Conservation of cofitness between HER17_RS01910 and HER17_RS12260 in Pectobacterium carotovorum WPP14

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS01910 aspartate aminotransferase family protein 1.0 HER17_RS12260 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.81 8
Dickeya dadantii 3937 0.86 DDA3937_RS19450 aspartate aminotransferase family protein 0.90 DDA3937_RS09705 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.78 26
Dickeya dianthicola 67-19 0.86 HGI48_RS19570 aspartate aminotransferase family protein 0.89 HGI48_RS09715 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE low > 71
Dickeya dianthicola ME23 0.86 DZA65_RS20655 aspartate aminotransferase family protein 0.89 DZA65_RS10025 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.66 59
Serratia liquefaciens MT49 0.82 IAI46_23590 aspartate aminotransferase family protein 0.81 IAI46_08180 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE low > 86
Klebsiella michiganensis M5al 0.80 BWI76_RS26000 aspartate aminotransferase family protein 0.83 BWI76_RS18955 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase 0.77 4
Rahnella sp. WP5 0.79 EX31_RS04630 aspartate aminotransferase family protein 0.74 EX31_RS11470 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.82 64
Escherichia coli BW25113 0.79 b3359 argD bifunctional acetylornithine aminotransferase/ succinyldiaminopimelate aminotransferase (NCBI) 0.82 b2026 hisI bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein (NCBI) 0.40 66
Escherichia coli ECOR27 0.79 NOLOHH_09030 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.76 NOLOHH_15800 hisIE bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE low > 75
Enterobacter sp. TBS_079 0.79 MPMX20_04262 Acetylornithine/succinyldiaminopimelate aminotransferase 0.85 MPMX20_03008 Histidine biosynthesis bifunctional protein HisIE 0.64 4
Pantoea sp. MT58 0.79 IAI47_01955 aspartate aminotransferase family protein 0.82 IAI47_07060 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.71 27
Escherichia coli BL21 0.79 ECD_03210 bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase 0.82 ECD_01928 phosphoribosyl-AMP cyclohydrolase and phosphoribosyl-ATP pyrophosphatase low > 61
Escherichia fergusonii Becca 0.79 EFB2_00463 Acetylornithine/succinyldiaminopimelate aminotransferase 0.75 EFB2_01830 Histidine biosynthesis bifunctional protein HisIE low > 86
Escherichia coli ECRC62 0.78 BNILDI_02490 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.80 BNILDI_14710 hisIE bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE low > 75
Escherichia coli Nissle 1917 0.78 ECOLIN_RS19240 bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.75 ECOLIN_RS11975 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE
Escherichia coli ECOR38 0.78 HEPCGN_16055 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.81 HEPCGN_03190 hisIE bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.69 40
Escherichia coli ECRC100 0.78 OKFHMN_17230 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.75 OKFHMN_24485 hisIE bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.80 72
Escherichia coli ECRC102 0.78 NIAGMN_15000 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.75 NIAGMN_22430 hisIE bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE
Escherichia coli ECRC98 0.78 JDDGAC_20860 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.75 JDDGAC_28595 hisIE bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE low > 86
Escherichia coli ECRC101 0.78 MCAODC_07760 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.75 MCAODC_20455 hisIE bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE low > 87
Escherichia coli ECRC99 0.78 KEDOAH_10910 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.75 KEDOAH_03665 hisIE bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.78 GFF3710 Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) 0.74 GFF3906 Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.78 OHPLBJKB_00343 Acetylornithine/succinyldiaminopimelate aminotransferase 0.81 OHPLBJKB_01674 Histidine biosynthesis bifunctional protein HisIE low > 73
Enterobacter asburiae PDN3 0.78 EX28DRAFT_4170 transaminase, acetylornithine/succinylornithine family/succinylornithine transaminase family 0.84 EX28DRAFT_0533 phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19)/phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) 0.67 57
