Conservation of cofitness between Psest_0206 and Psest_0203 in Pseudomonas stutzeri RCH2

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_0206 Uncharacterized protein conserved in bacteria 1.0 Psest_0203 Signal transduction histidine kinase 0.79 1
Pseudomonas sp. S08-1 0.87 OH686_19995 Tripartite tricarboxylate transporter TctC family 0.68 OH686_20010 Tricarboxylate transport sensor protein TctE 0.99 1
Pseudomonas syringae pv. syringae B728a ΔmexB 0.72 Psyr_3966 Uncharacterized protein UPF0065 0.67 Psyr_3964 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal low > 86
Pseudomonas sp. RS175 0.72 PFR28_00681 hypothetical protein 0.69 PFR28_00684 Sensor protein QseC 0.93 3
Pseudomonas syringae pv. syringae B728a 0.72 Psyr_3966 Uncharacterized protein UPF0065 0.67 Psyr_3964 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal 0.58 3
Pseudomonas fluorescens FW300-N2E2 0.71 Pf6N2E2_2768 Tricarboxylate transport protein TctC 0.68 Pf6N2E2_2764 Tricarboxylate transport sensor protein TctE 0.56 2
Pseudomonas fluorescens SBW25 0.71 PFLU_RS07150 tripartite tricarboxylate transporter substrate binding protein 0.68 PFLU_RS07165 sensor histidine kinase 0.97 1
Pseudomonas fluorescens SBW25-INTG 0.71 PFLU_RS07150 tripartite tricarboxylate transporter substrate binding protein 0.68 PFLU_RS07165 sensor histidine kinase 0.88 1
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_04615 tricarboxylic transporter 0.68 AO356_04605 histidine kinase low > 104
Pseudomonas sp. DMC3 0.71 GFF2270 hypothetical protein 0.69 GFF2272 Adaptive-response sensory-kinase SasA 0.76 6
Pseudomonas fluorescens FW300-N1B4 0.71 Pf1N1B4_3313 Tricarboxylate transport protein TctC 0.70 Pf1N1B4_3317 Tricarboxylate transport sensor protein TctE low > 87
Pseudomonas sp. SVBP6 0.71 COO64_RS16480 tripartite tricarboxylate transporter substrate binding protein 0.72 COO64_RS16495 sensor histidine kinase low > 93
Pseudomonas simiae WCS417 0.71 PS417_07075 tricarboxylic transport membrane protein 0.69 PS417_07090 histidine kinase 0.88 1
Pseudomonas fluorescens FW300-N2E3 0.70 AO353_17580 tricarboxylic transporter 0.67 AO353_17595 histidine kinase 0.88 1
Pseudomonas fluorescens GW456-L13 0.70 PfGW456L13_4526 Tricarboxylate transport protein TctC 0.70 PfGW456L13_4523 Tricarboxylate transport sensor protein TctE 0.68 21
Pseudomonas lactucae CFBP13502 0.70 GEMAOFIL_01563 hypothetical protein 0.69 GEMAOFIL_01566 Sensor protein QseC low > 93
Pseudomonas putida KT2440 0.69 PP_1418 putative Tricarboxylate transport protein TctC 0.71 PP_1421 putative Sensor histidine kinase TctE 0.92 2
Pseudomonas sp. BP01 0.69 JOY50_RS14620 tripartite tricarboxylate transporter substrate binding protein 0.71 JOY50_RS14635 sensor histidine kinase low > 84
Pseudomonas aeruginosa PA14 0.67 IKLFDK_03220 tricarboxylic transporter 0.69 IKLFDK_03235 histidine kinase low > 100
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.63 GFF1560 Tricarboxylate transport protein TctC 0.30 GFF1557 Tricarboxylate transport sensor protein TctE low > 78
Dickeya dianthicola ME23 0.63 DZA65_RS15395 tripartite tricarboxylate transporter substrate binding protein 0.32 DZA65_RS15385 sensor histidine kinase low > 75
