Conservation of cofitness between GFF3286 and GFF2832 in Sphingobium sp. HT1-2

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF3286 Epoxyqueuosine reductase (EC 1.17.99.6) QueG 1.0 GFF2832 Maltodextrin glucosidase (EC 3.2.1.20) 0.76 3
Rhodopseudomonas palustris CGA009 0.59 TX73_000215 tRNA epoxyqueuosine(34) reductase QueG 0.36 TX73_024730 alpha-amylase family glycosyl hydrolase low > 86
Sinorhizobium meliloti 1021 0.58 SMc00406 4Fe-4S ferredoxin 0.49 SMc01532 alpha-glycosylase low > 103
Rhizobium sp. OAE497 0.58 ABIE40_RS01310 tRNA epoxyqueuosine(34) reductase QueG 0.49 ABIE40_RS03175 alpha-glucosidase 0.46 2
Dinoroseobacter shibae DFL-12 0.57 Dshi_3307 domain of unknown function DUF1730 (RefSeq) 0.48 Dshi_1649 alpha-glucosidase / maltase / trehalase / sucrase (EC 3.2.1.48; EC 3.2.1.20; EC 3.2.1.28) (from data) low > 64
Caulobacter crescentus NA1000 0.55 CCNA_03753 iron-sulfur cluster-binding protein 0.62 CCNA_02368 alpha-glucosidase low > 66
Caulobacter crescentus NA1000 Δfur 0.55 CCNA_03753 iron-sulfur cluster-binding protein 0.62 CCNA_02368 alpha-glucosidase low > 67
Brevundimonas sp. GW460-12-10-14-LB2 0.53 A4249_RS11375 tRNA epoxyqueuosine(34) reductase QueG 0.63 A4249_RS09955 alpha-amylase family glycosyl hydrolase low > 48
Agrobacterium fabrum C58 0.51 Atu0292 iron-sulfur cluster binding protein 0.49 Atu2295 alpha-glucosidase low > 89
Rahnella sp. WP5 0.38 EX31_RS08850 tRNA epoxyqueuosine(34) reductase QueG 0.30 EX31_RS10265 alpha-glucosidase low > 89
Shewanella amazonensis SB2B 0.38 Sama_2625 iron-sulfur cluster-binding protein (RefSeq) 0.49 Sama_1662 alpha amylase, catalytic region (RefSeq) low > 62
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS02540 tRNA epoxyqueuosine(34) reductase QueG 0.26 PFLU_RS24710 alpha,alpha-phosphotrehalase low > 109
Pseudomonas fluorescens SBW25 0.38 PFLU_RS02540 tRNA epoxyqueuosine(34) reductase QueG 0.26 PFLU_RS24710 alpha,alpha-phosphotrehalase low > 109
Pseudomonas lactucae CFBP13502 0.37 GEMAOFIL_00730 Epoxyqueuosine reductase 0.26 GEMAOFIL_04762 Trehalose-6-phosphate hydrolase low > 96
Pseudomonas simiae WCS417 0.37 PS417_02460 epoxyqueuosine reductase 0.26 PS417_23045 Alpha,alpha-phosphotrehalase (EC 3.2.1.93) (from data) low > 88
Klebsiella pneumoniae MKP103 0.37 KDGMDA_11005 tRNA epoxyqueuosine(34) reductase QueG 0.27 KDGMDA_11430 alpha alpha-phosphotrehalase low > 95
Xanthomonas campestris pv. campestris strain 8004 0.37 Xcc-8004.2252.1 Epoxyqueuosine (oQ) reductase QueG 0.49 Xcc-8004.2057.1 Maltodextrin glucosidase (EC 3.2.1.20) low > 74
Pseudomonas orientalis W4I3 0.37 QF045_RS05520 tRNA epoxyqueuosine(34) reductase QueG 0.26 QF045_RS25255 alpha,alpha-phosphotrehalase low > 93
Serratia liquefaciens MT49 0.37 IAI46_01595 tRNA epoxyqueuosine(34) reductase QueG 0.31 IAI46_12925 alpha-glucosidase low > 87
