Conservation of cofitness between HER17_RS12855 and HER17_RS13460 in Pectobacterium carotovorum WPP14

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12855 PTS fructose transporter subunit IIBC 1.0 HER17_RS13460 biotin synthase BioB 0.70 15
Dickeya dianthicola 67-19 0.83 HGI48_RS09270 PTS fructose transporter subunit IIBC 0.92 HGI48_RS08675 biotin synthase BioB low > 71
Dickeya dadantii 3937 0.83 DDA3937_RS09240 PTS fructose transporter subunit IIBC 0.92 DDA3937_RS08510 biotin synthase BioB low > 74
Dickeya dianthicola ME23 0.83 DZA65_RS09575 PTS fructose transporter subunit IIBC 0.92 DZA65_RS08965 biotin synthase BioB low > 75
Serratia liquefaciens MT49 0.77 IAI46_17230 PTS fructose transporter subunit IIBC 0.89 IAI46_06525 biotin synthase BioB low > 86
Escherichia coli BL21 0.76 ECD_02096 fused fructose-specific PTS enzymes: IIBcomponent/IIC components 0.86 ECD_00742 biotin synthase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.76 OHPLBJKB_01543 'PTS system fructose-specific EIIB'BC component' transl_table=11 0.86 OHPLBJKB_02938 Biotin synthase low > 73
Escherichia coli ECOR27 0.75 NOLOHH_15020 fruA PTS fructose transporter subunit IIBC 0.86 NOLOHH_22770 bioB biotin synthase BioB low > 75
Escherichia coli ECRC62 0.75 BNILDI_13940 fruA PTS fructose transporter subunit IIBC 0.86 BNILDI_21040 bioB biotin synthase BioB low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF3773 PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) 0.84 GFF671 Biotin synthase (EC 2.8.1.6) low > 78
Pantoea sp. MT58 0.75 IAI47_06660 PTS fructose transporter subunit IIBC 0.85 IAI47_13530 biotin synthase BioB low > 76
Escherichia coli ECOR38 0.75 HEPCGN_22710 fruA PTS fructose transporter subunit IIBC 0.86 HEPCGN_01640 bioB biotin synthase BioB low > 87
Escherichia coli Nissle 1917 0.75 ECOLIN_RS12675 PTS fructose transporter subunit IIBC 0.86 ECOLIN_RS04130 biotin synthase BioB
Enterobacter asburiae PDN3 0.75 EX28DRAFT_0396 PTS system, fructose-specific, IIB component/PTS system, fructose subfamily, IIC component 0.84 EX28DRAFT_2216 biotin synthase (EC 2.8.1.6) low > 76
Escherichia coli ECRC102 0.75 NIAGMN_21210 fruA PTS fructose transporter subunit IIBC 0.86 NIAGMN_04445 bioB biotin synthase BioB
Escherichia coli ECRC100 0.75 OKFHMN_23445 fruA PTS fructose transporter subunit IIBC 0.86 OKFHMN_06400 bioB biotin synthase BioB low > 80
Escherichia coli ECRC98 0.75 JDDGAC_27405 fruA PTS fructose transporter subunit IIBC 0.86 JDDGAC_10035 bioB biotin synthase BioB low > 86
Escherichia coli ECRC99 0.75 KEDOAH_04740 fruA PTS fructose transporter subunit IIBC 0.86 KEDOAH_21510 bioB biotin synthase BioB
Enterobacter sp. TBS_079 0.75 MPMX20_03131 PTS system fructose-specific EIIB'BC component 0.84 MPMX20_01403 Biotin synthase 0.14 75
Escherichia fergusonii Becca 0.75 EFB2_01690 PTS system fructose-specific EIIB'BC component 0.86 EFB2_03330 Biotin synthase low > 86
Escherichia coli ECRC101 0.75 MCAODC_14495 fruA PTS fructose transporter subunit IIBC 0.86 MCAODC_25615 bioB biotin synthase BioB low > 87
Escherichia coli BW25113 0.75 b2167 fruA fused fructose-specific PTS enzymes: IIBcomponent/IIC components (NCBI) 0.86 b0775 bioB biotin synthase (NCBI) low > 76
Klebsiella michiganensis M5al 0.74 BWI76_RS19725 PTS fructose transporter subunit EIIBC 0.85 BWI76_RS08760 biotin synthase low > 92
Rahnella sp. WP5 0.74 EX31_RS19065 PTS fructose transporter subunit IIBC 0.90 EX31_RS23695 biotin synthase BioB low > 89
