Conservation of cofitness between HER17_RS12930 and HER17_RS05700 in Pectobacterium carotovorum WPP14

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12930 microcin C ABC transporter permease 1.0 HER17_RS05700 aldo/keto reductase 0.53 17
Dickeya dianthicola 67-19 0.87 HGI48_RS09220 ABC transporter permease subunit 0.50 HGI48_RS12715 aldo/keto reductase low > 71
Dickeya dadantii 3937 0.87 DDA3937_RS09180 ABC transporter permease subunit 0.86 DDA3937_RS02920 aldo/keto reductase low > 74
Dickeya dianthicola ME23 0.85 DZA65_RS09525 ABC transporter permease subunit 0.51 DZA65_RS13170 aldo/keto reductase low > 75
Serratia liquefaciens MT49 0.79 IAI46_17325 ABC transporter permease subunit 0.79 IAI46_04660 aldo/keto reductase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.76 GFF3757 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.23 GFF4323 FIG00553873: hypothetical protein low > 78
Klebsiella michiganensis M5al 0.75 BWI76_RS19790 putative binding-protein-dependent transporter 0.29 BWI76_RS09015 aldo/keto reductase low > 92
Enterobacter sp. TBS_079 0.74 MPMX20_03145 Inner membrane ABC transporter permease protein YejE 0.31 MPMX20_01452 1-deoxyxylulose-5-phosphate synthase YajO low > 85
Enterobacter asburiae PDN3 0.74 EX28DRAFT_0382 ABC-type uncharacterized transport system, permease component 0.31 EX28DRAFT_2164 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) low > 76
Rahnella sp. WP5 0.73 EX31_RS19140 ABC transporter permease subunit 0.28 EX31_RS07070 aldo/keto reductase low > 89
Pseudomonas sp. S08-1 0.65 OH686_03610 ABC transporter, permease protein 2 0.60 OH686_18660 Oxidoreductase low > 80
Pseudomonas syringae pv. syringae B728a 0.64 Psyr_1756 Binding-protein-dependent transport systems inner membrane component 0.26 Psyr_5007 Aldo/keto reductase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.64 Psyr_1756 Binding-protein-dependent transport systems inner membrane component 0.26 Psyr_5007 Aldo/keto reductase low > 86
Azospirillum sp. SherDot2 0.64 MPMX19_02170 Inner membrane ABC transporter permease protein YejE 0.26 MPMX19_05431 1-deoxyxylulose-5-phosphate synthase YajO low > 112
Pseudomonas sp. RS175 0.63 PFR28_01547 Inner membrane ABC transporter permease protein YejE 0.24 PFR28_02472 1-deoxyxylulose-5-phosphate synthase YajO low > 88
Pseudomonas fluorescens SBW25 0.63 PFLU_RS12885 ABC transporter permease 0.24 PFLU_RS14620 aldo/keto reductase low > 109
Pseudomonas fluorescens SBW25-INTG 0.63 PFLU_RS12885 ABC transporter permease 0.24 PFLU_RS14620 aldo/keto reductase low > 109
Pseudomonas fluorescens GW456-L13 0.62 PfGW456L13_3345 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.62 PfGW456L13_2994 Oxidoreductase low > 87
Pseudomonas fluorescens FW300-N2E2 0.62 Pf6N2E2_582 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.50 Pf6N2E2_1760 Oxidoreductase low > 103
Rhizobium sp. OAE497 0.62 ABIE40_RS00625 ABC transporter permease 0.29 ABIE40_RS03605 aldo/keto reductase low > 107
Pseudomonas fluorescens FW300-N2C3 0.62 AO356_24455 ABC transporter permease 0.50 AO356_29740 oxidoreductase low > 104
Pseudomonas fluorescens FW300-N2E3 0.62 AO353_23465 ABC transporter permease 0.24 AO353_26915 NADP-dependent oxidoreductase low > 101
Pseudomonas fluorescens FW300-N1B4 0.62 Pf1N1B4_4591 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.24 Pf1N1B4_5001 Oxidoreductase, aldo/keto reductase family — —
Pseudomonas simiae WCS417 0.61 PS417_12195 ABC transporter permease 0.61 PS417_12400 oxidoreductase low > 88
Rhodopseudomonas palustris CGA009 0.60 TX73_019115 ABC transporter permease 0.26 TX73_008500 aldo/keto reductase low > 86
Agrobacterium fabrum C58 0.58 Atu0189 ABC transporter, membrane spanning protein (peptide) 0.37 Atu4868 oxidoreductase low > 89
Sinorhizobium meliloti 1021 0.57 SMc02830 ABC transporter permease 0.27 SMc04056 oxidoreductase — —
Dinoroseobacter shibae DFL-12 0.55 Dshi_0657 binding-protein-dependent transport systems inner membrane component (RefSeq) 0.27 Dshi_0524 aldo/keto reductase (RefSeq) low > 64
Variovorax sp. SCN45 0.52 GFF227 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) 0.45 GFF3212 Oxidoreductase low > 127
Paraburkholderia bryophila 376MFSha3.1 0.51 H281DRAFT_00562 microcin C transport system permease protein 0.30 H281DRAFT_02924 Predicted oxidoreductase low > 103
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS07165 peptide ABC transporter permease 0.28 BPHYT_RS27090 aldo/keto reductase low > 109
Paraburkholderia graminis OAS925 0.50 ABIE53_002548 microcin C transport system permease protein 0.51 ABIE53_002691 aryl-alcohol dehydrogenase-like predicted oxidoreductase low > 113
Ralstonia solanacearum PSI07 0.49 RPSI07_RS18330 ABC transporter permease 0.24 RPSI07_RS06465 aldo/keto reductase low > 81
Ralstonia solanacearum GMI1000 0.49 RS_RS05860 ABC transporter permease 0.24 RS_RS24225 aldo/keto reductase low > 80
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS13375 peptide ABC transporter permease 0.25 RR42_RS26360 alcohol dehydrogenase low > 128
Ralstonia solanacearum IBSBF1503 0.48 RALBFv3_RS15045 ABC transporter permease 0.25 RALBFv3_RS17145 aldo/keto reductase low > 76
Ralstonia sp. UNC404CL21Col 0.48 ABZR87_RS10690 ABC transporter permease 0.29 ABZR87_RS20800 aldo/keto reductase low > 80
Variovorax sp. OAS795 0.47 ABID97_RS16510 ABC transporter permease 0.30 ABID97_RS16250 aldo/keto reductase low > 91

Not shown: 30 genomes with orthologs for HER17_RS12930 only; 6 genomes with orthologs for HER17_RS05700 only