Pseudomonas sp. DMC3 0.37 GFF3214 Epoxyqueuosine reductase 0.25 GFF4322 Trehalose-6-phosphate hydrolase low > 89
Pseudomonas fluorescens FW300-N2E3 0.37 AO353_13115 epoxyqueuosine reductase 0.27 AO353_15985 Alpha,alpha-phosphotrehalase (EC 3.2.1.93) (from data) low > 101
Pseudomonas fluorescens FW300-N1B4 0.37 Pf1N1B4_1418 Epoxyqueuosine (oQ) reductase QueG 0.26 Pf1N1B4_835 Trehalose-6-phosphate hydrolase (EC 3.2.1.93) low > 87
Lysobacter sp. OAE881 0.36 ABIE51_RS08045 tRNA epoxyqueuosine(34) reductase QueG 0.48 ABIE51_RS18995 alpha-glucosidase family protein low > 62
Dyella japonica UNC79MFTsu3.2 0.36 ABZR86_RS00835 tRNA epoxyqueuosine(34) reductase QueG 0.49 ABZR86_RS16975 alpha-glucosidase low > 74
Pseudomonas sp. RS175 0.36 PFR28_05115 Epoxyqueuosine reductase 0.32 PFR28_01852 Oligo-1,6-glucosidase 1 low > 88
Rhodanobacter sp. FW510-T8 0.36 OKGIIK_03900 queG tRNA epoxyqueuosine(34) reductase QueG 0.48 OKGIIK_02445 amyA alpha-glucosidase low > 53
Vibrio cholerae E7946 ATCC 55056 0.36 CSW01_01810 tRNA epoxyqueuosine(34) reductase QueG 0.27 CSW01_04665 alpha,alpha-phosphotrehalase
Variovorax sp. SCN45 0.36 GFF4805 Epoxyqueuosine reductase (EC 1.17.99.6) QueG 0.47 GFF6332 Maltodextrin glucosidase (EC 3.2.1.20) low > 127
Rhodanobacter denitrificans MT42 0.36 LRK55_RS14845 tRNA epoxyqueuosine(34) reductase QueG 0.48 LRK55_RS12785 alpha-glucosidase family protein low > 63
Rhodanobacter sp000427505 FW510-R12 0.35 LRK53_RS13485 tRNA epoxyqueuosine(34) reductase QueG 0.48 LRK53_RS15480 alpha-glucosidase family protein low > 59
Rhodanobacter denitrificans FW104-10B01 0.35 LRK54_RS15130 tRNA epoxyqueuosine(34) reductase QueG 0.48 LRK54_RS13085 alpha-glucosidase family protein low > 59
Shewanella oneidensis MR-1 0.35 SO3861 iron-sulfur cluster-binding protein (NCBI ptt file) 0.49 SO2213 oligo-1,6-glucosidase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.34 Shewana3_0745 putative iron-sulfur cluster binding protein (RefSeq) 0.50 Shewana3_2311 Alpha-glucosidase (EC 3.2.1.20) (from data) low > 73
Shewanella loihica PV-4 0.34 Shew_2979 putative iron-sulfur cluster binding protein (RefSeq) 0.49 Shew_1889 alpha amylase, catalytic region (RefSeq) low > 60
Paraburkholderia sabiae LMG 24235 0.34 QEN71_RS02745 tRNA epoxyqueuosine(34) reductase QueG 0.37 QEN71_RS19395 alpha-amylase family glycosyl hydrolase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.31 H281DRAFT_04128 epoxyqueuosine reductase 0.38 H281DRAFT_02777 alpha-glucosidase low > 103
Echinicola vietnamensis KMM 6221, DSM 17526 0.29 Echvi_0824 iron-sulfur cluster binding protein, putative 0.17 Echvi_2850 Alpha-amylase (EC 3.2.1.1) (from data) low > 79

Not shown: 70 genomes with orthologs for GFF3286 only; 6 genomes with orthologs for GFF2832 only