Conservation of cofitness between Psest_0239 and Psest_2160 in Pseudomonas stutzeri RCH2

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_0239 formamidopyrimidine-DNA glycosylase (fpg) 1.0 Psest_2160 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes 0.28 4
Pseudomonas sp. RS175 0.82 PFR28_04272 Formamidopyrimidine-DNA glycosylase 0.56 PFR28_03966 Cardiolipin synthase B low > 88
Pseudomonas fluorescens FW300-N1B4 0.82 Pf1N1B4_2309 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) 0.54 Pf1N1B4_2630 Cardiolipin synthetase (EC 2.7.8.-) low > 87
Pseudomonas fluorescens GW456-L13 0.81 PfGW456L13_979 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) 0.54 PfGW456L13_1294 Cardiolipin synthetase (EC 2.7.8.-) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.81 Psyr_4761 DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase 0.53 Psyr_3277 Phospholipase D/Transphosphatidylase low > 86
Pseudomonas syringae pv. syringae B728a 0.81 Psyr_4761 DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase 0.53 Psyr_3277 Phospholipase D/Transphosphatidylase low > 86
Pseudomonas fluorescens FW300-N2E2 0.77 Pf6N2E2_4569 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) 0.57 Pf6N2E2_4901 Cardiolipin synthetase (EC 2.7.8.-) low > 103
Pseudomonas fluorescens SBW25 0.77 PFLU_RS28515 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.56 PFLU_RS26975 cardiolipin synthase ClsB low > 109
Pseudomonas sp. S08-1 0.77 OH686_14125 DNA-formamidopyrimidine glycosylase 0.61 OH686_01330 Cardiolipin synthase bacterial type ClsB, has minor trans-phosphatidylation activity converting PE to PG low > 80
Pseudomonas fluorescens FW300-N2C3 0.77 AO356_13270 5-hydroxymethyluracil DNA glycosylase 0.58 AO356_14845 cardiolipin synthase 2 low > 104
Pseudomonas fluorescens SBW25-INTG 0.77 PFLU_RS28515 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.56 PFLU_RS26975 cardiolipin synthase ClsB low > 109
Pseudomonas putida KT2440 0.77 PP_5125 Formamidopyrimidine-DNA glycosylase 0.57 PP_3264 cardiolipin synthase 2 low > 96
Pseudomonas simiae WCS417 0.77 PS417_26870 5-hydroxymethyluracil DNA glycosylase 0.56 PS417_25335 cardiolipin synthase 2 low > 88
Lysobacter sp. OAE881 0.60 ABIE51_RS00335 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.48 ABIE51_RS01410 cardiolipin synthase ClsB low > 62
Xanthomonas campestris pv. campestris strain 8004 0.59 Xcc-8004.5281.1 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) 0.40 Xcc-8004.373.1 Cardiolipin synthetase (EC 2.7.8.-) low > 74
Rahnella sp. WP5 0.58 EX31_RS14455 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.54 EX31_RS02840 cardiolipin synthase ClsB low > 89
Escherichia coli ECRC99 0.58 KEDOAH_12515 Formamidopyrimidine-DNA glycosylase 0.53 KEDOAH_21580 clsB cardiolipin synthase ClsB — —
Pantoea sp. MT58 0.58 IAI47_00635 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.55 IAI47_13450 cardiolipin synthase ClsB low > 76
Escherichia fergusonii Becca 0.58 EFB2_00178 Formamidopyrimidine-DNA glycosylase 0.54 EFB2_03316 Cardiolipin synthase B low > 86
Escherichia coli ECRC102 0.58 NIAGMN_13395 Formamidopyrimidine-DNA glycosylase 0.53 NIAGMN_04375 clsB cardiolipin synthase ClsB — —
Escherichia coli ECRC101 0.58 MCAODC_06145 Formamidopyrimidine-DNA glycosylase 0.53 MCAODC_25545 clsB cardiolipin synthase ClsB — —
Escherichia coli ECRC98 0.58 JDDGAC_19260 Formamidopyrimidine-DNA glycosylase 0.53 JDDGAC_09965 clsB cardiolipin synthase ClsB — —
Escherichia coli Nissle 1917 0.58 ECOLIN_RS20715 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.52 ECOLIN_RS04205 cardiolipin synthase ClsB — —
Escherichia coli ECRC101 0.58 OKFHMN_15635 Formamidopyrimidine-DNA glycosylase 0.53 OKFHMN_06330 clsB cardiolipin synthase ClsB — —
Dickeya dadantii 3937 0.58 DDA3937_RS20500 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.51 DDA3937_RS08615 cardiolipin synthase ClsB low > 74
