Conservation of cofitness between GFF2762 and GFF39 in Sphingobium sp. HT1-2

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF2762 4-hydroxybenzoate transporter 1.0 GFF39 Replication-associated recombination protein RarA 0.63 10
Cupriavidus basilensis FW507-4G11 0.34 RR42_RS32565 MFS transporter 0.42 RR42_RS04355 recombination factor protein RarA low > 128
Pseudomonas putida KT2440 0.29 PP_3740 Major facilitator family transporter 0.45 PP_4002 DNA-dependent ATPase required for recombination low > 96
Pseudomonas sp. BP01 0.28 JOY50_RS05085 MFS transporter 0.46 JOY50_RS06525 replication-associated recombination protein A low > 84
Xanthomonas campestris pv. campestris strain 8004 0.27 Xcc-8004.459.1 4-hydroxybenzoate transporter 0.41 Xcc-8004.2744.1 FIG065221: Holliday junction DNA helicase low > 74
Acinetobacter baumannii LAC-4 0.27 RR41_RS09880 MFS transporter 0.37 RR41_RS00275 replication-associated recombination protein A low > 55
Paraburkholderia bryophila 376MFSha3.1 0.25 H281DRAFT_01371 MFS transporter, AAHS family, 4-hydroxybenzoate transporter 0.42 H281DRAFT_00180 Recombination protein MgsA — —
Paraburkholderia graminis OAS925 0.24 ABIE53_004022 AAHS family 4-hydroxybenzoate transporter-like MFS transporter 0.44 ABIE53_001292 putative ATPase low > 113
Erwinia amylovora T8 0.24 OLJFJH_13950 aromatic acid/H+ symport family MFS transporter 0.41 OLJFJH_16170 recombination factor protein RarA low > 58
Paraburkholderia sabiae LMG 24235 0.24 QEN71_RS14340 MFS transporter 0.43 QEN71_RS03415 replication-associated recombination protein A low > 153
Klebsiella michiganensis M5al 0.24 BWI76_RS06435 MFS transporter 0.42 BWI76_RS09670 recombination factor protein RarA low > 92
Pseudomonas fluorescens GW456-L13 0.23 PfGW456L13_4593 4-hydroxybenzoate transporter 0.45 PfGW456L13_2653 FIG065221: Holliday junction DNA helicase low > 87
Pseudomonas fluorescens FW300-N2E3 0.23 AO353_17190 4-hydroxybenzoate transporter 0.46 AO353_27640 recombination factor protein RarA low > 101
Pseudomonas simiae WCS417 0.23 PS417_06695 4-hydroxybenzoate transporter 0.45 PS417_16480 recombination factor protein RarA low > 88
Pseudomonas sp. DMC3 0.23 GFF2200 4-hydroxybenzoate transporter PcaK 0.45 GFF1532 Replication-associated recombination protein A low > 89
Burkholderia phytofirmans PsJN 0.23 BPHYT_RS30250 4-hydroxybenzoate transporter 0.43 BPHYT_RS05100 ATPase AAA low > 109
Pseudomonas sp. SVBP6 0.23 COO64_RS12265 MFS transporter 0.45 COO64_RS24170 replication-associated recombination protein A low > 93
Pseudomonas fluorescens SBW25-INTG 0.23 PFLU_RS06720 MFS transporter 0.45 PFLU_RS18520 replication-associated recombination protein A low > 109
Pseudomonas fluorescens SBW25 0.23 PFLU_RS06720 MFS transporter 0.45 PFLU_RS18520 replication-associated recombination protein A low > 109
Pseudomonas orientalis W4I3 0.23 QF045_RS09470 MFS transporter 0.45 QF045_RS18235 replication-associated recombination protein A low > 93
Pseudomonas fluorescens FW300-N1B4 0.23 Pf1N1B4_3231 4-hydroxybenzoate transporter 0.45 Pf1N1B4_4062 FIG065221: Holliday junction DNA helicase low > 87
Pseudomonas lactucae CFBP13502 0.23 GEMAOFIL_01499 4-hydroxybenzoate transporter PcaK 0.45 GEMAOFIL_03623 Replication-associated recombination protein A low > 96
Pantoea sp. MT58 0.23 IAI47_09595 aromatic acid/H+ symport family MFS transporter 0.41 IAI47_12900 replication-associated recombination protein A low > 76
Pseudomonas sp. RS175 0.23 PFR28_00619 4-hydroxybenzoate transporter PcaK 0.46 PFR28_02606 Replication-associated recombination protein A low > 88
