Conservation of cofitness between GFF4864 and GFF2813 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF4864 COG2363 1.0 GFF2813 YcgN (Fragment) 0.70 6
Escherichia coli ECOR38 0.93 HEPCGN_19380 ygdD DUF423 domain-containing protein 0.91 HEPCGN_24695 ycgN YcgN family cysteine cluster protein low > 87
Escherichia coli ECRC98 0.93 JDDGAC_23790 ygdD UPF0382 inner membrane protein YgdD 0.91 JDDGAC_06265 ycgN YcgN family cysteine cluster protein
Escherichia coli ECRC101 0.93 MCAODC_10650 ygdD UPF0382 inner membrane protein YgdD 0.91 MCAODC_21925 ycgN YcgN family cysteine cluster protein low > 87
Escherichia coli BW25113 0.93 b2807 ygdD conserved inner membrane protein (NCBI) 0.93 b1181 ycgN conserved protein (RefSeq) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.93 OHPLBJKB_00924 hypothetical protein 0.91 OHPLBJKB_02510 hypothetical protein low > 73
Escherichia coli ECRC102 0.93 NIAGMN_17895 ygdD UPF0382 inner membrane protein YgdD 0.91 NIAGMN_27975 ycgN YcgN family cysteine cluster protein
Escherichia coli BL21 0.93 ECD_02658 UPF0382 family inner membrane protein 0.92 ECD_01156 UPF0153 family cysteine cluster protein
Escherichia coli Nissle 1917 0.93 ECOLIN_RS15645 DUF423 domain-containing protein 0.91 ECOLIN_RS07145 YcgN family cysteine cluster protein
Escherichia fergusonii Becca 0.93 EFB2_01110 hypothetical protein 0.91 EFB2_02750 hypothetical protein low > 86
Escherichia coli ECRC99 0.93 KEDOAH_08005 ygdD UPF0382 inner membrane protein YgdD 0.91 KEDOAH_25260 ycgN YcgN family cysteine cluster protein
Escherichia coli ECRC100 0.93 OKFHMN_20125 ygdD UPF0382 inner membrane protein YgdD 0.91 OKFHMN_28245 ycgN YcgN family cysteine cluster protein
Escherichia coli ECOR27 0.93 NOLOHH_12005 ygdD UPF0382 inner membrane protein YgdD 0.91 NOLOHH_20775 ycgN YcgN family cysteine cluster protein low > 75
Escherichia coli ECRC62 0.93 BNILDI_10510 ygdD UPF0382 inner membrane protein YgdD 0.93 BNILDI_18935 ycgN YcgN family cysteine cluster protein low > 75
Enterobacter sp. TBS_079 0.91 MPMX20_03670 hypothetical protein 0.85 MPMX20_02704 hypothetical protein low > 85
Klebsiella michiganensis M5al 0.91 BWI76_RS22950 membrane protein 0.88 BWI76_RS17765 hypothetical protein low > 92
Enterobacter asburiae PDN3 0.90 EX28DRAFT_2882 Uncharacterized small membrane protein 0.87 EX28DRAFT_0761 Uncharacterized conserved protein low > 76
Pectobacterium carotovorum WPP14 0.82 HER17_RS16410 DUF423 domain-containing protein 0.78 HER17_RS11240 YcgN family cysteine cluster protein low > 75
Serratia liquefaciens MT49 0.78 IAI46_20335 DUF423 domain-containing protein 0.82 IAI46_14490 YcgN family cysteine cluster protein low > 86
Rahnella sp. WP5 0.75 EX31_RS13105 DUF423 domain-containing protein 0.74 EX31_RS10560 YcgN family cysteine cluster protein low > 89
Pantoea sp. MT58 0.75 IAI47_04030 DUF423 domain-containing protein 0.76 IAI47_08870 YcgN family cysteine cluster protein low > 76
Erwinia tracheiphila SCR3 0.73 LU632_RS06260 DUF423 domain-containing protein 0.77 LU632_RS13100 YcgN family cysteine cluster protein low > 74
Dickeya dadantii 3937 0.71 DDA3937_RS05055 DUF423 domain-containing protein 0.78 DDA3937_RS11190 YcgN family cysteine cluster protein low > 74