Escherichia coli ECRC62 0.58 BNILDI_04000 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.53 BNILDI_20965 clsB cardiolipin synthase ClsB — —
Dickeya dianthicola 67-19 0.58 HGI48_RS00715 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.50 HGI48_RS08755 cardiolipin synthase ClsB low > 71
Escherichia coli BW25113 0.58 b3635 mutM formamidopyrimidine-DNA glycosylase (NCBI) 0.53 b0789 ybhO cardiolipin synthase 2 (NCBI) low > 76
Escherichia coli BL21 0.58 ECD_03492 formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase 0.52 ECD_00756 cardiolipin synthase 2 low > 60
Dickeya dianthicola ME23 0.58 DZA65_RS00770 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.51 DZA65_RS09045 cardiolipin synthase ClsB low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.58 OHPLBJKB_00067 Formamidopyrimidine-DNA glycosylase 0.52 OHPLBJKB_02924 Cardiolipin synthase B low > 73
Escherichia coli ECOR38 0.58 HEPCGN_14460 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.53 HEPCGN_01710 clsB cardiolipin synthase ClsB low > 85
Escherichia coli ECOR27 0.57 NOLOHH_07515 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.53 NOLOHH_22685 clsB cardiolipin synthase ClsB low > 57
Klebsiella michiganensis M5al 0.57 BWI76_RS27330 DNA-formamidopyrimidine glycosylase 0.54 BWI76_RS08850 cardiolipin synthase B low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.57 GFF374 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) 0.55 GFF688 Cardiolipin synthetase (EC 2.7.8.-) low > 78
Enterobacter sp. TBS_079 0.56 MPMX20_00100 Formamidopyrimidine-DNA glycosylase 0.52 MPMX20_01417 Cardiolipin synthase B low > 85
Enterobacter asburiae PDN3 0.55 EX28DRAFT_3885 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) 0.52 EX28DRAFT_2202 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes low > 76
Herbaspirillum seropedicae SmR1 0.52 HSERO_RS19545 formamidopyrimidine-DNA glycosylase 0.22 HSERO_RS01175 cardiolipin synthase low > 78
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS01720 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.24 QEN71_RS02050 cardiolipin synthase ClsB low > 153
Ralstonia solanacearum GMI1000 0.50 RS_RS01975 formamidopyrimidine-DNA glycosylase 0.24 RS_RS02330 cardiolipin synthase ClsB low > 80
Ralstonia solanacearum PSI07 0.49 RPSI07_RS22175 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.24 RPSI07_RS21710 cardiolipin synthase ClsB low > 81
Ralstonia solanacearum UW163 0.49 UW163_RS02455 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.26 UW163_RS02085 cardiolipin synthase ClsB — —
Ralstonia solanacearum IBSBF1503 0.49 RALBFv3_RS11125 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.26 RALBFv3_RS11500 cardiolipin synthase ClsB low > 76
Variovorax sp. SCN45 0.47 GFF2353 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) 0.56 GFF3294 Cardiolipin synthase (EC 2.7.8.-) bacterial type ClsB, has minor trans-phosphatidylation activity converting PE to PG low > 127
Ralstonia sp. UNC404CL21Col 0.46 ABZR87_RS07015 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.23 ABZR87_RS07460 cardiolipin synthase ClsB low > 80
Dechlorosoma suillum PS 0.44 Dsui_1031 formamidopyrimidine-DNA glycosylase Fpg 0.27 Dsui_1041 phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase low > 51
Variovorax sp. OAS795 0.41 ABID97_RS23725 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.55 ABID97_RS02725 cardiolipin synthase ClsB low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.39 GFF825 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) 0.48 GFF5688 Cardiolipin synthetase (EC 2.7.8.-) low > 90
Sphingomonas koreensis DSMZ 15582 0.38 Ga0059261_3586 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) 0.16 Ga0059261_1924 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes low > 68

Not shown: 39 genomes with orthologs for Psest_0239 only; 1 genomes with orthologs for Psest_2160 only