Pseudomonas fluorescens FW300-N2C3 0.23 AO356_04945 4-hydroxybenzoate transporter 0.45 AO356_22185 recombination factor protein RarA low > 104
Pseudomonas fluorescens FW300-N2E2 0.22 Pf6N2E2_2838 4-hydroxybenzoate transporter 0.45 Pf6N2E2_299 FIG065221: Holliday junction DNA helicase low > 103
Pantoea agglomerans CFBP13505 P0401 0.22 PagCFBP13505_RS06560 aromatic acid/H+ symport family MFS transporter 0.41 PagCFBP13505_RS04430 replication-associated recombination protein A low > 74
Erwinia tracheiphila SCR3 0.22 LU632_RS11410 aromatic acid/H+ symport family MFS transporter 0.40 LU632_RS09755 replication-associated recombination protein A low > 73
Erwinia tracheiphila HP pepo 2.2 0.22 IJEDHG_23155 aromatic acid/H+ symport family MFS transporter 0.41 IJEDHG_20230 Replication-associated recombination protein A low > 61
Dickeya dianthicola 67-19 0.22 HGI48_RS12170 aromatic acid/H+ symport family MFS transporter 0.42 HGI48_RS09620 replication-associated recombination protein A low > 71
Pseudomonas aeruginosa PA14 0.22 IKLFDK_29035 MFS transporter 0.45 IKLFDK_13115 recombination factor protein RarA low > 98
Pseudomonas aeruginosa MRSN321 0.22 DY961_RS10295 MFS transporter 0.45 DY961_RS04155 replication-associated recombination protein A low > 100
Pseudomonas aeruginosa PUPa3 0.21 DQ20_RS51760 MFS transporter 0.45 DQ20_RS35180 replication-associated recombination protein A low > 101
Azospirillum brasilense Sp245 0.21 AZOBR_RS26920 4-hydroxybenzoate transporter 0.63 AZOBR_RS06885 ATPase AAA low > 97
Serratia liquefaciens MT49 0.21 IAI46_20990 aromatic acid/H+ symport family MFS transporter 0.41 IAI46_08570 replication-associated recombination protein A low > 87
Dickeya dianthicola ME23 0.21 DZA65_RS12620 aromatic acid/H+ symport family MFS transporter 0.42 DZA65_RS09930 replication-associated recombination protein A low > 75
Dickeya dadantii 3937 0.21 DDA3937_RS12080 aromatic acid/H+ symport family MFS transporter 0.42 DDA3937_RS09605 replication-associated recombination protein A low > 74
Variovorax sp. SCN45 0.20 GFF2258 4-hydroxybenzoate transporter 0.45 GFF6034 Replication-associated recombination protein RarA low > 127
Pseudomonas syringae pv. syringae B728a 0.19 Psyr_2124 Benzoate transport 0.45 Psyr_3177 Recombination protein MgsA low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.19 Psyr_2124 Benzoate transport 0.45 Psyr_3177 Recombination protein MgsA low > 86
Escherichia coli BW25113 0.16 b0353 mhpT putative transport protein (VIMSS) 0.41 b0892 ycaJ recombination protein (NCBI) low > 76
Escherichia coli BL21 0.16 ECD_00307 3-hydroxyphenylpropionic transporter 0.41 ECD_00896 recombination intermediate processing DNA-dependent ATPase low > 61
Escherichia coli ECOR27 0.16 NOLOHH_01670 mhpT 3-(3-hydroxy-phenyl)propionate transporter MhpT 0.41 NOLOHH_22130 rarA replication-associated recombination protein RarA low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.16 OHPLBJKB_03318 3-(3-hydroxy-phenyl)propionate transporter 0.41 OHPLBJKB_02776 Replication-associated recombination protein A low > 74
Caulobacter crescentus NA1000 Δfur 0.13 CCNA_02495 4-hydroxybenzoate transporter 0.60 CCNA_01342 ATPase, AAA family low > 67
Caulobacter crescentus NA1000 0.13 CCNA_02495 4-hydroxybenzoate transporter 0.60 CCNA_01342 ATPase, AAA family low > 66
Escherichia coli Nissle 1917 0.10 ECOLIN_RS09900 MFS transporter 0.41 ECOLIN_RS04745 replication-associated recombination protein RarA — —
Escherichia fergusonii Becca 0.10 EFB2_02219 Inner membrane metabolite transport protein YdjE 0.41 EFB2_03169 Replication-associated recombination protein A low > 86

Not shown: 1 genomes with orthologs for GFF2762 only; 71 genomes with orthologs for GFF39 only