Conservation of cofitness between Psest_1819 and Psest_2066 in Pseudomonas stutzeri RCH2

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_1819 Nucleoside-diphosphate-sugar epimerases 1.0 Psest_2066 ABC-type uncharacterized transport system, permease component 0.39 17
Pseudomonas fluorescens SBW25 0.76 PFLU_RS17885 GDP-L-fucose synthase 0.89 PFLU_RS12890 microcin C ABC transporter permease YejB low > 109
Pseudomonas fluorescens SBW25-INTG 0.76 PFLU_RS17885 GDP-L-fucose synthase 0.89 PFLU_RS12890 microcin C ABC transporter permease YejB low > 109
Enterobacter sp. TBS_079 0.71 MPMX20_03034 GDP-L-fucose synthase 0.65 MPMX20_03144 Inner membrane ABC transporter permease protein YejB low > 85
Enterobacter asburiae PDN3 0.70 EX28DRAFT_0503 Nucleoside-diphosphate-sugar epimerases 0.65 EX28DRAFT_0383 ABC-type uncharacterized transport system, permease component low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.70 GFF3876 GDP-L-fucose synthetase (EC 1.1.1.271) 0.66 GFF3758 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) low > 78
Escherichia coli Nissle 1917 0.70 ECOLIN_RS12090 GDP-L-fucose synthase 0.66 ECOLIN_RS12735 microcin C ABC transporter permease YejB — —
Escherichia coli ECOR38 0.70 HEPCGN_03050 fcl GDP-L-fucose synthase 0.66 HEPCGN_22650 yejB Inner membrane ABC transporter permease protein YejB low > 85
Escherichia coli ECRC101 0.70 MCAODC_20590 fcl GDP-L-fucose synthase 0.66 MCAODC_14435 yejB Inner membrane ABC transporter permease protein YejB — —
Escherichia coli ECRC98 0.70 JDDGAC_28460 fcl GDP-L-fucose synthase 0.66 JDDGAC_27345 yejB Inner membrane ABC transporter permease protein YejB — —
Escherichia coli ECRC102 0.70 NIAGMN_22295 fcl GDP-L-fucose synthase 0.66 NIAGMN_21150 yejB Inner membrane ABC transporter permease protein YejB — —
Escherichia coli ECOR27 0.70 NOLOHH_15680 fcl GDP-L-fucose synthase 0.66 NOLOHH_14960 yejB Inner membrane ABC transporter permease protein YejB — —
Escherichia coli ECRC101 0.70 OKFHMN_24350 fcl GDP-L-fucose synthase 0.66 OKFHMN_23385 yejB Inner membrane ABC transporter permease protein YejB — —
Escherichia fergusonii Becca 0.70 EFB2_01802 GDP-L-fucose synthase 0.66 EFB2_01678 Inner membrane ABC transporter permease protein YejB low > 86
Escherichia coli ECRC99 0.70 KEDOAH_03800 fcl GDP-L-fucose synthase 0.66 KEDOAH_04800 yejB Inner membrane ABC transporter permease protein YejB — —
Escherichia coli BW25113 0.70 b2052 fcl bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase (NCBI) 0.66 b2178 yejB predicted oligopeptide transporter subunit (NCBI) low > 76
Escherichia coli ECRC62 0.70 BNILDI_14590 fcl GDP-L-fucose synthase 0.66 BNILDI_13880 yejB Inner membrane ABC transporter permease protein YejB — —
Escherichia coli BL21 0.70 ECD_01958 bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase 0.66 ECD_02108 microcin C ABC transporter permease low > 60
Pectobacterium carotovorum WPP14 0.68 HER17_RS14535 GDP-L-fucose synthase 0.67 HER17_RS12925 microcin C ABC transporter permease YejB low > 75
Dechlorosoma suillum PS 0.64 Dsui_0086 nucleoside-diphosphate-sugar epimerase 0.16 Dsui_0412 ABC-type dipeptide/oligopeptide/nickel transport system, permease component low > 51
Hydrogenophaga sp. GW460-11-11-14-LB1 0.64 GFF2555 GDP-L-fucose synthetase (EC 1.1.1.271) 0.54 GFF4336 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) low > 90
