| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pectobacterium carotovorum WPP14 | 1.0 | HER17_RS00495 | | branched-chain amino acid ABC transporter substrate-binding protein | 1.0 | HER17_RS11270 | | ribonuclease D | 0.95 | 13 |
| Dickeya dadantii 3937 | 0.91 | DDA3937_RS00660 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.79 | DDA3937_RS11220 | | ribonuclease D | low | > 74 |
| Rahnella sp. WP5 | 0.88 | EX31_RS14805 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.68 | EX31_RS10595 | | ribonuclease D | low | > 89 |
| Dickeya dianthicola 67-19 | 0.88 | HGI48_RS20730 | | high-affinity branched-chain amino acid ABC transporter substrate-binding protein | 0.78 | HGI48_RS11255 | | ribonuclease D | low | > 71 |
| Dickeya dianthicola ME23 | 0.88 | DZA65_RS21740 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.78 | DZA65_RS11600 | | ribonuclease D | low | > 75 |
| Serratia liquefaciens MT49 | 0.87 | IAI46_00960 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.74 | IAI46_14530 | | ribonuclease D | low | > 86 |
| Erwinia tracheiphila SCR3 | 0.82 | LU632_RS19255 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.58 | LU632_RS13130 | rnd | ribonuclease D | low | > 74 |
| Escherichia coli ECRC100 | 0.79 | OKFHMN_16740 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | 0.67 | OKFHMN_26605 | rnd | ribonuclease D | low | > 80 |
| Escherichia coli ECRC98 | 0.79 | JDDGAC_20370 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | 0.67 | JDDGAC_01180 | rnd | ribonuclease D | low | > 86 |
| Escherichia coli ECOR27 | 0.79 | NOLOHH_08535 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | 0.67 | NOLOHH_17125 | rnd | ribonuclease D | low | > 75 |
| Escherichia coli ECRC101 | 0.79 | MCAODC_07270 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | 0.67 | MCAODC_18805 | rnd | ribonuclease D | low | > 87 |
| Escherichia coli BW25113 | 0.79 | b3458 | livK | leucine transporter subunit (NCBI) | 0.68 | b1804 | rnd | ribonuclease D (NCBI) | low | > 76 |
| Escherichia coli ECRC62 | 0.79 | BNILDI_02970 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | 0.67 | BNILDI_15910 | rnd | ribonuclease D | low | > 75 |
| Escherichia coli ECRC99 | 0.79 | KEDOAH_11400 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | 0.67 | KEDOAH_01505 | rnd | ribonuclease D | — | — |
| Escherichia coli ECRC102 | 0.79 | NIAGMN_14510 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | 0.67 | NIAGMN_01460 | rnd | ribonuclease D | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.79 | OHPLBJKB_00245 | | Leucine-specific-binding protein | 0.67 | OHPLBJKB_01929 | | Ribonuclease D | low | > 73 |
| Escherichia fergusonii Becca | 0.79 | EFB2_00364 | | Leucine-specific-binding protein | 0.67 | EFB2_02196 | | Ribonuclease D | low | > 86 |
| Escherichia coli ECOR38 | 0.79 | HEPCGN_15560 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | 0.67 | HEPCGN_04995 | rnd | ribonuclease D | low | > 87 |
| Escherichia coli Nissle 1917 | 0.79 | ECOLIN_RS19775 | | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | 0.67 | ECOLIN_RS10035 | | ribonuclease D | — | — |
| Enterobacter asburiae PDN3 | 0.79 | EX28DRAFT_4290 | | ABC-type branched-chain amino acid transport systems, periplasmic component | 0.67 | EX28DRAFT_0755 | | ribonuclease D | low | > 76 |
| Escherichia coli BL21 | 0.78 | ECD_03307 | | leucine transporter subunit | 0.68 | ECD_01774 | | ribonuclease D | low | > 61 |
| Enterobacter sp. TBS_079 | 0.78 | MPMX20_04334 | | Leucine-specific-binding protein | 0.68 | MPMX20_02710 | | Ribonuclease D | low | > 85 |
| Pantoea sp. MT58 | 0.78 | IAI47_01565 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.62 | IAI47_08840 | | ribonuclease D | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.77 | GFF545 | | High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) | 0.66 | GFF2819 | | Ribonuclease D (EC 3.1.26.3) | low | > 78 |
| Klebsiella michiganensis M5al | 0.77 | BWI76_RS26350 | | branched chain amino acid ABC transporter substrate-binding protein | 0.67 | BWI76_RS17795 | | ribonuclease D | low | > 92 |
| Pseudomonas syringae pv. syringae B728a | 0.62 | Psyr_3845 | | L-leucine-binding protein / L-valine-binding protein / L-isoleucine-binding protein | 0.28 | Psyr_1563 | | Ribonuclease D | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.62 | Psyr_3845 | | L-leucine-binding protein / L-valine-binding protein / L-isoleucine-binding protein | 0.28 | Psyr_1563 | | Ribonuclease D | low | > 86 |
