Conservation of cofitness between PS417_06775 and PS417_03990 in Pseudomonas simiae WCS417

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_06775 antibiotic transporter 1.0 PS417_03990 ligand-gated channel protein 0.60 2
Pseudomonas fluorescens FW300-N1B4 0.79 Pf1N1B4_3247 Multidrug efflux RND membrane fusion protein MexC 0.49 Pf1N1B4_1141 Ferrichrome-iron receptor — —
Pseudomonas sp. RS175 0.78 PFR28_00632 putative efflux pump periplasmic linker TtgA 0.65 PFR28_00110 putative TonB-dependent receptor BfrD low > 88
Pseudomonas fluorescens FW300-N2E3 0.77 AO353_17300 antibiotic transporter 0.64 AO353_05460 ligand-gated channel protein low > 101
Pseudomonas fluorescens GW456-L13 0.75 PfGW456L13_4580 Multidrug efflux RND membrane fusion protein MexC 0.63 PfGW456L13_5070 Ferrichrome-iron receptor low > 87
Pseudomonas putida KT2440 0.74 PP_1386 Probable efflux pump periplasmic linker TtgA 0.63 PP_0861 outer membrane ferric siderophore receptor low > 96
Pseudomonas stutzeri RCH2 0.63 Psest_0309 RND family efflux transporter, MFP subunit 0.48 Psest_3347 TonB-dependent siderophore receptor low > 67
Escherichia coli ECRC101 0.51 MCAODC_27425 acrA multidrug efflux RND transporter periplasmic adaptor subunit AcrA 0.24 MCAODC_25455 fiu catecholate siderophore receptor Fiu — —
Escherichia coli ECRC101 0.51 OKFHMN_08200 acrA multidrug efflux RND transporter periplasmic adaptor subunit AcrA 0.24 OKFHMN_06240 fiu catecholate siderophore receptor Fiu — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.51 OHPLBJKB_03211 Multidrug efflux pump subunit AcrA 0.24 OHPLBJKB_02908 Catecholate siderophore receptor Fiu low > 73
Escherichia coli BW25113 0.51 b0463 acrA multidrug efflux system (NCBI) 0.24 b0805 fiu predicted iron outer membrane transporter (NCBI) low > 76
Escherichia coli ECOR27 0.51 NOLOHH_01135 acrA multidrug efflux RND transporter periplasmic adaptor subunit AcrA 0.24 NOLOHH_22590 fiu catecholate siderophore receptor Fiu 0.68 52
Escherichia coli ECRC99 0.51 KEDOAH_19765 acrA multidrug efflux RND transporter periplasmic adaptor subunit AcrA 0.24 KEDOAH_21670 fiu catecholate siderophore receptor Fiu — —
Escherichia coli BL21 0.51 ECD_00414 multidrug efflux system 0.24 ECD_00772 catecholate siderophore receptor low > 60
Escherichia coli ECRC102 0.51 NIAGMN_06255 acrA multidrug efflux RND transporter periplasmic adaptor subunit AcrA 0.24 NIAGMN_04285 fiu catecholate siderophore receptor Fiu — —
Escherichia coli ECRC62 0.51 BNILDI_22550 acrA multidrug efflux RND transporter periplasmic adaptor subunit AcrA 0.24 BNILDI_20870 fiu catecholate siderophore receptor Fiu — —
Escherichia coli ECRC98 0.51 JDDGAC_11850 acrA multidrug efflux RND transporter periplasmic adaptor subunit AcrA 0.24 JDDGAC_09875 fiu catecholate siderophore receptor Fiu — —
Escherichia fergusonii Becca 0.50 EFB2_03595 Multidrug efflux pump subunit AcrA 0.24 EFB2_03300 Catecholate siderophore receptor Fiu low > 86
Escherichia coli ECOR38 0.50 HEPCGN_06815 acrA multidrug efflux RND transporter periplasmic adaptor subunit AcrA 0.24 HEPCGN_01800 fiu catecholate siderophore receptor Fiu low > 85
Escherichia coli Nissle 1917 0.50 ECOLIN_RS02755 multidrug efflux RND transporter periplasmic adaptor subunit AcrA 0.24 ECOLIN_RS04285 catecholate siderophore receptor Fiu — —
Paraburkholderia sabiae LMG 24235 0.50 QEN71_RS29870 efflux RND transporter periplasmic adaptor subunit 0.21 QEN71_RS10175 TonB-dependent siderophore receptor low > 153