Castellaniella sp019104865 MT123 0.64 ABCV34_RS12930 GDP-L-fucose synthase 0.17 ABCV34_RS13520 glutathione ABC transporter permease GsiC — —
Phaeobacter inhibens DSM 17395 0.59 PGA1_65p00300 GDP-L-fucose synthetase Fcl 0.69 PGA1_c30170 ABC transporter permease protein — —
Cupriavidus basilensis FW507-4G11 0.58 RR42_RS33240 GDP-L-fucose synthase 0.59 RR42_RS13380 microcin ABC transporter permease low > 128
Variovorax sp. OAS795 0.57 ABID97_RS19130 GDP-L-fucose synthase 0.62 ABID97_RS16515 ABC transporter permease subunit low > 91
Variovorax sp. SCN45 0.55 GFF60 GDP-L-fucose synthetase (EC 1.1.1.271) 0.59 GFF228 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) low > 127
Burkholderia phytofirmans PsJN 0.55 BPHYT_RS04005 GDP-L-fucose synthase 0.57 BPHYT_RS12380 ABC transporter permease low > 109
Paraburkholderia graminis OAS925 0.54 ABIE53_000941 GDP-L-fucose synthase 0.57 ABIE53_002549 microcin C transport system permease protein low > 113
Paraburkholderia bryophila 376MFSha3.1 0.54 H281DRAFT_04777 GDP-L-fucose synthase 0.57 H281DRAFT_00561 microcin C transport system permease protein low > 103
Desulfovibrio vulgaris Hildenborough JW710 0.53 DVU0090 wcaG GDP-fucose synthetase (TIGR) 0.56 DVU2385 ABC transporter, permease protein (TIGR) — —
Pedobacter sp. GW460-11-11-14-LB5 0.53 CA265_RS19675 GDP-fucose synthetase 0.16 CA265_RS25300 ABC transporter permease low > 88
Desulfovibrio vulgaris Miyazaki F 0.53 DvMF_2695 NAD-dependent epimerase/dehydratase (RefSeq) 0.26 DvMF_0920 binding-protein-dependent transport systems inner membrane component (RefSeq) low > 51
Magnetospirillum magneticum AMB-1 0.52 AMB_RS00820 GDP-L-fucose synthase 0.68 AMB_RS22195 microcin C ABC transporter permease YejB — —
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS26355 GDP-L-fucose synthase 0.57 QEN71_RS06175 ABC transporter permease subunit low > 153
Azospirillum sp. SherDot2 0.51 MPMX19_05629 GDP-L-fucose synthase 0.72 MPMX19_02169 Inner membrane ABC transporter permease protein YejB low > 112
Azospirillum brasilense Sp245 0.51 AZOBR_RS03370 GDP-L-fucose synthase 0.71 AZOBR_RS03820 microcin C ABC transporter permease YejB low > 97
Rhodospirillum rubrum S1H 0.50 Rru_A0254 NAD-dependent epimerase/dehydratase (NCBI) 0.63 Rru_A3167 Binding-protein-dependent transport systems inner membrane component (NCBI) low > 58
Dinoroseobacter shibae DFL-12 0.50 Dshi_4142 NAD-dependent epimerase/dehydratase (RefSeq) 0.65 Dshi_0656 binding-protein-dependent transport systems inner membrane component (RefSeq) low > 64
Agrobacterium fabrum C58 0.47 Atu4790 GDP-fucose synthetase 0.68 Atu0188 ABC transporter, membrane spanning protein (peptide) low > 89
Mycobacterium tuberculosis H37Rv 0.45 Rv1512 Probable nucleotide-sugar epimerase EpiA 0.14 Rv3665c Probable dipeptide-transport integral membrane protein ABC transporter DppB — —
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS22065 EpiA 0.62 HSERO_RS17140 ABC transporter permease low > 78
Dickeya dadantii 3937 0.24 DDA3937_RS18680 GDP-L-fucose synthase 0.67 DDA3937_RS09185 microcin C ABC transporter permease YejB low > 74
Dickeya dianthicola 67-19 0.24 HGI48_RS18610 GDP-L-fucose synthase 0.67 HGI48_RS09225 microcin C ABC transporter permease YejB low > 71
Dickeya dianthicola ME23 0.24 DZA65_RS19745 GDP-L-fucose synthase 0.67 DZA65_RS09530 microcin C ABC transporter permease YejB low > 75

Not shown: 14 genomes with orthologs for Psest_1819 only; 35 genomes with orthologs for Psest_2066 only