| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Marinobacter adhaerens HP15 | 1.0 | HP15_527 | | pseudouridine synthase, RluA family | 1.0 | HP15_3572 | | aminotransferase, classes I and II | 0.42 | 18 |
| Pseudomonas fluorescens FW300-N2C3 | 0.60 | AO356_15925 | | ribosomal large subunit pseudouridine synthase D | 0.33 | AO356_26930 | | aminotransferase | low | > 104 |
| Pseudomonas fluorescens SBW25-INTG | 0.59 | PFLU_RS03870 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | 0.30 | PFLU_RS13630 | | putative C-S lyase | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.59 | PFLU_RS03870 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | 0.30 | PFLU_RS13630 | | putative C-S lyase | low | > 109 |
| Pseudomonas fluorescens FW300-N2E2 | 0.59 | Pf6N2E2_5127 | | Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) | 0.33 | Pf6N2E2_1210 | | putative aminotransferase | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.59 | PfGW456L13_1493 | | Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) | 0.32 | PfGW456L13_3090 | | putative aminotransferase | — | — |
| Pseudomonas sp. RS175 | 0.59 | PFR28_03748 | | Ribosomal large subunit pseudouridine synthase D | 0.32 | PFR28_02099 | | Cystathionine beta-lyase PatB | low | > 88 |
| Pseudomonas fluorescens FW300-N1B4 | 0.59 | Pf1N1B4_2822 | | Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) | 0.32 | Pf1N1B4_4946 | | putative aminotransferase | — | — |
| Pseudomonas simiae WCS417 | 0.59 | PS417_03820 | | ribosomal large subunit pseudouridine synthase D | 0.30 | PS417_12965 | | aminotransferase | — | — |
| Alteromonas macleodii MIT1002 | 0.58 | MIT1002_02679 | | Ribosomal large subunit pseudouridine synthase D | 0.28 | MIT1002_03179 | | Cystathionine beta-lyase PatB | 0.63 | 68 |
| Rahnella sp. WP5 | 0.54 | EX31_RS07570 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | 0.30 | EX31_RS06865 | | pyridoxal phosphate-dependent aminotransferase | low | > 89 |
| Serratia liquefaciens MT49 | 0.53 | IAI46_03985 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | 0.35 | IAI46_19310 | | pyridoxal phosphate-dependent aminotransferase | low | > 86 |
| Klebsiella michiganensis M5al | 0.53 | BWI76_RS21450 | | 23S rRNA pseudouridine(1911/1915/1917) synthase | 0.30 | BWI76_RS16300 | | bifunctional beta-cystathionase/maltose regulon regulatory protein | low | > 92 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.53 | GFF4182 | | Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) | 0.32 | GFF2547 | | Aspartate aminotransferase (EC 2.6.1.1) | low | > 78 |
| Escherichia coli Nissle 1917 | 0.53 | ECOLIN_RS14675 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | 0.30 | ECOLIN_RS09050 | | bifunctional maltose regulon transcriptional repressor/cystathionine beta-lyase MalY | low | > 52 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.53 | OHPLBJKB_01112 | | Ribosomal large subunit pseudouridine synthase D | 0.30 | OHPLBJKB_02104 | | Protein MalY | low | > 73 |
| Escherichia fergusonii Becca | 0.53 | EFB2_01296 | | Ribosomal large subunit pseudouridine synthase D | 0.30 | EFB2_02370 | | Protein MalY | low | > 86 |
| Escherichia coli BL21 | 0.53 | ECD_02484 | | 23S rRNA pseudouridine(1911,1915,1917) synthase | 0.30 | ECD_01591 | | PLP-dependent beta-cystathionase and maltose regulon regulator | low | > 60 |
| Escherichia coli BW25113 | 0.53 | b2594 | rluD | 23S rRNA pseudouridine synthase (NCBI) | 0.30 | b1622 | malY | bifunctional beta-cystathionase, PLP-dependent/ regulator of maltose regulon (NCBI) | — | — |
| Escherichia coli ECOR27 | 0.53 | NOLOHH_12925 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | 0.30 | NOLOHH_18100 | malY | bifunctional maltose regulon transcriptional repressor/cystathionine beta-lyase MalY | — | — |
| Escherichia coli ECRC62 | 0.53 | BNILDI_11730 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | 0.30 | BNILDI_16890 | malY | bifunctional maltose regulon transcriptional repressor/cystathionine beta-lyase MalY | — | — |
