Conservation of cofitness between GFF5041 and GFF5226 in Hydrogenophaga sp. GW460-11-11-14-LB1

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF5041 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) 1.0 GFF5226 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.54 12
Variovorax sp. SCN45 0.84 GFF1255 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) @ O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) 0.32 GFF4456 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) low > 127
Variovorax sp. OAS795 0.83 ABID97_RS15510 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.32 ABID97_RS06300 shikimate dehydrogenase — —
Acidovorax sp. GW101-3H11 0.81 Ac3H11_549 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) 0.38 Ac3H11_4044 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) low > 79
Xanthomonas campestris pv. campestris strain 8004 0.80 Xcc-8004.1385.1 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) 0.31 Xcc-8004.5020.1 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) low > 74
Dechlorosoma suillum PS 0.80 Dsui_2241 OAH/OAS sulfhydrylase 0.53 Dsui_0443 shikimate 5-dehydrogenase — —
Ralstonia sp. UNC404CL21Col 0.80 ABZR87_RS17575 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.53 ABZR87_RS18455 shikimate dehydrogenase low > 80
Herbaspirillum seropedicae SmR1 0.79 HSERO_RS18310 O-acetylhomoserine aminocarboxypropyltransferase 0.49 HSERO_RS01990 shikimate 5-dehydrogenase low > 78
Cupriavidus basilensis FW507-4G11 0.79 RR42_RS32610 O-acetylhomoserine aminocarboxypropyltransferase 0.40 RR42_RS17645 shikimate dehydrogenase low > 128
Pseudomonas putida KT2440 0.74 PP_2528 O-acetylhomoserine (thiol)-lyase 0.58 PP_3002 shikimate dehydrogenase-related enzyme low > 96
Castellaniella sp019104865 MT123 0.74 ABCV34_RS10165 bifunctional O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 0.49 ABCV34_RS11620 shikimate dehydrogenase low > 48
Pseudomonas sp. S08-1 0.74 OH686_09845 O-acetylhomoserine sulfhydrylase or O-succinylhomoserine sulfhydrylase 0.45 OH686_12485 Shikimate 5-dehydrogenase I alpha low > 80
Pseudomonas stutzeri RCH2 0.73 Psest_3685 OAH/OAS sulfhydrylase 0.41 Psest_0029 shikimate 5-dehydrogenase — —
Acinetobacter radioresistens SK82 0.73 MPMX26_02833 O-acetyl-L-homoserine sulfhydrylase 0.36 MPMX26_02748 Shikimate dehydrogenase (NADP(+)) low > 36
Marinobacter adhaerens HP15 0.67 HP15_641 homocysteine synthase 0.41 HP15_3750 shikimate dehydrogenase — —
Dickeya dianthicola 67-19 0.66 HGI48_RS15890 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 0.37 HGI48_RS19190 shikimate dehydrogenase — —
Dickeya dianthicola ME23 0.66 DZA65_RS16970 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 0.38 DZA65_RS20315 shikimate dehydrogenase — —
Pseudomonas fluorescens SBW25-INTG 0.65 PFLU_RS02250 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 0.42 PFLU_RS00120 shikimate dehydrogenase — —
Pseudomonas fluorescens SBW25 0.65 PFLU_RS02250 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 0.42 PFLU_RS00120 shikimate dehydrogenase — —
Shewanella sp. ANA-3 0.64 Shewana3_0930 O-acetylhomoserine/O-acetylserine sulfhydrylase (RefSeq) 0.40 Shewana3_0043 aroE shikimate 5-dehydrogenase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.64 SO1095 O-acetylhomoserine (thiol)-lyase, putative (NCBI ptt file) 0.39 SO0040 aroE shikimate 5-dehydrogenase (NCBI ptt file) low > 76
Pectobacterium carotovorum WPP14 0.64 HER17_RS17585 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.35 HER17_RS02250 shikimate dehydrogenase low > 75
Shewanella loihica PV-4 0.64 Shew_2710 O-acetylhomoserine/O-acetylserine sulfhydrylase (RefSeq) 0.39 Shew_3727 shikimate 5-dehydrogenase (RefSeq) low > 60
Phocaeicola vulgatus CL09T03C04 0.57 HMPREF1058_RS17635 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 0.13 HMPREF1058_RS16750 shikimate dehydrogenase low > 67
Phocaeicola dorei CL03T12C01 0.57 ABI39_RS13825 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 0.12 ABI39_RS12665 shikimate dehydrogenase low > 72
Rhodopseudomonas palustris CGA009 0.56 TX73_023845 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 0.24 TX73_022410 shikimate dehydrogenase — —
Bacteroides thetaiotaomicron VPI-5482 0.55 BT2387 O-acetylhomoserine (thiol)-lyase (NCBI ptt file) 0.14 BT4215 shikimate dehydrogenase (EC 1.1.1.25) (from data) — —
Rhizobium sp. OAE497 0.55 ABIE40_RS07005 O-acetylhomoserine aminocarboxypropyltransferase 0.21 ABIE40_RS19250 shikimate dehydrogenase — —
Agrobacterium fabrum C58 0.54 Atu1251 O-acetylhomoserine sulfhydrylase 0.23 Atu0003 shikimate 5-dehydrogenase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.53 CA264_02370 O-acetylhomoserine aminocarboxypropyltransferase 0.12 CA264_19075 shikimate dehydrogenase — —
Sinorhizobium meliloti 1021 0.53 SMc01809 O-acetylhomoserine aminocarboxypropyltransferase 0.23 SMc02791 shikimate 5-dehydrogenase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.51 Echvi_3411 OAH/OAS sulfhydrylase 0.14 Echvi_1145 Shikimate 5-dehydrogenase — —
Parabacteroides merdae CL09T00C40 0.51 HMPREF1078_RS07330 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 0.16 HMPREF1078_RS14200 shikimate dehydrogenase low > 61
Pedobacter sp. GW460-11-11-14-LB5 0.49 CA265_RS08180 O-acetylhomoserine aminocarboxypropyltransferase 0.12 CA265_RS19745 shikimate dehydrogenase (EC 1.1.1.25) (from data) — —
Serratia liquefaciens MT49 0.34 IAI46_03630 methionine gamma-lyase 0.38 IAI46_23240 shikimate dehydrogenase low > 86

Not shown: 6 genomes with orthologs for GFF5041 only; 60 genomes with orthologs for GFF5226 only