Conservation of cofitness between HER17_RS02600 and HER17_RS11800 in Pectobacterium carotovorum WPP14

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02600 protease modulator HflC 1.0 HER17_RS11800 murein DD-endopeptidase MepM 0.79 15
Dickeya dadantii 3937 0.82 DDA3937_RS18595 protease modulator HflC 0.76 DDA3937_RS10105 murein DD-endopeptidase MepM
Dickeya dianthicola ME23 0.82 DZA65_RS19665 protease modulator HflC 0.77 DZA65_RS10550 murein DD-endopeptidase MepM 0.61 31
Dickeya dianthicola 67-19 0.82 HGI48_RS18530 protease modulator HflC 0.77 HGI48_RS10135 murein DD-endopeptidase MepM low > 71
Serratia liquefaciens MT49 0.81 IAI46_01640 protease modulator HflC 0.82 IAI46_14600 murein DD-endopeptidase MepM 0.62 64
Erwinia tracheiphila SCR3 0.79 LU632_RS02070 hflC protease modulator HflC 0.71 LU632_RS13390 mepM murein DD-endopeptidase MepM low > 74
Pantoea sp. MT58 0.77 IAI47_02605 protease modulator HflC 0.74 IAI47_08470 murein DD-endopeptidase MepM low > 76
Rahnella sp. WP5 0.77 EX31_RS08805 protease modulator HflC 0.73 EX31_RS10670 murein DD-endopeptidase MepM low > 89
Escherichia fergusonii Becca 0.77 EFB2_04360 Modulator of FtsH protease HflC 0.77 EFB2_02086 Murein DD-endopeptidase MepM low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF828 HflC protein 0.77 GFF1635 Cell wall endopeptidase, family M23/M37 low > 78
Escherichia coli ECOR38 0.77 HEPCGN_10470 hflC protease modulator HflC 0.77 HEPCGN_04715 mepM murein DD-endopeptidase MepM low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.77 OHPLBJKB_03867 Modulator of FtsH protease HflC 0.77 OHPLBJKB_01872 Murein DD-endopeptidase MepM 0.67 5
Escherichia coli BW25113 0.77 b4175 hflC modulator for HflB protease specific for phage lambda cII repressor (NCBI) 0.77 b1856 yebA orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECOR27 0.77 NOLOHH_04505 hflC protease modulator HflC 0.77 NOLOHH_16750 mepM murein DD-endopeptidase MepM low > 75
Escherichia coli ECRC101 0.77 MCAODC_02755 hflC protease modulator HflC 0.77 MCAODC_19095 mepM murein DD-endopeptidase MepM low > 87
Escherichia coli ECRC100 0.77 OKFHMN_12240 hflC protease modulator HflC 0.77 OKFHMN_26310 mepM murein DD-endopeptidase MepM low > 80
Escherichia coli ECRC102 0.77 NIAGMN_10090 hflC protease modulator HflC 0.77 NIAGMN_01750 mepM murein DD-endopeptidase MepM
Escherichia coli ECRC98 0.77 JDDGAC_15880 hflC protease modulator HflC 0.77 JDDGAC_00885 mepM murein DD-endopeptidase MepM low > 86
Escherichia coli ECRC99 0.77 KEDOAH_15915 hflC protease modulator HflC 0.77 KEDOAH_01795 mepM murein DD-endopeptidase MepM
Escherichia coli ECRC62 0.77 BNILDI_06985 hflC protease modulator HflC 0.77 BNILDI_15540 mepM murein DD-endopeptidase MepM low > 75
Escherichia coli BL21 0.77 ECD_04042 HflB protease modulator specific for phage lambda cII repressor 0.77 ECD_01827 murein DD-endopeptidase, space-maker hydrolase, septation protein low > 61
Escherichia coli Nissle 1917 0.77 ECOLIN_RS24245 protease modulator HflC 0.77 ECOLIN_RS10340 murein DD-endopeptidase MepM
Klebsiella michiganensis M5al 0.75 BWI76_RS02550 protease modulator HflC 0.76 BWI76_RS18125 murein DD-endopeptidase MepM low > 92
Enterobacter sp. TBS_079 0.74 MPMX20_00456 Modulator of FtsH protease HflC 0.78 MPMX20_02761 Murein DD-endopeptidase MepM low > 85
Enterobacter asburiae PDN3 0.73 EX28DRAFT_3372 HflC protein 0.77 EX28DRAFT_0700 Membrane proteins related to metalloendopeptidases low > 76
Vibrio cholerae E7946 ATCC 55056 0.49 CSW01_01850 protease modulator HflC 0.30 CSW01_02665 peptidase M23 low > 62
Shewanella sp. ANA-3 0.48 Shewana3_0600 HflC protein (RefSeq) 0.29 Shewana3_2610 peptidase M23B (RefSeq)
Shewanella oneidensis MR-1 0.47 SO0606 hflC hflC protein (NCBI ptt file) 0.29 SO2842 peptidase, M23/M37 family (NCBI ptt file)
Shewanella loihica PV-4 0.46 Shew_0569 HflC protein (RefSeq) 0.26 Shew_2455 peptidase M23B (RefSeq) low > 60
Shewanella amazonensis SB2B 0.45 Sama_3022 hflC protein (RefSeq) 0.28 Sama_1269 M24/M37 family peptidase (RefSeq)
Marinobacter adhaerens HP15 0.31 HP15_2496 HflC 0.20 HP15_357 peptidase M23B
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_3611 HflC protein 0.22 Pf6N2E2_4839 Cell wall endopeptidase, family M23/M37
Pseudomonas syringae pv. syringae B728a ΔmexB 0.31 Psyr_0575 protease FtsH subunit HflC 0.22 Psyr_4566 Peptidase M23B
Pseudomonas syringae pv. syringae B728a 0.31 Psyr_0575 protease FtsH subunit HflC 0.22 Psyr_4566 Peptidase M23B low > 86
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_13160 membrane protease HflC 0.22 AO353_07140 peptidase M23 0.23 50
Pseudomonas stutzeri RCH2 0.29 Psest_0686 Membrane protease subunits, stomatin/prohibitin homologs 0.23 Psest_3636 Membrane proteins related to metalloendopeptidases
Pseudomonas putida KT2440 0.29 PP_4891 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex 0.23 PP_0435 Peptidase, M23/M37 family 0.32 23
Azospirillum sp. SherDot2 0.29 MPMX19_01250 Modulator of FtsH protease HflC 0.17 MPMX19_02457 hypothetical protein
Magnetospirillum magneticum AMB-1 0.27 AMB_RS17655 protease modulator HflC 0.21 AMB_RS04600 membrane protein
Castellaniella sp019104865 MT123 0.27 ABCV34_RS02665 protease modulator HflC 0.17 ABCV34_RS10570 peptidoglycan DD-metalloendopeptidase family protein
Azospirillum brasilense Sp245 0.27 AZOBR_RS06525 membrane protein 0.17 AZOBR_RS30530 peptidase M23 low > 97
Desulfovibrio vulgaris Miyazaki F 0.26 DvMF_2675 HflC protein (RefSeq) 0.17 DvMF_2080 Peptidase M23 (RefSeq) low > 51
Desulfovibrio vulgaris Hildenborough JW710 0.25 DVU0683 hflC protein, putative (TIGR) 0.15 DVU3395 peptidase, M23/M37 family (TIGR) low > 55
Variovorax sp. SCN45 0.23 GFF1003 HflC protein 0.13 GFF2065 Peptidase, M23/M37 family low > 127

Not shown: 41 genomes with orthologs for HER17_RS02600 only; 0 genomes with orthologs for HER17_RS11800 only