Conservation of cofitness between HER17_RS12495 and HER17_RS03235 in Pectobacterium carotovorum WPP14

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12495 putrescine ABC transporter ATP-binding subunit PotG 1.0 HER17_RS03235 protein transport protein HofC 0.51 20
Dickeya dadantii 3937 0.95 DDA3937_RS09465 putrescine ABC transporter ATP-binding subunit PotG 0.51 DDA3937_RS17970 protein transport protein HofC low > 74
Dickeya dianthicola ME23 0.93 DZA65_RS09795 putrescine ABC transporter ATP-binding subunit PotG 0.51 DZA65_RS19050 protein transport protein HofC low > 75
Dickeya dianthicola 67-19 0.93 HGI48_RS09485 putrescine ABC transporter ATP-binding subunit PotG 0.51 HGI48_RS17905 protein transport protein HofC low > 71
Rahnella sp. WP5 0.91 EX31_RS09625 putrescine ABC transporter ATP-binding subunit PotG 0.42 EX31_RS03530 protein transport protein HofC low > 89
Serratia liquefaciens MT49 0.90 IAI46_08375 putrescine ABC transporter ATP-binding subunit PotG 0.47 IAI46_03515 protein transport protein HofC low > 86
Pantoea sp. MT58 0.89 IAI47_13040 putrescine ABC transporter ATP-binding subunit PotG 0.40 IAI47_15860 protein transport protein HofC low > 76
Enterobacter asburiae PDN3 0.89 EX28DRAFT_2098 spermidine/putrescine ABC transporter ATP-binding subunit 0.30 EX28DRAFT_3699 Type II secretory pathway, component PulF low > 76
Escherichia coli BW25113 0.89 b0855 potG ATP-binding component of putrescine transport system (VIMSS) 0.35 b0106 hofC assembly protein in type IV pilin biogenesis, transmembrane protein (NCBI) low > 76
Escherichia coli BL21 0.89 ECD_00860 putrescine ABC transporter ATPase 0.35 ECD_00105 assembly protein in type IV pilin biogenesis, transmembrane protein low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.89 OHPLBJKB_02813 Spermidine/putrescine import ATP-binding protein PotA 0.35 OHPLBJKB_03555 Type II secretion system protein F low > 73
Escherichia coli ECRC102 0.89 NIAGMN_04000 potG putrescine ABC transporter ATP-binding subunit PotG 0.35 NIAGMN_08395 hofC protein transport protein HofC — —
Escherichia fergusonii Becca 0.89 EFB2_03206 Spermidine/putrescine import ATP-binding protein PotA 0.34 EFB2_03943 Type II secretion system protein F low > 86
Escherichia coli ECRC99 0.89 KEDOAH_21955 potG putrescine ABC transporter ATP-binding subunit PotG 0.35 KEDOAH_17610 hofC protein transport protein HofC — —
Escherichia coli ECRC100 0.89 OKFHMN_05955 potG putrescine ABC transporter ATP-binding subunit PotG 0.35 OKFHMN_10545 hofC protein transport protein HofC low > 80
Escherichia coli ECRC101 0.89 MCAODC_25170 potG putrescine ABC transporter ATP-binding subunit PotG 0.35 MCAODC_01060 hofC protein transport protein HofC low > 87
Escherichia coli ECRC98 0.89 JDDGAC_09590 potG putrescine ABC transporter ATP-binding subunit PotG 0.35 JDDGAC_14140 hofC protein transport protein HofC low > 86
Escherichia coli ECRC62 0.89 BNILDI_20580 potG putrescine ABC transporter ATP-binding subunit PotG 0.35 BNILDI_08720 hofC protein transport protein HofC low > 75
Enterobacter sp. TBS_079 0.89 MPMX20_01496 Spermidine/putrescine import ATP-binding protein PotA 0.32 MPMX20_00797 Type II secretion system protein F low > 85
Escherichia coli ECOR27 0.89 NOLOHH_22325 potG putrescine ABC transporter ATP-binding subunit PotG 0.35 NOLOHH_02890 hofC protein transport protein HofC low > 75
Escherichia coli Nissle 1917 0.89 ECOLIN_RS04555 putrescine ABC transporter ATP-binding subunit PotG 0.34 ECOLIN_RS00565 protein transport protein HofC — —
Klebsiella michiganensis M5al 0.88 BWI76_RS09465 polyamine ABC transporter ATP-binding protein 0.36 BWI76_RS04830 type IV pilin biogenesis protein low > 92
