Conservation of cofitness between HER17_RS12030 and HER17_RS04240 in Pectobacterium carotovorum WPP14

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12030 aspartate/tyrosine/aromatic aminotransferase 1.0 HER17_RS04240 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.92 3
Serratia liquefaciens MT49 0.88 IAI46_08750 aspartate/tyrosine/aromatic aminotransferase 0.87 IAI46_03690 assimilatory sulfite reductase (NADPH) hemoprotein subunit low > 86
Escherichia coli ECRC62 0.87 BNILDI_20195 aspC aspartate transaminase 0.84 BNILDI_10740 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.87 OHPLBJKB_02738 Aspartate aminotransferase 0.85 OHPLBJKB_00970 Sulfite reductase [NADPH] hemoprotein beta-component low > 73
Escherichia coli BW25113 0.87 b0928 aspC aspartate aminotransferase, PLP-dependent (NCBI) 0.84 b2763 cysI sulfite reductase, beta subunit, NAD(P)-binding, heme-binding (NCBI) 0.56 54
Escherichia coli ECOR38 0.87 HEPCGN_23140 aspC aspartate transaminase 0.84 HEPCGN_19090 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit low > 87
Escherichia coli BL21 0.87 ECD_00932 aspartate aminotransferase, PLP-dependent 0.84 ECD_02608 sulfite reductase, beta subunit, NAD(P)-binding, heme-binding
Escherichia coli ECOR27 0.87 NOLOHH_21940 aspC aspartate transaminase 0.84 NOLOHH_12190 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.80 29
Rahnella sp. WP5 0.86 EX31_RS18145 aspartate/tyrosine/aromatic aminotransferase 0.85 EX31_RS07900 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.56 11
Escherichia coli Nissle 1917 0.86 ECOLIN_RS04910 aspartate transaminase 0.84 ECOLIN_RS15405 assimilatory sulfite reductase (NADPH) hemoprotein subunit
Escherichia fergusonii Becca 0.86 EFB2_03136 Aspartate aminotransferase 0.84 EFB2_01154 Sulfite reductase [NADPH] hemoprotein beta-component low > 86
Escherichia coli ECRC101 0.86 MCAODC_24775 aspC aspartate transaminase 0.84 MCAODC_10900 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.78 9
Escherichia coli ECRC100 0.86 OKFHMN_05385 aspC aspartate transaminase 0.84 OKFHMN_20375 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit low > 80
Escherichia coli ECRC99 0.86 KEDOAH_22350 aspC aspartate transaminase 0.84 KEDOAH_07750 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit
Escherichia coli ECRC102 0.86 NIAGMN_03105 aspC aspartate transaminase 0.84 NIAGMN_18145 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit
Escherichia coli ECRC98 0.86 JDDGAC_08995 aspC aspartate transaminase 0.84 JDDGAC_24040 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit low > 86
Dickeya dianthicola 67-19 0.86 HGI48_RS12990 aspartate/tyrosine/aromatic aminotransferase 0.87 HGI48_RS17010 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.83 7
Klebsiella michiganensis M5al 0.86 BWI76_RS09870 aromatic amino acid aminotransferase 0.84 BWI76_RS22760 sulfite reductase subunit beta 0.30 35
Enterobacter sp. TBS_079 0.86 MPMX20_01586 Aspartate aminotransferase 0.85 MPMX20_03642 Sulfite reductase [NADPH] hemoprotein beta-component 0.58 2
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF3685 Aspartate aminotransferase (EC 2.6.1.1) 0.84 GFF4819 Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) low > 78
Dickeya dadantii 3937 0.85 DDA3937_RS12915 aspartate/tyrosine/aromatic aminotransferase 0.87 DDA3937_RS16940 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.66 59
Enterobacter asburiae PDN3 0.85 EX28DRAFT_2008 Aspartate/tyrosine/aromatic aminotransferase 0.85 EX28DRAFT_2852 sulfite reductase (NADPH) hemoprotein, beta-component low > 76
Dickeya dianthicola ME23 0.85 DZA65_RS13450 aspartate/tyrosine/aromatic aminotransferase 0.87 DZA65_RS18085 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.55 70
Pantoea sp. MT58 0.84 IAI47_12765 aspartate/tyrosine/aromatic aminotransferase 0.84 IAI47_04155 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.35 27