Klebsiella michiganensis M5al 0.49 BWI76_RS06780 MexE family multidrug efflux RND transporter periplasmic adaptor subunit 0.24 BWI76_RS08945 catecholate siderophore receptor Fiu low > 92
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS32415 hemolysin D 0.44 RR42_RS36040 TonB-dependent receptor low > 128
Burkholderia phytofirmans PsJN 0.47 BPHYT_RS16175 hemolysin D 0.21 BPHYT_RS35155 TonB-denpendent receptor low > 109
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.1793.1 RND efflux system, membrane fusion protein CmeA 0.24 Xcc-8004.1694.1 Ferrichrome-iron receptor low > 74
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_04171 membrane fusion protein, multidrug efflux system 0.21 H281DRAFT_02286 catecholate siderophore receptor low > 103
Dyella japonica UNC79MFTsu3.2 0.46 ABZR86_RS18280 efflux RND transporter periplasmic adaptor subunit 0.26 ABZR86_RS09175 catecholate siderophore receptor Fiu low > 74
Paraburkholderia graminis OAS925 0.46 ABIE53_003409 membrane fusion protein (multidrug efflux system) 0.21 ABIE53_000376 catecholate siderophore receptor low > 113
Azospirillum sp. SherDot2 0.45 MPMX19_05883 Multidrug resistance protein MexA 0.18 MPMX19_02863 putative TonB-dependent receptor BfrD low > 112
Azospirillum brasilense Sp245 0.43 AZOBR_RS30180 hemolysin D 0.18 AZOBR_RS19070 hydrogenase low > 97
Sphingomonas koreensis DSMZ 15582 0.43 Ga0059261_0560 RND family efflux transporter, MFP subunit 0.21 Ga0059261_1258 TonB-dependent siderophore receptor low > 68
Shewanella oneidensis MR-1 0.42 SO4693 multidrug resistance protein, AcrA/AcrE family (NCBI ptt file) 0.39 SO3914 TonB-dependent receptor, putative (NCBI ptt file) low > 76
Variovorax sp. SCN45 0.41 GFF2442 RND efflux system, membrane fusion protein 0.43 GFF5863 Ferrichrome-iron receptor low > 127
Rhodopseudomonas palustris CGA009 0.40 TX73_012250 efflux RND transporter periplasmic adaptor subunit 0.23 TX73_018010 TonB-dependent receptor low > 86
Acinetobacter radioresistens SK82 0.39 MPMX26_00690 Multidrug efflux pump subunit AcrA 0.42 MPMX26_00406 putative TonB-dependent receptor BfrD low > 36
Caulobacter crescentus NA1000 Δfur 0.38 CCNA_00851 periplasmic multidrug efflux lipoprotein precursor 0.34 CCNA_00028 TonB-dependent receptor low > 67
Caulobacter crescentus NA1000 0.38 CCNA_00851 periplasmic multidrug efflux lipoprotein precursor 0.34 CCNA_00028 TonB-dependent receptor low > 66
Rhodanobacter sp. FW510-T8 0.34 OKGIIK_09165 acrA efflux transporter periplasmic adaptor subunit 0.20 OKGIIK_11115 fiu Outer membrane receptor for monomeric catechols low > 52
Alteromonas macleodii MIT1002 0.34 MIT1002_00134 Acriflavine resistance protein A precursor 0.20 MIT1002_03725 TonB-dependent receptor Fiu low > 70
Rhodanobacter denitrificans FW104-10B01 0.33 LRK54_RS02095 efflux RND transporter periplasmic adaptor subunit 0.19 LRK54_RS04240 TonB-dependent siderophore receptor low > 59
Rhodanobacter denitrificans MT42 0.33 LRK55_RS01870 efflux RND transporter periplasmic adaptor subunit 0.20 LRK55_RS04010 TonB-dependent siderophore receptor low > 63
Lysobacter sp. OAE881 0.28 ABIE51_RS17985 efflux RND transporter periplasmic adaptor subunit 0.23 ABIE51_RS15760 TonB-dependent receptor — —

Not shown: 36 genomes with orthologs for PS417_06775 only; 7 genomes with orthologs for PS417_03990 only