Escherichia coli ECOR38 0.88 HEPCGN_02075 potG putrescine ABC transporter ATP-binding subunit PotG 0.34 HEPCGN_08525 hofC protein transport protein HofC low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.88 GFF759 Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2) 0.34 GFF133 Type IV fimbrial assembly protein PilC low > 78
Shewanella amazonensis SB2B 0.60 Sama_2641 polyamine ABC transporter, ATP-binding protein (RefSeq) 0.26 Sama_0368 type IV pilus biogenesis protein PilC (RefSeq) low > 62
Shewanella loihica PV-4 0.60 Shew_0974 spermidine/putrescine ABC transporter ATPase subunit (RefSeq) 0.26 Shew_3439 type II secretion system protein (RefSeq) low > 60
Shewanella sp. ANA-3 0.59 Shewana3_3096 spermidine/putrescine ABC transporter ATPase subunit (RefSeq) 0.24 Shewana3_0418 type II secretion system protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.59 SO1271 polyamine ABC transporter, ATP-binding protein (NCBI ptt file) 0.26 SO0415 type IV pilus biogenesis protein PilC (NCBI ptt file) low > 76
Marinobacter adhaerens HP15 0.58 HP15_939 spermidine/putrescine ABC transporter ATPase subunit 0.26 HP15_2410 type IV pilus biogenesis protein PilC low > 73
Pseudomonas stutzeri RCH2 0.58 Psest_4282 spermidine/putrescine ABC transporter ATP-binding subunit 0.27 Psest_3287 Type II secretory pathway, component PulF low > 67
Pseudomonas sp. S08-1 0.58 OH686_11455 Putrescine transport ATP-binding protein PotG 0.27 OH686_16500 Type IV fimbrial assembly protein PilC low > 80
Xanthomonas campestris pv. campestris strain 8004 0.57 Xcc-8004.2210.1 Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2) 0.27 Xcc-8004.1346.1 Type IV fimbrial assembly protein PilC low > 74
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_4352 Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2) 0.29 Pf1N1B4_2841 Type IV fimbrial assembly protein PilC low > 87
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_29310 transporter 0.27 AO353_14325 type II secretion system protein F low > 101
Pseudomonas fluorescens SBW25 0.56 PFLU_RS28765 polyamine ABC transporter ATP-binding protein 0.25 PFLU_RS03945 type II secretion system F family protein low > 109
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_930 Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2) 0.28 PfGW456L13_1509 Type IV fimbrial assembly protein PilC low > 87
Pseudomonas fluorescens SBW25-INTG 0.56 PFLU_RS28765 polyamine ABC transporter ATP-binding protein 0.25 PFLU_RS03945 type II secretion system F family protein low > 109
Rhodospirillum rubrum S1H 0.56 Rru_A1017 Spermidine/putrescine ABC transporter ATP-binding subunit (NCBI) 0.14 Rru_A0114 type II secretion system protein (NCBI) — —
Pseudomonas sp. RS175 0.55 PFR28_04293 Spermidine/putrescine import ATP-binding protein PotA 0.25 PFR28_03732 Type II secretion system protein F low > 88
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_13165 transporter 0.26 AO356_16010 type II secretion system protein F low > 104
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_4515 Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2) 0.25 Pf6N2E2_5141 Type IV fimbrial assembly protein PilC low > 103
Pseudomonas syringae pv. syringae B728a 0.53 Psyr_4863 Spermidine/putrescine ABC transporter ATP-binding subunit 0.28 Psyr_0797 type II secretion system protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.53 Psyr_4863 Spermidine/putrescine ABC transporter ATP-binding subunit 0.28 Psyr_0797 type II secretion system protein low > 86

Not shown: 22 genomes with orthologs for HER17_RS12495 only; 9 genomes with orthologs for HER17_RS03235 only