ralstonia sp. UNC404CL21Col 0.48 ABZR87_RS10690 ABC transporter permease 0.52 ABZR87_RS21600 NAD(P)-dependent oxidoreductase low > 80
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS17135 peptide ABC transporter permease 0.55 HSERO_RS23205 3-beta hydroxysteroid dehydrogenase low > 78
Variovorax sp. OAS795 0.47 ABID97_RS16510 ABC transporter permease 0.58 ABID97_RS17540 NAD(P)-dependent oxidoreductase low > 91
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS06180 ABC transporter permease 0.43 QEN71_RS23225 NAD(P)-dependent oxidoreductase low > 153

Not shown: 32 genomes with orthologs for HER17_RS12930 only; 13 genomes with orthologs for HER17_RS13870 only