Conservation of cofitness between GFF5228 and GFF2715 in Hydrogenophaga sp. GW460-11-11-14-LB1

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF5228 Transcriptional regulator, TetR family 1.0 GFF2715 rRNA small subunit methyltransferase I 0.78 4
Acidovorax sp. GW101-3H11 0.64 Ac3H11_1230 Transcriptional regulator, TetR family 0.57 Ac3H11_4466 rRNA small subunit methyltransferase I
Castellaniella sp019104865 MT123 0.58 ABCV34_RS11575 TetR/AcrR family transcriptional regulator 0.39 ABCV34_RS14320 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 48
Sinorhizobium meliloti 1021 0.47 SM_b20033 transcriptional regulator 0.29 SMc00416 hypothetical protein low > 103
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_03218 transcriptional regulator, TetR family 0.39 H281DRAFT_02152 16S rRNA (cytidine1402-2'-O)-methyltransferase 0.42 59
Pseudomonas fluorescens FW300-N2E3 0.45 AO353_06180 TetR family transcriptional regulator 0.38 AO353_15290 methyltransferase low > 101
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_1426 Transcriptional regulator, TetR family 0.38 PfGW456L13_1643 rRNA small subunit methyltransferase I low > 87
Pseudomonas fluorescens FW300-N1B4 0.45 Pf1N1B4_2748 Transcriptional regulator, TetR family 0.38 Pf1N1B4_953 rRNA small subunit methyltransferase I
Agrobacterium fabrum C58 0.45 Atu4530 TetR family transcriptional regulator 0.27 Atu0302 tetrapyrrole methylase family protein low > 89
Pseudomonas sp. RS175 0.44 PFR28_03812 HTH-type transcriptional repressor NicS 0.39 PFR28_03597 Ribosomal RNA small subunit methyltransferase I low > 88
Paraburkholderia graminis OAS925 0.44 ABIE53_004073 AcrR family transcriptional regulator 0.37 ABIE53_000470 16S rRNA (cytidine1402-2'-O)-methyltransferase low > 113
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS22695 TetR family transcriptional regulator 0.41 BPHYT_RS01940 16S rRNA methyltransferase low > 109
Ralstonia solanacearum IBSBF1503 0.44 RALBFv3_RS17460 TetR/AcrR family transcriptional regulator 0.46 RALBFv3_RS08495 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 76
Ralstonia solanacearum UW163 0.44 UW163_RS21690 TetR/AcrR family transcriptional regulator 0.46 UW163_RS05115 16S rRNA (cytidine(1402)-2'-O)-methyltransferase
Pseudomonas fluorescens FW300-N2E2 0.44 Pf6N2E2_5059 Transcriptional regulator, TetR family 0.39 Pf6N2E2_5346 rRNA small subunit methyltransferase I low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.44 Psyr_2131 transcriptional regulator, TetR family 0.37 Psyr_4112 Protein of unknown function UPF0011 low > 86
Pseudomonas putida KT2440 0.44 PP_3527 Transcriptional regulator, TetR family 0.34 PP_1326 16S rRNA 2'-O-ribose C1402 methyltransferase low > 96
Pseudomonas syringae pv. syringae B728a 0.44 Psyr_2131 transcriptional regulator, TetR family 0.37 Psyr_4112 Protein of unknown function UPF0011 low > 86
Ralstonia solanacearum GMI1000 0.44 RS_RS23855 TetR/AcrR family transcriptional regulator 0.44 RS_RS16360 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 80
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_15585 TetR family transcriptional regulator 0.38 AO356_17110 methyltransferase low > 104
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS26365 TetR/AcrR family transcriptional regulator 0.41 PFLU_RS04655 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 109
Pseudomonas fluorescens SBW25 0.43 PFLU_RS26365 TetR/AcrR family transcriptional regulator 0.41 PFLU_RS04655 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 109
Azospirillum sp. SherDot2 0.42 MPMX19_03530 HTH-type transcriptional repressor NicS 0.29 MPMX19_02471 Ribosomal RNA small subunit methyltransferase I low > 112
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS13120 TetR family transcriptional regulator 0.43 QEN71_RS00655 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.64 106
Pseudomonas simiae WCS417 0.42 PS417_24440 TetR family transcriptional regulator 0.40 PS417_04590 methyltransferase low > 88
Ralstonia solanacearum PSI07 0.42 RPSI07_RS06190 TetR/AcrR family transcriptional regulator 0.45 RPSI07_RS08730 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 81
Pantoea sp. MT58 0.35 IAI47_07270 TetR family transcriptional regulator 0.34 IAI47_02850 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 76
Rahnella sp. WP5 0.35 EX31_RS06045 TetR family transcriptional regulator 0.34 EX31_RS12550 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 89
Klebsiella michiganensis M5al 0.34 BWI76_RS16950 TetR family transcriptional regulator 0.35 BWI76_RS24910 rRNA (cytidine-2'-O-)-methyltransferase low > 92
Serratia liquefaciens MT49 0.32 IAI46_12895 TetR family transcriptional regulator 0.34 IAI46_22295 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 86
Enterobacter asburiae PDN3 0.31 EX28DRAFT_3565 transcriptional regulator, TetR family 0.36 EX28DRAFT_3195 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 76
Enterobacter sp. TBS_079 0.31 MPMX20_00655 HTH-type transcriptional repressor NicS 0.36 MPMX20_04050 Ribosomal RNA small subunit methyltransferase I low > 85
Dyella japonica UNC79MFTsu3.2 0.13 ABZR86_RS09915 TetR/AcrR family transcriptional regulator 0.38 ABZR86_RS11380 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 74

Not shown: 0 genomes with orthologs for GFF5228 only; 54 genomes with orthologs for GFF2715 only