| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
| Sphingobium sp. HT1-2 | 1.0 | GFF3286 | | Epoxyqueuosine reductase (EC 1.17.99.6) QueG | 1.0 | GFF2832 | | Maltodextrin glucosidase (EC 3.2.1.20) | 0.76 | 3 |
| Rhodopseudomonas palustris CGA009 | 0.59 | TX73_000215 | | tRNA epoxyqueuosine(34) reductase QueG | 0.36 | TX73_024730 | | alpha-amylase family glycosyl hydrolase | low | > 86 |
| Sinorhizobium meliloti 1021 | 0.58 | SMc00406 | | 4Fe-4S ferredoxin | 0.49 | SMc01532 | | alpha-glycosylase | low | > 103 |
| Rhizobium sp. OAE497 | 0.58 | ABIE40_RS01310 | | tRNA epoxyqueuosine(34) reductase QueG | 0.49 | ABIE40_RS03175 | | alpha-glucosidase | 0.46 | 2 |
| Dinoroseobacter shibae DFL-12 | 0.57 | Dshi_3307 | | domain of unknown function DUF1730 (RefSeq) | 0.48 | Dshi_1649 | | alpha-glucosidase / maltase / trehalase / sucrase (EC 3.2.1.48; EC 3.2.1.20; EC 3.2.1.28) (from data) | low | > 64 |
| Caulobacter crescentus NA1000 | 0.55 | CCNA_03753 | | iron-sulfur cluster-binding protein | 0.62 | CCNA_02368 | | alpha-glucosidase | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.55 | CCNA_03753 | | iron-sulfur cluster-binding protein | 0.62 | CCNA_02368 | | alpha-glucosidase | low | > 67 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.53 | A4249_RS11375 | | tRNA epoxyqueuosine(34) reductase QueG | 0.63 | A4249_RS09955 | | alpha-amylase family glycosyl hydrolase | low | > 48 |
| Agrobacterium fabrum C58 | 0.51 | Atu0292 | | iron-sulfur cluster binding protein | 0.49 | Atu2295 | | alpha-glucosidase | low | > 89 |
| Rahnella sp. WP5 | 0.38 | EX31_RS08850 | | tRNA epoxyqueuosine(34) reductase QueG | 0.30 | EX31_RS10265 | | alpha-glucosidase | low | > 89 |
| Shewanella amazonensis SB2B | 0.38 | Sama_2625 | | iron-sulfur cluster-binding protein (RefSeq) | 0.49 | Sama_1662 | | alpha amylase, catalytic region (RefSeq) | low | > 62 |
| Pseudomonas fluorescens SBW25-INTG | 0.38 | PFLU_RS02540 | | tRNA epoxyqueuosine(34) reductase QueG | 0.26 | PFLU_RS24710 | | alpha,alpha-phosphotrehalase | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.38 | PFLU_RS02540 | | tRNA epoxyqueuosine(34) reductase QueG | 0.26 | PFLU_RS24710 | | alpha,alpha-phosphotrehalase | low | > 109 |
| Pseudomonas lactucae CFBP13502 | 0.37 | GEMAOFIL_00730 | | Epoxyqueuosine reductase | 0.26 | GEMAOFIL_04762 | | Trehalose-6-phosphate hydrolase | low | > 96 |
| Pseudomonas simiae WCS417 | 0.37 | PS417_02460 | | epoxyqueuosine reductase | 0.26 | PS417_23045 | | Alpha,alpha-phosphotrehalase (EC 3.2.1.93) (from data) | low | > 88 |
| Klebsiella pneumoniae MKP103 | 0.37 | KDGMDA_11005 | | tRNA epoxyqueuosine(34) reductase QueG | 0.27 | KDGMDA_11430 | | alpha alpha-phosphotrehalase | low | > 95 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.37 | Xcc-8004.2252.1 | | Epoxyqueuosine (oQ) reductase QueG | 0.49 | Xcc-8004.2057.1 | | Maltodextrin glucosidase (EC 3.2.1.20) | low | > 74 |
| Pseudomonas orientalis W4I3 | 0.37 | QF045_RS05520 | | tRNA epoxyqueuosine(34) reductase QueG | 0.26 | QF045_RS25255 | | alpha,alpha-phosphotrehalase | low | > 93 |
| Serratia liquefaciens MT49 | 0.37 | IAI46_01595 | | tRNA epoxyqueuosine(34) reductase QueG | 0.31 | IAI46_12925 | | alpha-glucosidase | low | > 87 |
