| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas simiae WCS417 | 1.0 | PS417_23625 | | LysR family transcriptional regulator | 1.0 | PS417_00335 | | cytochrome B561 | 0.17 | 8 |
| Pseudomonas fluorescens SBW25 | 0.95 | PFLU_RS25440 | | LysR family transcriptional regulator | 0.99 | PFLU_RS00325 | | heme A synthase | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.95 | PFLU_RS25440 | | LysR family transcriptional regulator | 0.99 | PFLU_RS00325 | | heme A synthase | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.85 | AO353_05905 | | LysR family transcriptional regulator | 0.77 | AO353_10865 | | cytochrome B | low | > 101 |
| Pseudomonas fluorescens FW300-N2E2 | 0.83 | Pf6N2E2_3445 | | Transcriptional regulator, LysR family | 0.76 | Pf6N2E2_4105 | | Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.83 | AO356_07805 | | LysR family transcriptional regulator | 0.76 | AO356_11195 | | cytochrome B | low | > 104 |
| Pseudomonas fluorescens FW300-N1B4 | 0.82 | Pf1N1B4_1207 | | Transcriptional regulator, LysR family | 0.78 | Pf1N1B4_1861 | | Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA | low | > 87 |
| Pseudomonas fluorescens GW456-L13 | 0.81 | PfGW456L13_5137 | | Transcriptional regulator, LysR family | 0.77 | PfGW456L13_607 | | Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA | low | > 87 |
| Pseudomonas sp. RS175 | 0.81 | PFR28_00026 | | HTH-type transcriptional regulator DmlR | 0.73 | PFR28_04684 | | Heme A synthase | low | > 88 |
| Pseudomonas putida KT2440 | 0.76 | PP_4660 | | Transcriptional regulator, LysR family | 0.59 | PP_0109 | | conserved membrane protein of unknown function | low | > 96 |
| Herbaspirillum seropedicae SmR1 | 0.58 | HSERO_RS14735 | | LysR family transcripitonal regulator | 0.29 | HSERO_RS20750 | | cytochrome C oxidase subunit I | low | > 78 |
| Ralstonia solanacearum GMI1000 | 0.57 | RS_RS05740 | | LysR family transcriptional regulator | 0.31 | RS_RS01825 | | heme A synthase | low | > 80 |
| Ralstonia sp. UNC404CL21Col | 0.57 | ABZR87_RS10585 | | LysR family transcriptional regulator | 0.31 | ABZR87_RS06840 | | COX15/CtaA family protein | low | > 80 |
| Ralstonia solanacearum UW163 | 0.57 | UW163_RS12395 | | LysR family transcriptional regulator | 0.31 | UW163_RS02595 | | heme A synthase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.57 | RALBFv3_RS14925 | | LysR family transcriptional regulator | 0.31 | RALBFv3_RS10985 | | heme A synthase | low | > 76 |
| Cupriavidus basilensis FW507-4G11 | 0.55 | RR42_RS11395 | | LysR family transcriptional regulator | 0.29 | RR42_RS01915 | | cytochrome C oxidase subunit I | low | > 128 |
| Paraburkholderia graminis OAS925 | 0.55 | ABIE53_001728 | | DNA-binding transcriptional LysR family regulator | 0.29 | ABIE53_000682 | | cytochrome c oxidase assembly protein subunit 15 | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.54 | H281DRAFT_04874 | | transcriptional regulator, LysR family | 0.29 | H281DRAFT_01986 | | cytochrome c oxidase assembly protein subunit 15 | — | — |
| Burkholderia phytofirmans PsJN | 0.54 | BPHYT_RS07550 | | LysR family transcriptional regulator | 0.29 | BPHYT_RS02685 | | cytochrome C oxidase subunit I | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.54 | ABZR86_RS17240 | | LysR family transcriptional regulator | 0.33 | ABZR86_RS12900 | | heme A synthase | low | > 74 |
| Pseudomonas sp. S08-1 | 0.53 | OH686_12450 | | Transcriptional regulator, LysR family | 0.50 | OH686_12290 | | Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA | low | > 80 |
| Variovorax sp. SCN45 | 0.53 | GFF2787 | | Transcriptional regulator PA1859, LysR family | 0.26 | GFF2306 | | Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA | low | > 127 |
| Acidovorax sp. GW101-3H11 | 0.53 | Ac3H11_1990 | | Transcriptional regulator, LysR family | 0.31 | Ac3H11_3884 | | Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA | low | > 79 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.52 | GFF2875 | | Transcriptional regulator, LysR family | 0.29 | GFF697 | | Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA | low | > 90 |
| Pseudomonas stutzeri RCH2 | 0.52 | Psest_0042 | | Transcriptional regulator | 0.47 | Psest_4333 | | Uncharacterized protein required for cytochrome oxidase assembly | — | — |
| Shewanella sp. ANA-3 | 0.49 | Shewana3_3598 | | LysR family transcriptional regulator (RefSeq) | 0.30 | Shewana3_3997 | | cytochrome oxidase assembly (RefSeq) | low | > 73 |
| Paraburkholderia sabiae LMG 24235 | 0.49 | QEN71_RS38935 | | LysR family transcriptional regulator | 0.30 | QEN71_RS01540 | | COX15/CtaA family protein | — | — |
| Shewanella amazonensis SB2B | 0.47 | Sama_2389 | | LysR family transcriptional regulator (RefSeq) | 0.31 | Sama_3490 | | cytochrome oxidase assembly (RefSeq) | low | > 62 |
| Shewanella oneidensis MR-1 | 0.47 | SO2455 | | transcriptional regulator, LysR family (NCBI ptt file) | 0.35 | SO4613 | | cytochrome oxidase assembly protein, putative (NCBI ptt file) | low | > 76 |
| Alteromonas macleodii MIT1002 | 0.44 | MIT1002_01180 | | D-malate degradation protein R | 0.37 | MIT1002_04028 | | Cytochrome oxidase assembly protein | low | > 70 |
Not shown: 25 genomes with orthologs for PS417_23625 only; 10 genomes with orthologs for PS417_00335 only