Conservation of cofitness between PS417_24765 and PS417_24100 in Pseudomonas simiae WCS417

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_24765 membrane protein 1.0 PS417_24100 transcriptional regulator PdhR 0.48 14
Pseudomonas fluorescens SBW25-INTG 0.97 PFLU_RS26700 LrgB family protein 0.98 PFLU_RS25940 FCD domain-containing protein low > 109
Pseudomonas fluorescens SBW25 0.97 PFLU_RS26700 LrgB family protein 0.98 PFLU_RS25940 FCD domain-containing protein low > 109
Pseudomonas fluorescens FW300-N2E3 0.92 AO353_06515 hypothetical protein 0.92 AO353_05695 transcriptional regulator PdhR low > 101
Pseudomonas fluorescens GW456-L13 0.91 PfGW456L13_1351 LrgA-associated membrane protein LrgB 0.93 PfGW456L13_5113 Lactate-responsive regulator LldR in Enterobacteria, GntR family low > 87
Pseudomonas fluorescens FW300-N1B4 0.91 Pf1N1B4_2683 LrgA-associated membrane protein LrgB 0.94 Pf1N1B4_1185 Lactate-responsive regulator LldR in Enterobacteria, GntR family low > 87
Pseudomonas putida KT2440 0.88 PP_4815 putative Membrane protein 0.87 PP_4734 DNA-binding transcriptional dual regulator, LldR-L-lactate low > 96
Pseudomonas sp. RS175 0.87 PFR28_03876 Inner membrane protein YohK 0.91 PFR28_00064 Pyruvate dehydrogenase complex repressor 0.43 5
Pseudomonas fluorescens FW300-N2C3 0.86 AO356_15270 hypothetical protein 0.92 AO356_07545 transcriptional regulator PdhR low > 104
Pseudomonas fluorescens FW300-N2E2 0.85 Pf6N2E2_4989 LrgA-associated membrane protein LrgB 0.91 Pf6N2E2_3379 Lactate-responsive regulator LldR in Enterobacteria, GntR family low > 103
Pseudomonas sp. S08-1 0.70 OH686_09360 LrgA-associated membrane protein LrgB 0.76 OH686_17020 Lactate-responsive regulator LldR in Enterobacteria, GntR family 0.59 20
Pseudomonas stutzeri RCH2 0.68 Psest_0505 Putative effector of murein hydrolase 0.79 Psest_0956 Transcriptional regulators low > 67
Azospirillum brasilense Sp245 0.36 AZOBR_RS12150 membrane protein 0.25 AZOBR_RS25130 GntR family transcriptional regulator low > 97
Marinobacter adhaerens HP15 0.36 HP15_2943 LrgB family protein 0.65 HP15_4087 transcriptional regulator, GntR family low > 73
Paraburkholderia bryophila 376MFSha3.1 0.35 H281DRAFT_02851 TIGR00659 family protein 0.31 H281DRAFT_02906 transcriptional regulator, GntR family — —
Paraburkholderia graminis OAS925 0.35 ABIE53_005942 putative murein hydrolase (TIGR00659 family) 0.30 ABIE53_005884 GntR family transcriptional repressor for pyruvate dehydrogenase complex low > 113
Magnetospirillum magneticum AMB-1 0.34 AMB_RS06665 LrgB family protein 0.39 AMB_RS01210 FCD domain-containing protein — —
Azospirillum sp. SherDot2 0.33 MPMX19_01820 Inner membrane protein YohK 0.32 MPMX19_06090 Pyruvate dehydrogenase complex repressor low > 112
Variovorax sp. OAS795 0.33 ABID97_RS17375 LrgB family protein 0.19 ABID97_RS05820 FadR/GntR family transcriptional regulator low > 91
Burkholderia phytofirmans PsJN 0.32 BPHYT_RS26565 membrane protein 0.31 BPHYT_RS26990 GntR family transcriptional regulator — —
Variovorax sp. SCN45 0.31 GFF436 LrgA-associated membrane protein LrgB 0.17 GFF173 Hexuronate utilization operon transcriptional repressor ExuR low > 127
Rhodospirillum rubrum S1H 0.31 Rru_A2427 LrgB-like protein (NCBI) 0.25 Rru_A1414 regulatory protein GntR (NCBI) low > 58
Cupriavidus basilensis FW507-4G11 0.31 RR42_RS17325 membrane protein 0.30 RR42_RS21300 GntR family transcriptional regulator low > 128
Dickeya dianthicola ME23 0.31 DZA65_RS08945 CidB/LrgB family autolysis modulator 0.41 DZA65_RS19005 pyruvate dehydrogenase complex transcriptional repressor PdhR low > 75
Dickeya dianthicola 67-19 0.31 HGI48_RS08655 CidB/LrgB family autolysis modulator 0.40 HGI48_RS17855 pyruvate dehydrogenase complex transcriptional repressor PdhR low > 71
Pectobacterium carotovorum WPP14 0.29 HER17_RS13480 CidB/LrgB family autolysis modulator 0.39 HER17_RS03285 pyruvate dehydrogenase complex transcriptional repressor PdhR low > 75
Dickeya dadantii 3937 0.29 DDA3937_RS08490 CidB/LrgB family autolysis modulator 0.41 DDA3937_RS17930 pyruvate dehydrogenase complex transcriptional repressor PdhR 0.35 71