Erwinia tracheiphila SCR3 0.83 LU632_RS09905 aspartate/tyrosine/aromatic aminotransferase 0.83 LU632_RS06405 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.85 16
Shewanella loihica PV-4 0.66 Shew_1999 aromatic amino acid aminotransferase (RefSeq) 0.57 Shew_0666 sulfite reductase subunit beta (RefSeq) low > 60
Shewanella sp. ANA-3 0.64 Shewana3_2121 aromatic amino acid aminotransferase (RefSeq) 0.59 Shewana3_0856 sulfite reductase subunit beta (RefSeq) 0.60 20
Shewanella amazonensis SB2B 0.64 Sama_1805 aromatic amino acid aminotransferase (RefSeq) 0.71 Sama_2838 sulfite reductase subunit beta (RefSeq) low > 62
Shewanella oneidensis MR-1 0.64 SO2350 aspC-1 aspartate aminotransferase (NCBI ptt file) 0.58 SO3737 cysI sulfite reductase (NADPH) hemoprotein beta-component (cysI) (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_06530 aromatic amino acid aminotransferase 0.74 CSW01_02015 assimilatory sulfite reductase (NADPH) hemoprotein subunit low > 62
Castellaniella sp019104865 MT123 0.49 ABCV34_RS05115 amino acid aminotransferase 0.46 ABCV34_RS00215 assimilatory sulfite reductase (NADPH) hemoprotein subunit
Xanthomonas campestris pv. campestris strain 8004 0.49 Xcc-8004.130.1 hypothetical protein 0.45 Xcc-8004.1257.1 Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) low > 74
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_13195 Aminotransferase 0.45 OKGIIK_05965 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit low > 52
Pseudomonas fluorescens FW300-N2E2 0.47 Pf6N2E2_2632 tyrosine aminotransferase (EC 2.6.1.57) (from data) 0.06 Pf6N2E2_2073 Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) low > 103
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_03985 L-phenylalanine transaminase (EC 2.6.1.57) (from data) 0.06 AO356_00555 sulfite reductase low > 104
Rhodanobacter denitrificans FW104-10B01 0.46 LRK54_RS10685 aspartate/tyrosine/aromatic aminotransferase 0.45 LRK54_RS00925 assimilatory sulfite reductase (NADPH) hemoprotein subunit low > 59
Pseudomonas fluorescens GW456-L13 0.46 PfGW456L13_4396 tyrosine aminotransferase (EC 2.6.1.57) (from data) 0.06 PfGW456L13_2843 Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) low > 87
Pseudomonas simiae WCS417 0.46 PS417_19910 aromatic amino acid aminotransferase 0.06 PS417_12290 sulfite reductase low > 88
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS21880 aspartate/tyrosine/aromatic aminotransferase 0.06 PFLU_RS12980 nitrite/sulfite reductase low > 109
Pseudomonas fluorescens SBW25 0.46 PFLU_RS21880 aspartate/tyrosine/aromatic aminotransferase 0.06 PFLU_RS12980 nitrite/sulfite reductase low > 109
Pseudomonas sp. RS175 0.46 PFR28_00800 Aspartate aminotransferase 0.06 PFR28_01366 Sulfite reductase [ferredoxin] low > 88
Alteromonas macleodii MIT1002 0.45 MIT1002_02269 Aspartate aminotransferase 0.76 MIT1002_03379 Sulfite reductase [NADPH] hemoprotein beta-component
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_1973 Aspartate transaminase 0.06 Psyr_2462 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region 0.51 15
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_1973 Aspartate transaminase 0.06 Psyr_2462 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region low > 86
Sphingomonas koreensis DSMZ 15582 0.41 Ga0059261_1688 Aspartate/tyrosine/aromatic aminotransferase 0.08 Ga0059261_1498 Sulfite reductase, beta subunit (hemoprotein) low > 68
Phaeobacter inhibens DSM 17395 0.40 PGA1_c29420 aromatic-amino-acid transaminase [EC:2.6.1.57] (from data) 0.08 PGA1_c20760 putative nitrite/sulfite reductase
Azospirillum sp. SherDot2 0.39 MPMX19_05266 Aspartate aminotransferase 0.08 MPMX19_00652 Sulfite reductase [ferredoxin] low > 112

Not shown: 5 genomes with orthologs for HER17_RS12030 only; 21 genomes with orthologs for HER17_RS04240 only