| Pseudomonas stutzeri RCH2 | 0.61 | Psest_1312 | | ABC-type branched-chain amino acid transport systems, periplasmic component | 0.27 | Psest_2995 | | ribonuclease D | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.61 | AO356_05320 | | leucine ABC transporter substrate-binding protein | 0.29 | AO356_04420 | | ribonuclease D | low | > 104 |
| Pseudomonas fluorescens FW300-N2E3 | 0.61 | AO353_17125 | | leucine ABC transporter substrate-binding protein | 0.29 | AO353_17855 | | ribonuclease D | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.60 | Pf1N1B4_3218 | | High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) | 0.29 | Pf1N1B4_3345 | | Ribonuclease D (EC 3.1.26.3) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.60 | Pf6N2E2_2921 | | ABC transporter for L-leucine/L-phenylalanine/D-alanine, substrate-binding component LivK (from data) | 0.29 | Pf6N2E2_2727 | | Ribonuclease D (EC 3.1.26.3) | low | > 103 |
| Pseudomonas fluorescens GW456-L13 | 0.60 | PfGW456L13_4606 | | High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) | 0.29 | PfGW456L13_4496 | | Ribonuclease D (EC 3.1.26.3) | low | > 87 |
| Pseudomonas sp. S08-1 | 0.60 | OH686_04605 | | Branched-chain amino acid ABC transporter, substrate-binding protein LivJ | 0.28 | OH686_05315 | | ribonuclease D | 0.83 | 15 |
| Pseudomonas putida KT2440 | 0.59 | PP_1141 | | branched-chain amino acids ABC transporter - periplasmic leucine binding subunit | 0.27 | PP_4591 | | Ribonuclease D | low | > 96 |
| Pseudomonas sp. RS175 | 0.59 | PFR28_00540 | | Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein | 0.29 | PFR28_00712 | | Ribonuclease D | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.59 | PFLU_RS06645 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.27 | PFLU_RS07465 | | ribonuclease D | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.59 | PFLU_RS06645 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.27 | PFLU_RS07465 | | ribonuclease D | low | > 109 |
| Pseudomonas simiae WCS417 | 0.59 | PS417_06615 | | ABC transporter for branched-chain amino acids, substrate-binding component (from data) | 0.27 | PS417_07375 | | ribonuclease D | low | > 88 |
| Marinobacter adhaerens HP15 | 0.58 | HP15_3055 | | high-affinity leucine-specific leucine-specific-binding periplasmic protein of high-affinity branched-chain amino acid ABC transporter transport system periplasmic binding protein | 0.22 | HP15_1882 | | ribonuclease D | low | > 73 |
| Azospirillum sp. SherDot2 | 0.38 | MPMX19_04840 | | Leu/Ile/Val-binding protein | 0.20 | MPMX19_00986 | | Ribonuclease D | low | > 112 |
| Rhodospirillum rubrum S1H | 0.38 | Rru_A1746 | | Extracellular ligand-binding receptor (NCBI) | 0.22 | Rru_A2073 | | Ribonuclease D (NCBI) | — | — |
| Sinorhizobium meliloti 1021 | 0.37 | SMc00078 | | Leu/Ile/Val-binding protein | 0.20 | SMc00622 | | ribonuclease D protein | low | > 103 |
| Rhodopseudomonas palustris CGA009 | 0.37 | TX73_019730 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.19 | TX73_015755 | | ribonuclease D | low | > 86 |
| Magnetospirillum magneticum AMB-1 | 0.35 | AMB_RS15010 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.22 | AMB_RS14275 | | ribonuclease D | — | — |
| Rhizobium sp. OAE497 | 0.35 | ABIE40_RS14690 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.20 | ABIE40_RS06640 | | ribonuclease D | — | — |
| Bosea sp. OAE506 | 0.35 | ABIE41_RS13610 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.20 | ABIE41_RS16115 | | ribonuclease D | — | — |
| Azospirillum brasilense Sp245 | 0.33 | AZOBR_RS08260 | | L-proline and D-alanine ABC transporter, substrate-binding component (from data) | 0.20 | AZOBR_RS16220 | | ribonuclease D | low | > 97 |
| Agrobacterium fabrum C58 | 0.33 | Atu2422 | | ABC transporter, substrate binding protein (amino acid) | 0.19 | Atu1151 | | ribonuclease D | — | — |
| Dinoroseobacter shibae DFL-12 | 0.12 | Dshi_1522 | | Extracellular ligand-binding receptor (RefSeq) | 0.17 | Dshi_1887 | | ribonuclease D (RefSeq) | low | > 64 |
| Phaeobacter inhibens DSM 17395 | 0.10 | PGA1_c15890 | | extracellular ligand-binding receptor | 0.17 | PGA1_c13290 | | putative ribonuclease D | — | — |
Not shown: 19 genomes with orthologs for HER17_RS00495 only; 17 genomes with orthologs for HER17_RS11270 only