Conservation of cofitness between GFF122 and GFF883 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF122 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 1.0 GFF883 Predicted transcriptional regulator of the myo-inositol catabolic operon 0.85 12
Enterobacter asburiae PDN3 0.97 EX28DRAFT_3710 pyruvate dehydrogenase E1 component, homodimeric type 0.61 EX28DRAFT_0146 transcriptional regulator, RpiR family low > 76
Klebsiella michiganensis M5al 0.96 BWI76_RS04880 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.80 BWI76_RS03080 (Fe-S)-cluster assembly protein
Enterobacter sp. TBS_079 0.96 MPMX20_00807 Pyruvate dehydrogenase E1 component 0.61 MPMX20_03376 HTH-type transcriptional regulator MurR low > 85
Pectobacterium carotovorum WPP14 0.93 HER17_RS03290 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.62 HER17_RS14445 MurR/RpiR family transcriptional regulator
Erwinia tracheiphila SCR3 0.92 LU632_RS03080 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.79 LU632_RS02360 MurR/RpiR family transcriptional regulator
Dickeya dianthicola 67-19 0.92 HGI48_RS17850 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.63 HGI48_RS03725 SIS domain-containing protein
Dickeya dadantii 3937 0.92 DDA3937_RS17925 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.63 DDA3937_RS03665 MurR/RpiR family transcriptional regulator
Dickeya dianthicola ME23 0.92 DZA65_RS19000 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.62 DZA65_RS03850 MurR/RpiR family transcriptional regulator
Pantoea sp. MT58 0.92 IAI47_15810 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.83 IAI47_01475 MurR/RpiR family transcriptional regulator low > 76
Serratia liquefaciens MT49 0.91 IAI46_21325 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.82 IAI46_24010 MurR/RpiR family transcriptional regulator low > 86
Pseudomonas fluorescens FW300-N1B4 0.60 Pf1N1B4_1476 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.32 Pf1N1B4_4273 Predicted transcriptional regulator of the myo-inositol catabolic operon
Pseudomonas syringae pv. syringae B728a ΔmexB 0.60 Psyr_0518 2-oxo-acid dehydrogenase E1 component homodimeric type 0.32 Psyr_3275 Helix-turn-helix protein RpiR:Sugar isomerase (SIS)
Cupriavidus basilensis FW507-4G11 0.60 RR42_RS07365 pyruvate dehydrogenase 0.19 RR42_RS26840 DNA-binding protein low > 128
Pseudomonas syringae pv. syringae B728a 0.60 Psyr_0518 2-oxo-acid dehydrogenase E1 component homodimeric type 0.32 Psyr_3275 Helix-turn-helix protein RpiR:Sugar isomerase (SIS)
Ralstonia sp. UNC404CL21Col 0.60 ABZR87_RS13470 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.18 ABZR87_RS04920 MurR/RpiR family transcriptional regulator
Ralstonia solanacearum PSI07 0.60 RPSI07_RS15815 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.32 RPSI07_RS17960 MurR/RpiR family transcriptional regulator
Pseudomonas sp. RS175 0.60 PFR28_05061 Pyruvate dehydrogenase E1 component 0.32 PFR28_02426 HTH-type transcriptional regulator MurR
Pseudomonas fluorescens FW300-N2C3 0.60 AO356_08960 pyruvate dehydrogenase 0.32 AO356_23155 RpiR family transcriptional regulator
Pseudomonas fluorescens FW300-N2E2 0.60 Pf6N2E2_3674 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.32 Pf6N2E2_510 Predicted transcriptional regulator of the myo-inositol catabolic operon
Ralstonia solanacearum GMI1000 0.60 RS_RS08055 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.31 RS_RS06260 MurR/RpiR family transcriptional regulator
Pseudomonas fluorescens SBW25 0.60 PFLU_RS02275 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.32 PFLU_RS12580 MurR/RpiR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.60 PFLU_RS02275 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.32 PFLU_RS12580 MurR/RpiR family transcriptional regulator low > 109
Pseudomonas simiae WCS417 0.60 PS417_02220 pyruvate dehydrogenase 0.32 PS417_11845 RpiR family transcriptional regulator
Ralstonia solanacearum IBSBF1503 0.59 RALBFv3_RS01670 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.32 RALBFv3_RS15395 MurR/RpiR family transcriptional regulator
Ralstonia solanacearum UW163 0.59 UW163_RS14980 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.32 UW163_RS12855 MurR/RpiR family transcriptional regulator
Pseudomonas fluorescens FW300-N2E3 0.59 AO353_12865 pyruvate dehydrogenase 0.32 AO353_21330 RpiR family transcriptional regulator
Herbaspirillum seropedicae SmR1 0.59 HSERO_RS07305 pyruvate dehydrogenase 0.36 HSERO_RS12105 RpiR family transcriptional regulator
Paraburkholderia bryophila 376MFSha3.1 0.58 H281DRAFT_00466 pyruvate dehydrogenase E1 component 0.35 H281DRAFT_04463 transcriptional regulator, RpiR family
Paraburkholderia graminis OAS925 0.58 ABIE53_002793 pyruvate dehydrogenase E1 component 0.35 ABIE53_002944 DNA-binding MurR/RpiR family transcriptional regulator
Burkholderia phytofirmans PsJN 0.58 BPHYT_RS12840 pyruvate dehydrogenase 0.35 BPHYT_RS13890 RpiR family transcriptional regulator low > 109
Castellaniella sp019104865 MT123 0.57 ABCV34_RS04160 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.18 ABCV34_RS13380 MurR/RpiR family transcriptional regulator
Paraburkholderia sabiae LMG 24235 0.57 QEN71_RS05725 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.34 QEN71_RS05080 MurR/RpiR family transcriptional regulator
Bosea sp. OAE506 0.07 ABIE41_RS08425 transketolase 0.14 ABIE41_RS16720 MurR/RpiR family transcriptional regulator low > 77
Caulobacter crescentus NA1000 0.07 CCNA_01263 pyruvate dehydrogenase E1 component 0.38 CCNA_01355 transcriptional regulator IolR low > 66
Caulobacter crescentus NA1000 Δfur 0.07 CCNA_01263 pyruvate dehydrogenase E1 component 0.38 CCNA_01355 transcriptional regulator IolR low > 67

Not shown: 41 genomes with orthologs for GFF122 only; 3 genomes with orthologs for GFF883 only