Conservation of cofitness between HER17_RS12330 and HER17_RS00815 in Pectobacterium carotovorum WPP14

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12330 LysR family transcriptional regulator 1.0 HER17_RS00815 ferredoxin--NADP(+) reductase 0.96 1
Dickeya dianthicola ME23 0.73 DZA65_RS09965 LysR family transcriptional regulator 0.83 DZA65_RS21540 ferredoxin--NADP(+) reductase low > 75
Dickeya dadantii 3937 0.72 DDA3937_RS09645 LysR family transcriptional regulator 0.83 DDA3937_RS00880 ferredoxin--NADP(+) reductase — —
Dickeya dianthicola 67-19 0.72 HGI48_RS09655 LysR family transcriptional regulator 0.83 HGI48_RS20495 ferredoxin--NADP(+) reductase low > 71
Pseudomonas putida KT2440 0.23 PP_4522 Transcriptional regulator, LysR family 0.36 PP_4646 ferredoxin--NADP(+) reductase — —
Pseudomonas sp. RS175 0.23 PFR28_00779 hypothetical protein 0.37 PFR28_03796 Flavodoxin/ferredoxin--NADP reductase low > 88
Pseudomonas fluorescens SBW25-INTG 0.23 PFLU_RS22115 LysR family transcriptional regulator 0.38 PFLU_RS26250 ferredoxin--NADP reductase low > 109
Pseudomonas fluorescens SBW25 0.23 PFLU_RS22115 LysR family transcriptional regulator 0.38 PFLU_RS26250 ferredoxin--NADP reductase low > 109
Pseudomonas simiae WCS417 0.23 PS417_20175 LysR family transcriptional regulator 0.38 PS417_24325 ferredoxin-NADP reductase — —
Pseudomonas fluorescens FW300-N1B4 0.23 Pf1N1B4_524 Transcriptional regulator GbuR 0.37 Pf1N1B4_2764 Ferredoxin--NADP(+) reductase (EC 1.18.1.2) low > 87
Pseudomonas fluorescens FW300-N2E2 0.23 Pf6N2E2_2654 Transcriptional regulator GbuR 0.38 Pf6N2E2_5072 Ferredoxin--NADP(+) reductase (EC 1.18.1.2) low > 103
Pseudomonas fluorescens FW300-N2C3 0.23 AO356_04090 LysR family transcriptional regulator 0.39 AO356_15660 ferredoxin-NADP reductase low > 104
Pseudomonas fluorescens GW456-L13 0.23 PfGW456L13_4434 Transcriptional regulator GbuR 0.38 PfGW456L13_1440 Ferredoxin--NADP(+) reductase (EC 1.18.1.2) low > 87
Azospirillum sp. SherDot2 0.23 MPMX19_03701 hypothetical protein 0.26 MPMX19_05828 Ferredoxin--NADP reductase — —
Azospirillum brasilense Sp245 0.22 AZOBR_RS30800 transcriptional regulator 0.26 AZOBR_RS02415 ferredoxin--NADP reductase — —
Pseudomonas fluorescens FW300-N2E3 0.22 AO353_18405 LysR family transcriptional regulator 0.38 AO353_13960 ferredoxin-NADP reductase low > 101
Pseudomonas sp. S08-1 0.22 OH686_11350 Transcriptional regulator GbuR 0.37 OH686_16145 Ferredoxin--NADP(+) reductase or Flavodoxin--NADP(+) reductase low > 80
Burkholderia phytofirmans PsJN 0.21 BPHYT_RS05085 LysR family transcriptional regulator 0.27 BPHYT_RS01800 ferredoxin--NADP reductase — —
Klebsiella michiganensis M5al 0.21 BWI76_RS21930 LysR family transcriptional regulator 0.79 BWI76_RS27450 ferredoxin--NADP(+) reductase low > 92
Shewanella amazonensis SB2B 0.20 Sama_1630 LysR family transcriptional regulator (RefSeq) 0.41 Sama_0663 ferredoxin--NADP reductase (RefSeq) low > 62
Pseudomonas syringae pv. syringae B728a 0.20 Psyr_0677 transcriptional regulator, LysR family 0.38 Psyr_4277 Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.20 Psyr_0677 transcriptional regulator, LysR family 0.38 Psyr_4277 Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region low > 86
Paraburkholderia graminis OAS925 0.20 ABIE53_001288 DNA-binding transcriptional LysR family regulator 0.27 ABIE53_000451 ferredoxin--NADP+ reductase — —
Paraburkholderia bryophila 376MFSha3.1 0.20 H281DRAFT_00177 transcriptional regulator, LysR family 0.27 H281DRAFT_02177 ferredoxin--NADP+ reductase — —
Paraburkholderia sabiae LMG 24235 0.20 QEN71_RS03395 LysR family transcriptional regulator 0.26 QEN71_RS00515 ferredoxin--NADP reductase — —
Acinetobacter radioresistens SK82 0.20 MPMX26_01249 HTH-type transcriptional regulator HdfR 0.34 MPMX26_02540 Flavodoxin/ferredoxin--NADP reductase — —
Rahnella sp. WP5 0.19 EX31_RS06810 LysR family transcriptional regulator 0.78 EX31_RS14285 ferredoxin--NADP(+) reductase low > 89
Serratia liquefaciens MT49 0.19 IAI46_08230 LysR family transcriptional regulator 0.82 IAI46_24620 ferredoxin--NADP(+) reductase low > 86
Acidovorax sp. GW101-3H11 0.19 Ac3H11_4344 Regulatory protein, LysR:LysR, substrate-binding 0.25 Ac3H11_3439 Ferredoxin--NADP(+) reductase (EC 1.18.1.2) — —
Variovorax sp. OAS795 0.19 ABID97_RS09325 LysR family transcriptional regulator 0.23 ABID97_RS03500 ferredoxin--NADP reductase — —
Cupriavidus basilensis FW507-4G11 0.18 RR42_RS02460 LysR family transcriptional regulator 0.29 RR42_RS26685 ferredoxin-NADP reductase low > 128
Variovorax sp. SCN45 0.18 GFF6151 Transcriptional regulator, LysR family 0.23 GFF6387 Ferredoxin--NADP(+) reductase (EC 1.18.1.2) @ Flavodoxin--NADP(+) reductase (EC 1.19.1.1) — —
Ralstonia sp. UNC404CL21Col 0.18 ABZR87_RS16045 LysR family transcriptional regulator 0.25 ABZR87_RS11335 ferredoxin--NADP reductase — —
Herbaspirillum seropedicae SmR1 0.16 HSERO_RS08550 LysR family transcriptional regulator 0.34 HSERO_RS07730 ferredoxin-NADP reductase low > 78
Ralstonia solanacearum GMI1000 0.15 RS_RS24690 LysR family transcriptional regulator 0.25 RS_RS06545 ferredoxin--NADP reductase — —
Alteromonas macleodii MIT1002 0.15 MIT1002_01262 DNA-binding transcriptional activator XapR 0.27 MIT1002_02652 Ferredoxin--NADP reductase low > 70
Shewanella loihica PV-4 0.14 Shew_3174 LysR family transcriptional regulator (RefSeq) 0.41 Shew_0858 oxidoreductase FAD/NAD(P)-binding subunit (RefSeq) low > 60
Ralstonia solanacearum PSI07 0.14 RPSI07_RS07380 LysR family transcriptional regulator 0.25 RPSI07_RS17600 ferredoxin--NADP reductase — —

Not shown: 0 genomes with orthologs for HER17_RS12330 only; 46 genomes with orthologs for HER17_RS00815 only