Escherichia coli Nissle 1917 0.29 ECOLIN_RS12540 CidB/LrgB family autolysis modulator 0.42 ECOLIN_RS00635 pyruvate dehydrogenase complex transcriptional repressor PdhR low > 55
Dinoroseobacter shibae DFL-12 0.29 Dshi_0156 LrgB family protein (RefSeq) 0.35 Dshi_3026 GntR domain protein (RefSeq) low > 64
Escherichia coli ECOR38 0.28 HEPCGN_22840 yohK CidB/LrgB family autolysis modulator 0.42 HEPCGN_08490 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR low > 87
Escherichia coli BL21 0.28 ECD_02071 LrgB family inner membrane protein 0.42 ECD_00112 pyruvate dehydrogenase complex repressor; autorepressor low > 61
Escherichia coli ECRC100 0.28 OKFHMN_23575 yohK CidB/LrgB family autolysis modulator 0.42 OKFHMN_10510 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.28 OHPLBJKB_01569 Inner membrane protein YohK 0.42 OHPLBJKB_03548 Pyruvate dehydrogenase complex repressor low > 73
Escherichia coli ECRC98 0.28 JDDGAC_27530 yohK CidB/LrgB family autolysis modulator 0.42 JDDGAC_14105 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR low > 86
Escherichia coli ECRC102 0.28 NIAGMN_21340 yohK CidB/LrgB family autolysis modulator 0.42 NIAGMN_08360 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR — —
Escherichia fergusonii Becca 0.28 EFB2_01714 Inner membrane protein YohK 0.42 EFB2_03932 Pyruvate dehydrogenase complex repressor low > 86
Escherichia coli BW25113 0.28 b2142 yohK predicted inner membrane protein (NCBI) 0.42 b0113 pdhR transcriptional regulator of pyruvate dehydrogenase complex (NCBI) low > 76
Escherichia coli ECRC62 0.28 BNILDI_14065 yohK CidB/LrgB family autolysis modulator 0.42 BNILDI_08755 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR low > 75
Escherichia coli ECRC101 0.28 MCAODC_14625 yohK CidB/LrgB family autolysis modulator 0.42 MCAODC_01025 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR low > 87
Escherichia coli ECOR27 0.28 NOLOHH_15145 yohK CidB/LrgB family autolysis modulator 0.42 NOLOHH_02855 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR low > 75
Escherichia coli ECRC99 0.28 KEDOAH_04610 yohK CidB/LrgB family autolysis modulator 0.42 KEDOAH_17645 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR — —
Pantoea sp. MT58 0.28 IAI47_06765 CidB/LrgB family autolysis modulator 0.39 IAI47_15815 pyruvate dehydrogenase complex transcriptional repressor PdhR low > 76
Erwinia tracheiphila SCR3 0.28 LU632_RS08560 CidB/LrgB family autolysis modulator 0.40 LU632_RS03075 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR low > 74
Rahnella sp. WP5 0.28 EX31_RS11260 CidB/LrgB family autolysis modulator 0.40 EX31_RS03485 pyruvate dehydrogenase complex transcriptional repressor PdhR low > 89
Klebsiella michiganensis M5al 0.27 BWI76_RS19605 CidB/LrgB family autolysis modulator 0.42 BWI76_RS04875 transcriptional regulator PdhR low > 92
Enterobacter sp. TBS_079 0.27 MPMX20_03114 Inner membrane protein YohK 0.42 MPMX20_00806 Pyruvate dehydrogenase complex repressor low > 85
Bosea sp. OAE506 0.27 ABIE41_RS15710 LrgB family protein 0.15 ABIE41_RS23680 FCD domain-containing protein low > 77
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.26 GFF3796 LrgA-associated membrane protein LrgB 0.41 GFF123 Transcriptional repressor for pyruvate dehydrogenase complex low > 78
Enterobacter asburiae PDN3 0.26 EX28DRAFT_0413 TIGR00659 family protein 0.42 EX28DRAFT_3708 Transcriptional regulators low > 76
Serratia liquefaciens MT49 0.26 IAI46_07945 CidB/LrgB family autolysis modulator 0.40 IAI46_21330 pyruvate dehydrogenase complex transcriptional repressor PdhR low > 86
Acinetobacter radioresistens SK82 0.19 MPMX26_00599 Holin-like protein CidB 0.29 MPMX26_02258 Putative L-lactate dehydrogenase operon regulatory protein low > 36
Hydrogenophaga sp. GW460-11-11-14-LB1 0.18 GFF4840 LrgA-associated membrane protein LrgB 0.16 GFF5464 Transcriptional regulator, GntR family low > 90

Not shown: 17 genomes with orthologs for PS417_24765 only; 16 genomes with orthologs for PS417_24100 only