Conservation of cofitness between GFF1082 and GFF2138 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF1082 Putative alanine/glycine transport protein 1.0 GFF2138 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.94 5
Escherichia coli HS(pFamp)R (ATCC 700891) 0.74 OHPLBJKB_03653 Amino-acid carrier protein AlsT 0.95 OHPLBJKB_00458 Ribonuclease G low > 73
Escherichia coli ECOR38 0.74 HEPCGN_09090 yaaJ Uncharacterized transporter YaaJ 0.95 HEPCGN_16610 rng ribonuclease G low > 87
Escherichia coli ECRC101 0.74 MCAODC_01600 yaaJ Uncharacterized transporter YaaJ 0.95 MCAODC_08265 rng ribonuclease G low > 87
Escherichia coli BL21 0.74 ECD_00007 putative transporter 0.95 ECD_03106 ribonuclease G low > 61
Escherichia coli BW25113 0.74 b0007 yaaJ predicted transporter (NCBI) 0.95 b3247 cafA bundles of cytoplasmic filaments (VIMSS) low > 76
Escherichia coli ECRC100 0.74 OKFHMN_11085 yaaJ Uncharacterized transporter YaaJ 0.95 OKFHMN_17745 rng ribonuclease G low > 80
Escherichia coli ECRC102 0.74 NIAGMN_08935 yaaJ Uncharacterized transporter YaaJ 0.95 NIAGMN_15505 rng ribonuclease G — —
Escherichia coli ECRC99 0.74 KEDOAH_17070 yaaJ Uncharacterized transporter YaaJ 0.95 KEDOAH_10405 rng ribonuclease G — —
Escherichia coli ECRC98 0.74 JDDGAC_14680 yaaJ Uncharacterized transporter YaaJ 0.95 JDDGAC_21370 rng ribonuclease G low > 86
Escherichia coli ECRC62 0.74 BNILDI_08190 yaaJ Uncharacterized transporter YaaJ 0.95 BNILDI_01990 rng ribonuclease G low > 75
Escherichia coli ECOR27 0.74 NOLOHH_03415 yaaJ Uncharacterized transporter YaaJ 0.95 NOLOHH_09530 rng ribonuclease G low > 75
Escherichia fergusonii Becca 0.73 EFB2_04036 Amino-acid carrier protein AlsT 0.95 EFB2_00584 Ribonuclease G low > 86
Escherichia coli Nissle 1917 0.73 ECOLIN_RS00040 sodium:alanine symporter family protein 0.95 ECOLIN_RS18605 ribonuclease G low > 55
Enterobacter asburiae PDN3 0.73 EX28DRAFT_3619 amino acid carrier protein 0.94 EX28DRAFT_3297 ribonuclease, Rne/Rng family low > 76
Klebsiella michiganensis M5al 0.70 BWI76_RS04265 sodium:alanine symporter family protein 0.94 BWI76_RS25480 ribonuclease E/G low > 92
Enterobacter sp. TBS_079 0.70 MPMX20_00715 Amino-acid carrier protein AlsT 0.94 MPMX20_04153 Ribonuclease G low > 85
Serratia liquefaciens MT49 0.54 IAI46_03050 sodium:alanine symporter family protein 0.88 IAI46_22700 ribonuclease G low > 86
Vibrio cholerae E7946 ATCC 55056 0.53 CSW01_11935 sodium:alanine symporter family protein 0.80 CSW01_02205 ribonuclease E/G low > 62
Shewanella amazonensis SB2B 0.48 Sama_0916 sodium:alanine symporter family protein (RefSeq) 0.71 Sama_0471 ribonuclease G (RefSeq) low > 62
Shewanella oneidensis MR-1 0.47 SO3541 sodium:alanine symporter family protein (NCBI ptt file) 0.71 SO4094 cafA ribonuclease G (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.47 Shewana3_3144 amino acid carrier protein (RefSeq) 0.71 Shewana3_3644 ribonuclease G (RefSeq) low > 73
Shewanella loihica PV-4 0.42 Shew_1092 amino acid carrier protein (RefSeq) 0.71 Shew_0407 ribonuclease G (RefSeq) low > 60
Rahnella sp. WP5 0.41 EX31_RS03925 alanine:cation symporter family protein 0.88 EX31_RS12255 ribonuclease G low > 89
