Conservation of cofitness between Psest_0956 and Psest_3296 in Pseudomonas stutzeri RCH2

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_0956 Transcriptional regulators 1.0 Psest_3296 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 0.33 17
Pseudomonas fluorescens SBW25 0.79 PFLU_RS25940 FCD domain-containing protein 0.71 PFLU_RS03755 PDZ domain-containing protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.79 PFLU_RS25940 FCD domain-containing protein 0.71 PFLU_RS03755 PDZ domain-containing protein low > 109
Pseudomonas fluorescens GW456-L13 0.78 PfGW456L13_5113 Lactate-responsive regulator LldR in Enterobacteria, GntR family 0.73 PfGW456L13_4998 Outer membrane stress sensor protease DegS low > 87
Pseudomonas fluorescens FW300-N1B4 0.78 Pf1N1B4_1185 Lactate-responsive regulator LldR in Enterobacteria, GntR family 0.75 Pf1N1B4_1061 Outer membrane stress sensor protease DegS — —
Pseudomonas fluorescens FW300-N2E3 0.78 AO353_05695 transcriptional regulator PdhR 0.72 AO353_05090 2-alkenal reductase low > 101
Pseudomonas sp. RS175 0.77 PFR28_00064 Pyruvate dehydrogenase complex repressor 0.73 PFR28_00191 Serine endoprotease DegS low > 88
Pseudomonas fluorescens FW300-N2C3 0.77 AO356_07545 transcriptional regulator PdhR 0.74 AO356_16655 2-alkenal reductase low > 104
Pseudomonas fluorescens FW300-N2E2 0.77 Pf6N2E2_3379 Lactate-responsive regulator LldR in Enterobacteria, GntR family 0.74 Pf6N2E2_5255 Outer membrane stress sensor protease DegS low > 103
Pseudomonas putida KT2440 0.75 PP_4734 DNA-binding transcriptional dual regulator, LldR-L-lactate 0.76 PP_1301 quality control serine endoprotease DegS low > 96
Pseudomonas sp. S08-1 0.75 OH686_17020 Lactate-responsive regulator LldR in Enterobacteria, GntR family 0.71 OH686_08460 Outer membrane stress sensor protease DegS low > 80
Pseudomonas simiae WCS417 0.74 PS417_24100 transcriptional regulator PdhR 0.74 PS417_03705 2-alkenal reductase low > 88
Enterobacter sp. TBS_079 0.41 MPMX20_00806 Pyruvate dehydrogenase complex repressor 0.31 MPMX20_04139 Serine endoprotease DegS — —
Serratia liquefaciens MT49 0.41 IAI46_21330 pyruvate dehydrogenase complex transcriptional repressor PdhR 0.32 IAI46_22395 outer membrane-stress sensor serine endopeptidase DegS — —
Dickeya dianthicola ME23 0.40 DZA65_RS19005 pyruvate dehydrogenase complex transcriptional repressor PdhR 0.32 DZA65_RS01580 outer membrane-stress sensor serine endopeptidase DegS low > 75
Dickeya dadantii 3937 0.40 DDA3937_RS17930 pyruvate dehydrogenase complex transcriptional repressor PdhR 0.32 DDA3937_RS01600 outer membrane-stress sensor serine endopeptidase DegS low > 74
Dickeya dianthicola 67-19 0.40 HGI48_RS17855 pyruvate dehydrogenase complex transcriptional repressor PdhR 0.32 HGI48_RS01515 outer membrane-stress sensor serine endopeptidase DegS low > 71
Pantoea sp. MT58 0.40 IAI47_15815 pyruvate dehydrogenase complex transcriptional repressor PdhR 0.31 IAI47_17265 outer membrane-stress sensor serine endopeptidase DegS — —
Klebsiella michiganensis M5al 0.40 BWI76_RS04875 transcriptional regulator PdhR 0.31 BWI76_RS25370 outer membrane-stress sensor serine endopeptidase DegS — —
Shewanella amazonensis SB2B 0.39 Sama_0374 pdhR transcriptional regulator PdhR (RefSeq) 0.35 Sama_3074 protease DegS (RefSeq) low > 62
Erwinia tracheiphila SCR3 0.39 LU632_RS03075 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR 0.32 LU632_RS21360 degS outer membrane-stress sensor serine endopeptidase DegS low > 74
Shewanella sp. ANA-3 0.39 Shewana3_0425 pdhR transcriptional regulator PdhR (RefSeq) 0.33 Shewana3_0689 DegS serine peptidase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.39 SO0423 pdhR pyruvate dehydrogenase complex repressor (NCBI ptt file) 0.32 SO3943 degS protease DegS (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.38 CSW01_12225 pyruvate dehydrogenase complex transcriptional repressor PdhR 0.32 CSW01_03015 outer membrane-stress sensor serine endopeptidase DegS — —
Alteromonas macleodii MIT1002 0.36 MIT1002_03004 Pyruvate dehydrogenase complex repressor 0.31 MIT1002_00841 Serine endoprotease DegS precursor — —
Castellaniella sp019104865 MT123 0.34 ABCV34_RS10290 transcriptional regulator LldR 0.42 ABCV34_RS12650 trypsin-like peptidase domain-containing protein low > 48
Paraburkholderia sabiae LMG 24235 0.32 QEN71_RS10135 FadR/GntR family transcriptional regulator 0.47 QEN71_RS27795 Do family serine endopeptidase low > 153
Cupriavidus basilensis FW507-4G11 0.32 RR42_RS21300 GntR family transcriptional regulator 0.48 RR42_RS18840 2-alkenal reductase low > 128
Burkholderia phytofirmans PsJN 0.30 BPHYT_RS26990 GntR family transcriptional regulator 0.48 BPHYT_RS17640 2-alkenal reductase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.29 H281DRAFT_02906 transcriptional regulator, GntR family 0.47 H281DRAFT_05667 serine protease DegQ low > 103
Paraburkholderia graminis OAS925 0.28 ABIE53_005884 GntR family transcriptional repressor for pyruvate dehydrogenase complex 0.46 ABIE53_003687 serine protease DegQ low > 113
Acinetobacter radioresistens SK82 0.28 MPMX26_02258 Putative L-lactate dehydrogenase operon regulatory protein 0.42 MPMX26_00998 Serine endoprotease DegS low > 36
Azospirillum brasilense Sp245 0.24 AZOBR_RS25130 GntR family transcriptional regulator 0.34 AZOBR_RS00340 peptidase low > 97
Hydrogenophaga sp. GW460-11-11-14-LB1 0.18 GFF5464 Transcriptional regulator, GntR family 0.43 GFF1300 Outer membrane stress sensor protease DegS low > 90

Not shown: 33 genomes with orthologs for Psest_0956 only; 15 genomes with orthologs for Psest_3296 only