| Pseudomonas sp. DMC3 | 0.37 | GFF3214 | | Epoxyqueuosine reductase | 0.25 | GFF4322 | | Trehalose-6-phosphate hydrolase | low | > 89 |
| Pseudomonas fluorescens FW300-N2E3 | 0.37 | AO353_13115 | | epoxyqueuosine reductase | 0.27 | AO353_15985 | | Alpha,alpha-phosphotrehalase (EC 3.2.1.93) (from data) | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.37 | Pf1N1B4_1418 | | Epoxyqueuosine (oQ) reductase QueG | 0.26 | Pf1N1B4_835 | | Trehalose-6-phosphate hydrolase (EC 3.2.1.93) | low | > 87 |
| Lysobacter sp. OAE881 | 0.36 | ABIE51_RS08045 | | tRNA epoxyqueuosine(34) reductase QueG | 0.48 | ABIE51_RS18995 | | alpha-glucosidase family protein | low | > 62 |
| Dyella japonica UNC79MFTsu3.2 | 0.36 | ABZR86_RS00835 | | tRNA epoxyqueuosine(34) reductase QueG | 0.49 | ABZR86_RS16975 | | alpha-glucosidase | low | > 74 |
| Pseudomonas sp. RS175 | 0.36 | PFR28_05115 | | Epoxyqueuosine reductase | 0.32 | PFR28_01852 | | Oligo-1,6-glucosidase 1 | low | > 88 |
| Rhodanobacter sp. FW510-T8 | 0.36 | OKGIIK_03900 | queG | tRNA epoxyqueuosine(34) reductase QueG | 0.48 | OKGIIK_02445 | amyA | alpha-glucosidase | low | > 53 |
| Vibrio cholerae E7946 ATCC 55056 | 0.36 | CSW01_01810 | | tRNA epoxyqueuosine(34) reductase QueG | 0.27 | CSW01_04665 | | alpha,alpha-phosphotrehalase | — | — |
| Variovorax sp. SCN45 | 0.36 | GFF4805 | | Epoxyqueuosine reductase (EC 1.17.99.6) QueG | 0.47 | GFF6332 | | Maltodextrin glucosidase (EC 3.2.1.20) | low | > 127 |
| Rhodanobacter denitrificans MT42 | 0.36 | LRK55_RS14845 | | tRNA epoxyqueuosine(34) reductase QueG | 0.48 | LRK55_RS12785 | | alpha-glucosidase family protein | low | > 63 |
| Rhodanobacter sp000427505 FW510-R12 | 0.35 | LRK53_RS13485 | | tRNA epoxyqueuosine(34) reductase QueG | 0.48 | LRK53_RS15480 | | alpha-glucosidase family protein | low | > 59 |
| Rhodanobacter denitrificans FW104-10B01 | 0.35 | LRK54_RS15130 | | tRNA epoxyqueuosine(34) reductase QueG | 0.48 | LRK54_RS13085 | | alpha-glucosidase family protein | low | > 59 |
| Shewanella oneidensis MR-1 | 0.35 | SO3861 | | iron-sulfur cluster-binding protein (NCBI ptt file) | 0.49 | SO2213 | | oligo-1,6-glucosidase (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.34 | Shewana3_0745 | | putative iron-sulfur cluster binding protein (RefSeq) | 0.50 | Shewana3_2311 | | Alpha-glucosidase (EC 3.2.1.20) (from data) | low | > 73 |
| Shewanella loihica PV-4 | 0.34 | Shew_2979 | | putative iron-sulfur cluster binding protein (RefSeq) | 0.49 | Shew_1889 | | alpha amylase, catalytic region (RefSeq) | low | > 60 |
| Paraburkholderia sabiae LMG 24235 | 0.34 | QEN71_RS02745 | | tRNA epoxyqueuosine(34) reductase QueG | 0.37 | QEN71_RS19395 | | alpha-amylase family glycosyl hydrolase | low | > 153 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.31 | H281DRAFT_04128 | | epoxyqueuosine reductase | 0.38 | H281DRAFT_02777 | | alpha-glucosidase | low | > 103 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.29 | Echvi_0824 | | iron-sulfur cluster binding protein, putative | 0.17 | Echvi_2850 | | Alpha-amylase (EC 3.2.1.1) (from data) | low | > 79 |
Not shown: 70 genomes with orthologs for GFF3286 only; 6 genomes with orthologs for GFF2832 only