Alteromonas macleodii MIT1002 0.41 MIT1002_01494 Amino-acid carrier protein AlsT 0.72 MIT1002_00224 Ribonuclease G low > 70
Pseudomonas syringae pv. syringae B728a 0.41 Psyr_5052 Sodium:alanine symporter 0.55 Psyr_4159 RNAse G low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.41 Psyr_5052 Sodium:alanine symporter 0.55 Psyr_4159 RNAse G 0.45 75
Pseudomonas stutzeri RCH2 0.39 Psest_4077 amino acid carrier protein 0.56 Psest_3323 ribonuclease, Rne/Rng family low > 67
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_2024 sodium/alanine transporter 0.55 Pf1N1B4_1095 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) low > 87
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_4086 sodium/alanine transporter 0.55 Pf6N2E2_3283 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) low > 103
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_11095 sodium:alanine symporter 0.55 AO356_07110 ribonuclease G 0.17 88
Pseudomonas sp. RS175 0.39 PFR28_04500 Amino-acid carrier protein AlsT 0.55 PFR28_00158 Ribonuclease G 0.19 65
Acinetobacter radioresistens SK82 0.38 MPMX26_00623 Amino-acid carrier protein AlsT 0.52 MPMX26_00646 Ribonuclease G low > 36
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_09955 sodium:alanine symporter 0.55 AO353_05230 ribonuclease G 0.22 22
Pseudomonas simiae WCS417 0.38 PS417_28135 sodium:alanine symporter 0.55 PS417_04270 ribonuclease G low > 88
Pseudomonas fluorescens SBW25 0.38 PFLU_RS29820 alanine:cation symporter family protein 0.55 PFLU_RS04325 ribonuclease G low > 109
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS29820 alanine:cation symporter family protein 0.55 PFLU_RS04325 ribonuclease G 0.26 35
Pseudomonas fluorescens GW456-L13 0.38 PfGW456L13_741 sodium/alanine transporter 0.55 PfGW456L13_5029 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) low > 87
Pseudomonas putida KT2440 0.37 PP_0496 Sodium/alanine symporter 0.55 PP_0937 endoribonuclease G (RNAse G) low > 96
Fusobacterium nucleatum SB010 0.35 HUW76_08215 alanine:cation symporter family protein 0.23 HUW76_02260 ribonuclease E/G low > 35
Pseudomonas sp. S08-1 0.33 OH686_13280 Probable AGCS sodium/alanine/glycine symporter 0.55 OH686_08595 Ribonuclease G low > 80
Pontibacter actiniarum KMM 6156, DSM 19842 0.32 CA264_03595 sodium:alanine symporter 0.28 CA264_14980 ribonuclease E/G — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.31 Echvi_3279 amino acid carrier protein 0.27 Echvi_1251 ribonuclease, Rne/Rng family — —
Xanthomonas campestris pv. campestris strain 8004 0.31 Xcc-8004.1265.1 sodium/alanine symporter family protein 0.53 Xcc-8004.1880.1 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) low > 74
Marinobacter adhaerens HP15 0.24 HP15_3907 sodium/alanine symporter family protein 0.57 HP15_2451 ribonuclease, Rne/Rng family 0.34 8
Castellaniella sp019104865 MT123 0.22 ABCV34_RS11085 sodium:alanine symporter family protein 0.51 ABCV34_RS02480 ribonuclease G low > 48
Paraburkholderia sabiae LMG 24235 0.18 QEN71_RS14800 amino acid carrier protein 0.57 QEN71_RS24430 ribonuclease G low > 153

Not shown: 10 genomes with orthologs for GFF1082 only; 30 genomes with orthologs for GFF2138 only