Erwinia tracheiphila SCR3 0.73 LU632_RS17315 fruA PTS fructose transporter subunit IIBC 0.87 LU632_RS09130 bioB biotin synthase BioB
Vibrio cholerae E7946 ATCC 55056 0.59 CSW01_16820 PTS fructose transporter subunit IIBC 0.70 CSW01_05645 biotin synthase low > 62
Pseudomonas fluorescens GW456-L13 0.55 PfGW456L13_5073 PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) 0.67 PfGW456L13_1147 Biotin synthase (EC 2.8.1.6) low > 87
Pseudomonas sp. RS175 0.55 PFR28_00107 hypothetical protein 0.68 PFR28_04103 Biotin synthase low > 88
Pseudomonas syringae pv. syringae B728a 0.55 Psyr_0823 PTS system D-fructose-specific IIB component (F1P-forming), Frc family / PTS system D-fructose-specific IIC component (F1P-forming), Frc family 0.66 Psyr_4687 biotin synthase low > 86
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_3337 PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) 0.67 Pf6N2E2_4759 Biotin synthase (EC 2.8.1.6) low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.55 Psyr_0823 PTS system D-fructose-specific IIB component (F1P-forming), Frc family / PTS system D-fructose-specific IIC component (F1P-forming), Frc family 0.66 Psyr_4687 biotin synthase low > 86
Pseudomonas fluorescens FW300-N1B4 0.54 Pf1N1B4_1144 PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) 0.67 Pf1N1B4_2487 Biotin synthase (EC 2.8.1.6) low > 87
Pseudomonas fluorescens FW300-N2E3 0.54 AO353_05475 PTS fructose transporter subunit IIBC 0.67 AO353_07525 biotin synthase 0.19 97
Pseudomonas stutzeri RCH2 0.54 Psest_3353 PTS system, fructose-specific, IIB component/PTS system, fructose subfamily, IIC component 0.69 Psest_0411 biotin synthetase low > 67
Marinobacter adhaerens HP15 0.53 HP15_3725 PTS system, fructose-specific IIBC component 0.64 HP15_2486 biotin synthase low > 73
Pseudomonas fluorescens SBW25 0.53 PFLU_RS04020 PTS fructose-like transporter subunit IIB 0.67 PFLU_RS27650 biotin synthase BioB low > 109
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS04020 PTS fructose-like transporter subunit IIB 0.67 PFLU_RS27650 biotin synthase BioB low > 109
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_07325 fructose phosphotransferase system, IIB/IIC components (EC 2.7.1.202) (from data) 0.67 AO356_14135 biotin synthase low > 104
Pseudomonas simiae WCS417 0.51 PS417_03975 FruA 0.67 PS417_26005 biotin synthase low > 88
Pseudomonas putida KT2440 0.49 PP_0795 fructose PTS permease - IIBC component 0.68 PP_0362 Biotin synthase 0.16 35
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS02050 fructose-specific PTS transporter subunit EIIC 0.59 ABZR87_RS06265 biotin synthase BioB low > 80
Paraburkholderia graminis OAS925 0.45 ABIE53_004213 PTS system fructose-specific IIC component 0.57 ABIE53_000577 biotin synthase 0.17 79
Ralstonia solanacearum GMI1000 0.44 RS_RS14320 PTS fructose transporter subunit IIBC 0.58 RS_RS01305 biotin synthase low > 80
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.2174.1 hypothetical protein 0.56 Xcc-8004.505.1 Biotin synthase (EC 2.8.1.6) low > 74
Ralstonia solanacearum PSI07 0.42 RPSI07_RS10870 PTS fructose transporter subunit IIBC 0.58 RPSI07_RS22850 biotin synthase BioB low > 81
Ralstonia solanacearum UW163 0.42 UW163_RS07255 PTS fructose transporter subunit IIBC 0.58 UW163_RS03115 biotin synthase BioB
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS06370 PTS fructose transporter subunit IIBC 0.58 RALBFv3_RS10465 biotin synthase BioB low > 76

Not shown: 2 genomes with orthologs for HER17_RS12855 only; 46 genomes with orthologs for HER17_RS13460 only