Conservation of cofitness between GFF4865 and GFF2572 in Hydrogenophaga sp. GW460-11-11-14-LB1

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF4865 Type IV pilus biogenesis protein PilF 1.0 GFF2572 Uncharacterized protein with LysM domain, COG1652 0.68 4
Variovorax sp. OAS795 0.49 ABID97_RS14215 type IV pilus biogenesis/stability protein PilW 0.53 ABID97_RS01825 LysM peptidoglycan-binding domain-containing protein 0.93 6
Variovorax sp. SCN45 0.48 GFF993 Type IV pilus biogenesis protein PilF 0.52 GFF5490 Uncharacterized protein with LysM domain, COG1652 0.99 9
Acidovorax sp. GW101-3H11 0.47 Ac3H11_1792 Type IV pilus biogenesis protein PilF 0.52 Ac3H11_4410 Uncharacterized protein with LysM domain, COG1652 low > 79
Ralstonia solanacearum GMI1000 0.31 RS_RS06075 type IV pilus biogenesis/stability protein PilW 0.34 RS_RS00345 LysM peptidoglycan-binding domain-containing protein — —
Ralstonia solanacearum IBSBF1503 0.31 RALBFv3_RS15265 type IV pilus biogenesis/stability protein PilW 0.34 RALBFv3_RS09760 LysM peptidoglycan-binding domain-containing protein — —
Ralstonia solanacearum UW163 0.31 UW163_RS12730 type IV pilus biogenesis/stability protein PilW 0.34 UW163_RS03820 LysM peptidoglycan-binding domain-containing protein — —
Ralstonia solanacearum PSI07 0.30 RPSI07_RS18110 type IV pilus biogenesis/stability protein PilW 0.34 RPSI07_RS23605 LysM peptidoglycan-binding domain-containing protein low > 81
Ralstonia sp. UNC404CL21Col 0.29 ABZR87_RS10905 type IV pilus biogenesis/stability protein PilW 0.34 ABZR87_RS04980 LysM peptidoglycan-binding domain-containing protein 0.95 13
Dechlorosoma suillum PS 0.23 Dsui_3144 type IV pilus biogenesis/stability protein PilW 0.26 Dsui_0818 LysM domain-containing protein low > 51
Rhodanobacter sp. FW510-T8 0.21 OKGIIK_07135 pilW type IV pilus biogenesis/stability protein PilW 0.18 OKGIIK_13775 xkdP peptidoglycan-binding protein low > 52
Rhodanobacter denitrificans FW104-10B01 0.21 LRK54_RS00075 type IV pilus biogenesis/stability protein PilW 0.18 LRK54_RS10140 LysM peptidoglycan-binding domain-containing protein low > 59
Rhodanobacter denitrificans MT42 0.21 LRK55_RS18070 type IV pilus biogenesis/stability protein PilW 0.18 LRK55_RS09780 LysM domain-containing protein low > 63
Dyella japonica UNC79MFTsu3.2 0.17 ABZR86_RS05450 type IV pilus biogenesis/stability protein PilW 0.18 ABZR86_RS13875 LysM domain-containing protein low > 74
Pseudomonas stutzeri RCH2 0.16 Psest_1260 type IV pilus biogenesis/stability protein PilW 0.26 Psest_0024 LysM domain. 0.52 24
Shewanella loihica PV-4 0.16 Shew_1288 type IV pilus biogenesis/stability protein PilW (RefSeq) 0.16 Shew_3735 peptidoglycan-binding LysM (RefSeq) low > 60
Pseudomonas syringae pv. syringae B728a ΔmexB 0.15 Psyr_1246 TPR repeat protein:TPR repeat protein 0.25 Psyr_0020 Peptidoglycan-binding LysM low > 86
Pseudomonas syringae pv. syringae B728a 0.15 Psyr_1246 TPR repeat protein:TPR repeat protein 0.25 Psyr_0020 Peptidoglycan-binding LysM low > 86
Pseudomonas sp. S08-1 0.14 OH686_17520 type IV pilus biogenesis/stability protein PilW 0.26 OH686_12510 Uncharacterized protein with LysM domain low > 80
Xanthomonas campestris pv. campestris strain 8004 0.14 Xcc-8004.2736.1 Type IV pilus biogenesis protein PilF 0.15 Xcc-8004.4744.1 Uncharacterized protein with LysM domain, COG1652 low > 74
Vibrio cholerae E7946 ATCC 55056 0.14 CSW01_08105 type IV pilus biogenesis/stability protein PilW 0.15 CSW01_00240 LysM peptidoglycan-binding domain-containing protein low > 62
Shewanella sp. ANA-3 0.14 Shewana3_1227 type IV pilus biogenesis/stability protein PilW (RefSeq) 0.16 Shewana3_0036 peptidoglycan-binding LysM (RefSeq) — —
Pseudomonas fluorescens FW300-N2C3 0.14 AO356_06600 pilus assembly protein PilW 0.25 AO356_11290 peptidoglycan-binding protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.14 Pf6N2E2_3180 Type IV pilus biogenesis protein PilF 0.24 Pf6N2E2_4124 Uncharacterized protein with LysM domain, COG1652 low > 103
Shewanella amazonensis SB2B 0.14 Sama_2367 fimbrial biogenesis and twitching motility protein, putative (RefSeq) 0.16 Sama_0044 LysM domain-containing protein (RefSeq) low > 62
Kangiella aquimarina DSM 16071 0.14 B158DRAFT_1150 type IV pilus biogenesis/stability protein PilW 0.23 B158DRAFT_0399 LysM domain. 0.72 2
Shewanella oneidensis MR-1 0.13 SO3314 fimbrial biogenesis and twitching motility protein, putative (NCBI ptt file) 0.16 SO0033 LysM domain protein (NCBI ptt file) low > 76
Acinetobacter radioresistens SK82 0.12 MPMX26_00427 Lipopolysaccharide assembly protein B 0.20 MPMX26_00115 hypothetical protein 0.61 25
Marinobacter adhaerens HP15 0.11 HP15_1491 type IV pilus biogenesis protein PilF 0.25 HP15_3745 protein containing LysM domain — —

Not shown: 6 genomes with orthologs for GFF4865 only; 6 genomes with orthologs for GFF2572 only