Conservation of cofitness between PS417_24625 and PS417_24440 in Pseudomonas simiae WCS417

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_24625 (dimethylallyl)adenosine tRNA methylthiotransferase 1.0 PS417_24440 TetR family transcriptional regulator 0.23 13
Pseudomonas fluorescens SBW25 0.99 PFLU_RS26555 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.97 PFLU_RS26365 TetR/AcrR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS26555 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.97 PFLU_RS26365 TetR/AcrR family transcriptional regulator low > 109
Pseudomonas fluorescens FW300-N2E3 0.98 AO353_06375 (dimethylallyl)adenosine tRNA methylthiotransferase 0.86 AO353_06180 TetR family transcriptional regulator low > 101
Pseudomonas fluorescens FW300-N2E2 0.98 Pf6N2E2_5018 tRNA-i(6)A37 methylthiotransferase 0.83 Pf6N2E2_5059 Transcriptional regulator, TetR family low > 103
Pseudomonas fluorescens FW300-N1B4 0.97 Pf1N1B4_2712 tRNA-i(6)A37 methylthiotransferase 0.84 Pf1N1B4_2748 Transcriptional regulator, TetR family low > 87
Pseudomonas fluorescens FW300-N2C3 0.97 AO356_15410 (dimethylallyl)adenosine tRNA methylthiotransferase 0.83 AO356_15585 TetR family transcriptional regulator low > 104
Pseudomonas fluorescens GW456-L13 0.97 PfGW456L13_1380 tRNA-i(6)A37 methylthiotransferase 0.85 PfGW456L13_1426 Transcriptional regulator, TetR family low > 87
Pseudomonas sp. RS175 0.97 PFR28_03848 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase 0.83 PFR28_03812 HTH-type transcriptional repressor NicS low > 88
Pseudomonas syringae pv. syringae B728a 0.95 Psyr_4345 tRNA-i(6)A37 thiotransferase enzyme MiaB 0.73 Psyr_2131 transcriptional regulator, TetR family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.95 Psyr_4345 tRNA-i(6)A37 thiotransferase enzyme MiaB 0.73 Psyr_2131 transcriptional regulator, TetR family low > 86
Escherichia fergusonii Becca 0.67 EFB2_03438 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase 0.28 EFB2_04323 HTH-type transcriptional repressor NicS low > 86
Escherichia coli ECOR38 0.67 HEPCGN_01005 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.28 HEPCGN_10290 acrR TetR/AcrR family transcriptional regulator low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_03051 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase 0.28 OHPLBJKB_03830 HTH-type transcriptional repressor NicS low > 73
Escherichia coli Nissle 1917 0.67 ECOLIN_RS03555 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.28 ECOLIN_RS24435 TetR/AcrR family transcriptional regulator — —
Pantoea sp. MT58 0.67 IAI47_13945 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.41 IAI47_07270 TetR family transcriptional regulator low > 76
Escherichia coli ECRC62 0.67 BNILDI_21610 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.28 BNILDI_07175 TetR/AcrR family transcriptional regulator — —
Klebsiella michiganensis M5al 0.66 BWI76_RS08135 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.37 BWI76_RS16950 TetR family transcriptional regulator — —
Serratia liquefaciens MT49 0.66 IAI46_06025 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.37 IAI46_12895 TetR family transcriptional regulator low > 86
Enterobacter asburiae PDN3 0.65 EX28DRAFT_2310 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB 0.36 EX28DRAFT_3565 transcriptional regulator, TetR family low > 76
Enterobacter sp. TBS_079 0.65 MPMX20_01311 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase 0.37 MPMX20_00655 HTH-type transcriptional repressor NicS low > 85
Paraburkholderia sabiae LMG 24235 0.64 QEN71_RS02195 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.50 QEN71_RS13120 TetR family transcriptional regulator low > 153
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS16535 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase 0.51 BPHYT_RS22695 TetR family transcriptional regulator low > 109
Castellaniella sp019104865 MT123 0.64 ABCV34_RS15345 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.46 ABCV34_RS11575 TetR/AcrR family transcriptional regulator low > 48
Rahnella sp. WP5 0.64 EX31_RS23205 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.34 EX31_RS06045 TetR family transcriptional regulator low > 89
Paraburkholderia bryophila 376MFSha3.1 0.63 H281DRAFT_04239 tRNA-i(6)A37 thiotransferase enzyme MiaB 0.51 H281DRAFT_03218 transcriptional regulator, TetR family low > 103
Ralstonia solanacearum GMI1000 0.63 RS_RS02645 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.50 RS_RS23855 TetR/AcrR family transcriptional regulator low > 80
Ralstonia solanacearum PSI07 0.63 RPSI07_RS21380 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.51 RPSI07_RS06190 TetR/AcrR family transcriptional regulator low > 81
Ralstonia solanacearum UW163 0.63 UW163_RS01760 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.50 UW163_RS21690 TetR/AcrR family transcriptional regulator — —
Ralstonia solanacearum IBSBF1503 0.63 RALBFv3_RS11825 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.50 RALBFv3_RS17460 TetR/AcrR family transcriptional regulator low > 76
Hydrogenophaga sp. GW460-11-11-14-LB1 0.60 GFF613 tRNA-i(6)A37 methylthiotransferase 0.44 GFF5228 Transcriptional regulator, TetR family low > 90
Acidovorax sp. GW101-3H11 0.60 Ac3H11_4008 tRNA-i(6)A37 methylthiotransferase 0.43 Ac3H11_1230 Transcriptional regulator, TetR family low > 79
Azospirillum sp. SherDot2 0.46 MPMX19_02511 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase 0.54 MPMX19_03530 HTH-type transcriptional repressor NicS low > 112
Azospirillum brasilense Sp245 0.44 AZOBR_RS01475 (dimethylallyl)adenosine tRNA methylthiotransferase 0.37 AZOBR_RS11765 TetR family transcriptional regulator low > 97
Sinorhizobium meliloti 1021 0.44 SMc01115 (dimethylallyl)adenosine tRNA methylthiotransferase 0.52 SM_b20033 transcriptional regulator low > 103
Agrobacterium fabrum C58 0.43 Atu0356 miaB protein 0.42 Atu4530 TetR family transcriptional regulator low > 89

Not shown: 66 genomes with orthologs for PS417_24625 only; 2 genomes with orthologs for PS417_24440 only