Dickeya dianthicola ME23 0.66 DZA65_RS05395 DUF423 domain-containing protein 0.77 DZA65_RS11570 YcgN family cysteine cluster protein low > 75
Dickeya dianthicola 67-19 0.65 HGI48_RS05055 DUF423 domain-containing protein 0.77 HGI48_RS11225 YcgN family cysteine cluster protein low > 71
Pseudomonas putida KT2440 0.33 PP_5106 conserved inner membrane protein 0.50 PP_4587 conserved protein of unknown function low > 96
Pseudomonas sp. S08-1 0.33 OH686_14275 hypothetical regulator 0.48 OH686_05300 UPF0260 protein YcgN low > 80
Pseudomonas simiae WCS417 0.32 PS417_26785 membrane protein 0.46 PS417_07400 hypothetical protein low > 88
Pseudomonas stutzeri RCH2 0.31 Psest_0265 Uncharacterized small membrane protein 0.47 Psest_2992 Uncharacterized conserved protein low > 67
Pseudomonas fluorescens SBW25 0.31 PFLU_RS28430 DUF423 domain-containing protein 0.46 PFLU_RS07485 YcgN family cysteine cluster protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.31 PFLU_RS28430 DUF423 domain-containing protein 0.46 PFLU_RS07485 YcgN family cysteine cluster protein low > 109
Pseudomonas syringae pv. syringae B728a 0.30 Psyr_4742 Protein of unknown function DUF423 0.49 Psyr_1567 Uncharacterized conserved protein UCP006173
Pseudomonas syringae pv. syringae B728a ΔmexB 0.30 Psyr_4742 Protein of unknown function DUF423 0.49 Psyr_1567 Uncharacterized conserved protein UCP006173 low > 86
Shewanella loihica PV-4 0.29 Shew_2762 hypothetical protein (RefSeq) 0.53 Shew_2181 hypothetical protein (RefSeq)
Caulobacter crescentus NA1000 0.28 CCNA_01289 hypothetical protein 0.46 CCNA_03385 flagellin N-methylase low > 66
Caulobacter crescentus NA1000 Δfur 0.28 CCNA_01289 hypothetical protein 0.46 CCNA_03385 flagellin N-methylase low > 67
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_4588 COG2363 0.50 Pf6N2E2_2723 YcgN (Fragment) low > 103
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_08225 hypothetical protein 0.48 AO353_17875 hypothetical protein low > 101
Shewanella oneidensis MR-1 0.28 SO1535 conserved hypothetical protein (NCBI ptt file) 0.53 SO2573 conserved hypothetical protein (NCBI ptt file) low > 76
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_13365 hypothetical protein 0.50 AO356_04400 hypothetical protein low > 104
Pseudomonas sp. RS175 0.27 PFR28_04254 hypothetical protein 0.50 PFR28_00716 hypothetical protein low > 88
Shewanella sp. ANA-3 0.27 Shewana3_2892 hypothetical protein (RefSeq) 0.50 Shewana3_2379 hypothetical protein (RefSeq) low > 73
Pseudomonas fluorescens FW300-N1B4 0.27 Pf1N1B4_2329 COG2363 0.50 Pf1N1B4_3349 YcgN (Fragment) low > 87
Marinobacter adhaerens HP15 0.26 HP15_3276 membrane protein containing DUF423 0.51 HP15_1880 uncharacterized conserved protein UCP006173
Pseudomonas fluorescens GW456-L13 0.26 PfGW456L13_998 COG2363 0.49 PfGW456L13_4492 YcgN (Fragment) low > 87
Shewanella amazonensis SB2B 0.26 Sama_2427 hypothetical protein (RefSeq) 0.51 Sama_1927 hypothetical protein (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.23 CSW01_04595 DUF423 domain-containing protein 0.62 CSW01_05385 YcgN family cysteine cluster protein low > 62
Acinetobacter radioresistens SK82 0.21 MPMX26_01109 hypothetical protein 0.40 MPMX26_02991 hypothetical protein low > 36

Not shown: 10 genomes with orthologs for GFF4864 only; 13 genomes with orthologs for GFF2813 only