Erwinia tracheiphila SCR3 0.77 LU632_RS22810 aspartate aminotransferase family protein 0.79 LU632_RS08915 hisIE bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.88 10
Shewanella loihica PV-4 0.65 Shew_0578 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) 0.59 Shew_2204 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein (RefSeq) 0.69 47
Shewanella oneidensis MR-1 0.65 SO0617 argD acetylornithine aminotransferase (NCBI ptt file) 0.61 SO2067 hisI phosphoribosyl-ATP pyrophosphatase/phosphoribosyl-AMP cyclohydrolase (NCBI ptt file) 0.70 59
Alteromonas macleodii MIT1002 0.65 MIT1002_00437 Succinylornithine transaminase/acetylornithine aminotransferase 0.63 MIT1002_02639 Phosphoribosyl-ATP pyrophosphatase 0.96 39
Shewanella amazonensis SB2B 0.65 Sama_3011 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) 0.58 Sama_1948 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.65 Shewana3_0610 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) 0.60 Shewana3_1847 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein (RefSeq) 0.83 59
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_13250 aspartate aminotransferase family protein 0.64 CSW01_05780 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase low > 62
Acinetobacter radioresistens SK82 0.60 MPMX26_02251 Succinylornithine transaminase 0.34 MPMX26_00264 Histidine biosynthesis bifunctional protein HisIE low > 36
Lysobacter sp. OAE881 0.48 ABIE51_RS17420 acetylornithine/succinyldiaminopimelate transaminase 0.49 ABIE51_RS13295 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.85 20
Rhodanobacter denitrificans MT42 0.46 LRK55_RS06335 acetylornithine/succinylornithine family transaminase 0.56 LRK55_RS01355 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE low > 63
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS17400 acetylornithine transaminase 0.54 ABZR86_RS06700 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE low > 74
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_17070 astC acetylornithine transaminase 0.55 OKGIIK_04980 hisIE bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE low > 52
Xanthomonas campestris pv. campestris strain 8004 0.44 Xcc-8004.1117.1 hypothetical protein 0.55 Xcc-8004.2942.1 Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) low > 74
Rhodanobacter denitrificans FW104-10B01 0.44 LRK54_RS06590 acetylornithine/succinylornithine family transaminase 0.55 LRK54_RS01575 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE low > 59
Brevundimonas sp. GW460-12-10-14-LB2 0.38 A4249_RS11925 aspartate aminotransferase family protein 0.47 A4249_RS10720 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE
Synechococcus elongatus PCC 7942 0.35 Synpcc7942_0943 argD acetylornithine aminotransferase 0.38 Synpcc7942_1995 hisIE bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein
Parabacteroides merdae CL09T00C40 0.29 HMPREF1078_RS12615 ornithine--oxo-acid transaminase 0.49 HMPREF1078_RS13560 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE low > 61
Bacteroides stercoris CC31F 0.28 HMPREF1181_RS03445 aspartate aminotransferase family protein 0.49 HMPREF1181_RS11065 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.92 28
Bacteroides thetaiotaomicron VPI-5482 0.28 BT3758 N-succinylornithine aminotransferase (EC 2.6.1.81) (from data) 0.48 BT1377 phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase (NCBI ptt file) 0.78 35
Phocaeicola dorei CL03T12C01 0.27 ABI39_RS02965 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme 0.50 ABI39_RS19935 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.79 10
Bacteroides ovatus ATCC 8483 0.27 BACOVA_03588 aminotransferase, class III 0.49 BACOVA_00218 phosphoribosyl-ATP diphosphatase 0.90 38
Phocaeicola vulgatus CL09T03C04 0.27 HMPREF1058_RS15260 ornithine--oxo-acid transaminase 0.50 HMPREF1058_RS06180 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE low > 67
Mucilaginibacter yixingensis YX-36 DSM 26809 0.26 ABZR88_RS15500 aspartate aminotransferase family protein 0.52 ABZR88_RS06845 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE
Pontibacter actiniarum KMM 6156, DSM 19842 0.25 CA264_15645 ornithine--oxo-acid transaminase 0.46 CA264_05115 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase low > 74

Not shown: 53 genomes with orthologs for HER17_RS01910 only; 2 genomes with orthologs for HER17_RS12260 only