Conservation of cofitness between GFF4364 and GFF4249 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF4364 Putative HTH-type transcriptional regulator ybaO 1.0 GFF4249 Cu(I)-responsive transcriptional regulator 0.67 9
Serratia liquefaciens MT49 0.81 IAI46_05065 Lrp/AsnC family transcriptional regulator 0.51 IAI46_13405 Cu(I)-responsive transcriptional regulator low > 86
Pseudomonas putida KT2440 0.61 PP_4595 putative LRP-like transcriptional regulator 0.46 PP_0585 putative metal-sensitive transcriptional regulator, MerR family low > 96
Rhodopseudomonas palustris CGA009 0.59 TX73_000050 Lrp/AsnC family transcriptional regulator 0.32 TX73_016860 helix-turn-helix domain-containing protein low > 86
Ralstonia sp. UNC404CL21Col 0.57 ABZR87_RS13965 Lrp/AsnC family transcriptional regulator 0.44 ABZR87_RS04230 Cu(I)-responsive transcriptional regulator low > 80
Agrobacterium fabrum C58 0.57 Atu1885 transcriptional regulator, AsnC family 0.46 Atu1197 transcriptional regulator, MerR family
Bosea sp. OAE506 0.56 ABIE41_RS02640 Lrp/AsnC family transcriptional regulator 0.46 ABIE41_RS15580 Cu(I)-responsive transcriptional regulator low > 77
Sinorhizobium meliloti 1021 0.56 SMc00131 transcriptional regulator 0.48 SM_b21579 MerR family transcriptional regulator low > 103
Burkholderia phytofirmans PsJN 0.55 BPHYT_RS07955 transcriptional regulator 0.43 BPHYT_RS06865 MerR family transcriptional regulator
Paraburkholderia sabiae LMG 24235 0.55 QEN71_RS23210 Lrp/AsnC family transcriptional regulator 0.45 QEN71_RS23915 Cu(I)-responsive transcriptional regulator low > 153
Paraburkholderia bryophila 376MFSha3.1 0.55 H281DRAFT_05082 transcriptional regulator, AsnC family 0.44 H281DRAFT_04982 transcriptional regulator, MerR family low > 103
Pseudomonas syringae pv. syringae B728a 0.52 Psyr_0133 transcriptional regulator, AsnC family 0.46 Psyr_0653 transcriptional regulator, MerR family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.52 Psyr_0133 transcriptional regulator, AsnC family 0.46 Psyr_0653 transcriptional regulator, MerR family low > 86
Variovorax sp. SCN45 0.51 GFF4980 Transcriptional regulator, AsnC family 0.50 GFF3315 Cu(I)-responsive transcriptional regulator low > 127
Rhizobium sp. OAE497 0.51 ABIE40_RS10690 Lrp/AsnC family transcriptional regulator 0.40 ABIE40_RS20305 Cu(I)-responsive transcriptional regulator
Azospirillum brasilense Sp245 0.50 AZOBR_RS32440 ArsR family transcriptional regulator 0.48 AZOBR_RS19845 MerR family transcriptional regulator low > 97
Herbaspirillum seropedicae SmR1 0.50 HSERO_RS14145 ArsR family transcriptional regulator 0.52 HSERO_RS08015 MerR family transcriptional regulator low > 78
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_24405 ArsR family transcriptional regulator 0.48 AO353_06160 transcriptional regulator low > 101
Pseudomonas fluorescens FW300-N2E2 0.42 Pf6N2E2_4493 Transcriptional regulator, AsnC family 0.47 Pf6N2E2_3488 Cu(I)-responsive transcriptional regulator low > 103
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_910 Transcriptional regulator, AsnC family 0.48 PfGW456L13_25 Cu(I)-responsive transcriptional regulator low > 87
Pseudomonas sp. RS175 0.42 PFR28_04311 DNA-binding transcriptional activator DecR 0.47 PFR28_05243 HTH-type transcriptional regulator HmrR low > 88
Phaeobacter inhibens DSM 17395 0.42 PGA1_c25250 transcriptional regulator, AsnC family 0.44 PGA1_c02530 HTH-type transcriptional regulator low > 62
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS28870 Lrp/AsnC family transcriptional regulator 0.46 PFLU_RS03235 Cu(I)-responsive transcriptional regulator low > 109
Pseudomonas simiae WCS417 0.41 PS417_27210 AsnC family transcriptional regulator 0.47 PS417_03155 transcriptional regulator low > 88
Pseudomonas fluorescens FW300-N1B4 0.41 Pf1N1B4_2240 Transcriptional regulator, AsnC family 0.47 Pf1N1B4_1263 Cu(I)-responsive transcriptional regulator low > 87
Pseudomonas fluorescens SBW25 0.41 PFLU_RS28870 Lrp/AsnC family transcriptional regulator 0.46 PFLU_RS03235 Cu(I)-responsive transcriptional regulator low > 109
Pseudomonas fluorescens FW300-N2C3 0.41 AO356_13070 AsnC family transcriptional regulator 0.47 AO356_08070 transcriptional regulator low > 104
Marinobacter adhaerens HP15 0.41 HP15_860 transcriptional regulator, AsnC family protein 0.33 HP15_89 transcriptional regulator, MerR family protein low > 73
Pseudomonas stutzeri RCH2 0.39 Psest_3518 Transcriptional regulators 0.47 Psest_0737 Cu(I)-responsive transcriptional regulator low > 67
Ralstonia solanacearum PSI07 0.39 RPSI07_RS09580 Lrp/AsnC family transcriptional regulator 0.43 RPSI07_RS08315 Cu(I)-responsive transcriptional regulator low > 81
Ralstonia solanacearum UW163 0.39 UW163_RS05945 Lrp/AsnC family transcriptional regulator 0.44 UW163_RS04655 Cu(I)-responsive transcriptional regulator
Ralstonia solanacearum GMI1000 0.39 RS_RS15580 Lrp/AsnC family transcriptional regulator 0.44 RS_RS16770 Cu(I)-responsive transcriptional regulator low > 80
Ralstonia solanacearum IBSBF1503 0.39 RALBFv3_RS07680 Lrp/AsnC family transcriptional regulator 0.44 RALBFv3_RS08955 Cu(I)-responsive transcriptional regulator low > 76
Dyella japonica UNC79MFTsu3.2 0.38 ABZR86_RS15320 Lrp/AsnC family transcriptional regulator 0.33 ABZR86_RS01745 heavy metal-responsive transcriptional regulator low > 74

Not shown: 34 genomes with orthologs for GFF4364 only; 11 genomes with orthologs for GFF4249 only