Dickeya dianthicola 67-19 0.63 HGI48_RS14460 tripartite tricarboxylate transporter substrate binding protein 0.33 HGI48_RS14450 sensor histidine kinase N-terminal domain-containing protein low > 71
Pantoea agglomerans CFBP13505 P0401 0.63 PagCFBP13505_RS00165 tripartite tricarboxylate transporter substrate binding protein 0.30 PagCFBP13505_RS00175 sensor histidine kinase low > 74
Dickeya dadantii 3937 0.63 DDA3937_RS14490 tripartite tricarboxylate transporter substrate binding protein 0.33 DDA3937_RS14480 sensor histidine kinase low > 74
Klebsiella michiganensis M5al 0.63 BWI76_RS20035 hypothetical protein 0.31 BWI76_RS20025 HAMP domain-containing histidine kinase low > 92
Pantoea sp. MT58 0.63 IAI47_06210 tripartite tricarboxylate transporter substrate binding protein 0.30 IAI47_06220 sensor histidine kinase 0.61 3
Serratia liquefaciens MT49 0.62 IAI46_17880 tripartite tricarboxylate transporter substrate binding protein 0.34 IAI46_17865 sensor histidine kinase N-terminal domain-containing protein low > 86
Enterobacter sp. TBS_079 0.61 MPMX20_03193 hypothetical protein 0.31 MPMX20_03191 Sensor protein QseC low > 85
Hydrogenophaga sp. GW460-11-11-14-LB1 0.59 GFF3029 Tricarboxylate transport protein TctC 0.26 GFF5131 Tricarboxylate transport sensor protein TctE low > 90
Cupriavidus basilensis FW507-4G11 0.57 RR42_RS03285 tricarboxylic transport membrane protein 0.36 RR42_RS03295 histidine kinase 0.40 61
Acidovorax sp. GW101-3H11 0.47 Ac3H11_112 Tricarboxylate transport protein TctC 0.28 Ac3H11_57 Tricarboxylate transport sensor protein TctE low > 79
Herbaspirillum seropedicae SmR1 0.46 HSERO_RS22660 tricarboxylate transporter 0.43 HSERO_RS22670 histidine kinase low > 78
Variovorax sp. SCN45 0.43 GFF2606 Tripartite tricarboxylate transporter TctC family 0.29 GFF527 Tricarboxylate transport sensor protein TctE low > 127
Variovorax sp. OAS795 0.41 ABID97_RS19745 tripartite tricarboxylate transporter substrate-binding protein 0.31 ABID97_RS17745 sensor histidine kinase — —
Rhizobium sp. OAE497 0.22 ABIE40_RS16420 tripartite tricarboxylate transporter substrate binding protein 0.27 ABIE40_RS23400 sensor histidine kinase low > 107
Burkholderia phytofirmans PsJN 0.21 BPHYT_RS11030 transporter 0.24 BPHYT_RS16370 histidine kinase — —
Agrobacterium fabrum C58 0.21 Atu2469 hypothetical protein 0.24 Atu2465 two component sensor kinase low > 89
Sinorhizobium meliloti 1021 0.19 SM_b20724 hypothetical protein 0.24 SM_b20721 two-component sensor histidine kinase low > 103
Phaeobacter inhibens DSM 17395 0.18 PGA1_c07940 Uncharacterized protein conserved in bacteria 0.21 PGA1_c07920 signal transduction histidine kinase 0.71 3
Dinoroseobacter shibae DFL-12 0.17 Dshi_3123 Tricarboxylate transport protein TctC (from data) 0.20 Dshi_3125 integral membrane sensor signal transduction histidine kinase (RefSeq) 0.88 3
Xanthobacter sp. DMC5 0.16 GFF2530 hypothetical protein 0.26 GFF454 Sensor protein QseC — —

Not shown: 4 genomes with orthologs for Psest_0206 only; 19 genomes with orthologs for Psest_0203 only