| Escherichia coli ECRC101 | 0.53 | MCAODC_11780 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | 0.30 | MCAODC_17825 | malY | bifunctional maltose regulon transcriptional repressor/cystathionine beta-lyase MalY | — | — |
| Escherichia coli ECRC98 | 0.53 | JDDGAC_24915 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | 0.30 | JDDGAC_02175 | malY | bifunctional maltose regulon transcriptional repressor/cystathionine beta-lyase MalY | — | — |
| Enterobacter asburiae PDN3 | 0.53 | EX28DRAFT_2695 | | pseudouridine synthase, RluA family | 0.30 | EX28DRAFT_1617 | | putative C-S lyase | low | > 76 |
| Escherichia coli ECOR38 | 0.53 | HEPCGN_20375 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | 0.30 | HEPCGN_05965 | malY | bifunctional maltose regulon transcriptional repressor/cystathionine beta-lyase MalY | low | > 85 |
| Escherichia coli ECRC99 | 0.53 | KEDOAH_06970 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | 0.30 | KEDOAH_00520 | malY | bifunctional maltose regulon transcriptional repressor/cystathionine beta-lyase MalY | — | — |
| Escherichia coli ECRC101 | 0.53 | OKFHMN_21250 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | 0.30 | OKFHMN_27585 | malY | bifunctional maltose regulon transcriptional repressor/cystathionine beta-lyase MalY | — | — |
| Enterobacter sp. TBS_079 | 0.52 | MPMX20_03463 | | Ribosomal large subunit pseudouridine synthase D | 0.29 | MPMX20_04048 | | Cystathionine beta-lyase PatB | low | > 85 |
| Pantoea sp. MT58 | 0.51 | IAI47_04425 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | 0.32 | IAI47_08380 | | putative C-S lyase | low | > 76 |
| Dechlorosoma suillum PS | 0.47 | Dsui_2530 | | pseudouridine synthase, RluA family | 0.32 | Dsui_3257 | | bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities | low | > 51 |
| Ralstonia solanacearum IBSBF1503 | 0.43 | RALBFv3_RS01520 | | RluA family pseudouridine synthase | 0.29 | RALBFv3_RS16055 | | putative C-S lyase | low | > 76 |
| Phocaeicola vulgatus CL09T03C04 | 0.35 | HMPREF1058_RS08615 | | RluA family pseudouridine synthase | 0.40 | HMPREF1058_RS07560 | | pyridoxal phosphate-dependent aminotransferase | low | > 67 |
| Phocaeicola dorei CL03T12C01 | 0.35 | ABI39_RS02845 | | RluA family pseudouridine synthase | 0.36 | ABI39_RS19290 | | pyridoxal phosphate-dependent aminotransferase | low | > 72 |
| Bosea sp. OAE506 | 0.35 | ABIE41_RS05635 | | RluA family pseudouridine synthase | 0.29 | ABIE41_RS12595 | | PatB family C-S lyase | low | > 77 |
| Bacteroides ovatus ATCC 8483 | 0.33 | BACOVA_03528 | | pseudouridine synthase, RluA family | 0.37 | BACOVA_00803 | | aminotransferase, class I/II | low | > 94 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.33 | BT3712 | | ribosomal large subunit pseudouridine synthase D (NCBI ptt file) | 0.37 | BT4138 | | putative aminotransferase (NCBI ptt file) | low | > 81 |
| Parabacteroides merdae CL09T00C40 | 0.33 | HMPREF1078_RS12640 | | RluA family pseudouridine synthase | 0.37 | HMPREF1078_RS16700 | | PatB family C-S lyase | low | > 61 |
| Phaeobacter inhibens DSM 17395 | 0.32 | PGA1_c09000 | | ribosomal large subunit pseudouridine synthase D | 0.31 | PGA1_c00860 | | cystathionine beta-lyase PatB | low | > 62 |
| Bacteroides stercoris CC31F | 0.32 | HMPREF1181_RS03250 | | RluA family pseudouridine synthase | 0.37 | HMPREF1181_RS06410 | | pyridoxal phosphate-dependent aminotransferase | low | > 56 |
| Dinoroseobacter shibae DFL-12 | 0.31 | Dshi_2610 | | pseudouridine synthase, RluA family (RefSeq) | 0.27 | Dshi_0178 | | aminotransferase class I and II (RefSeq) | 0.36 | 8 |
| Fusobacterium nucleatum SB010 | 0.30 | HUW76_08575 | | RluA family pseudouridine synthase | 0.30 | HUW76_06165 | | pyridoxal phosphate-dependent aminotransferase | low | > 35 |
| Mycobacterium tuberculosis H37Rv | 0.22 | Rv1540 | | Conserved hypothetical protein member of yabO/yceC/yfiI family | 0.25 | Rv0075 | | Probable aminotransferase | — | — |
| Bifidobacterium breve UCC2003 | 0.20 | BBR_RS17135 | | RluA family pseudouridine synthase | 0.33 | BBR_RS14535 | | pyridoxal phosphate-dependent aminotransferase | low | > 34 |
Not shown: 51 genomes with orthologs for HP15_527 only; 2 genomes with orthologs for HP15_3572 only