Conservation of cofitness between GFF1735 and GFF2016 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF1735 Phosphate transport system permease protein PstC (TC 3.A.1.7.1) 1.0 GFF2016 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) 0.77 2
Escherichia coli ECOR27 0.98 NOLOHH_07015 pstC phosphate ABC transporter permease PstC 0.88 NOLOHH_04715 dsbD protein-disulfide reductase DsbD 0.51 66
Escherichia coli ECRC98 0.98 JDDGAC_18505 pstC phosphate ABC transporter permease PstC 0.87 JDDGAC_16085 dsbD protein-disulfide reductase DsbD low > 86
Escherichia coli ECRC100 0.98 OKFHMN_14885 pstC phosphate ABC transporter permease PstC 0.87 OKFHMN_12450 dsbD protein-disulfide reductase DsbD low > 80
Escherichia coli Nissle 1917 0.98 ECOLIN_RS21445 phosphate ABC transporter permease PstC 0.88 ECOLIN_RS24030 protein-disulfide reductase DsbD low > 55
Escherichia coli ECRC101 0.98 MCAODC_05390 pstC phosphate ABC transporter permease PstC 0.87 MCAODC_02960 dsbD protein-disulfide reductase DsbD low > 87
Escherichia coli BL21 0.98 ECD_03611 phosphate ABC transporter permease 0.88 ECD_04006 thiol:disulfide interchange protein and activator of DsbC low > 61
Escherichia coli ECRC99 0.98 KEDOAH_13265 pstC phosphate ABC transporter permease PstC 0.87 KEDOAH_15715 dsbD protein-disulfide reductase DsbD — —
Escherichia fergusonii Becca 0.98 EFB2_04906 Phosphate transport system permease protein PstC 0.88 EFB2_04399 Thiol:disulfide interchange protein DsbD low > 86
Escherichia coli ECOR38 0.98 HEPCGN_13595 pstC phosphate ABC transporter permease PstC 0.87 HEPCGN_10675 dsbD protein-disulfide reductase DsbD low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.98 OHPLBJKB_04326 Phosphate transport system permease protein PstC 0.88 OHPLBJKB_03907 Thiol:disulfide interchange protein DsbD low > 73
Escherichia coli ECRC62 0.98 BNILDI_04510 pstC phosphate ABC transporter permease PstC 0.88 BNILDI_06775 dsbD protein-disulfide reductase DsbD low > 75
Escherichia coli ECRC102 0.98 NIAGMN_12640 pstC phosphate ABC transporter permease PstC 0.87 NIAGMN_10295 dsbD protein-disulfide reductase DsbD — —
Escherichia coli BW25113 0.98 b3727 pstC phosphate transporter subunit (NCBI) 0.88 b4136 dipZ thiol:disulfide interchange protein precursor (NCBI) low > 76
Klebsiella michiganensis M5al 0.97 BWI76_RS00155 phosphate transporter permease subunit PstC 0.81 BWI76_RS02315 protein-disulfide reductase DsbD — —
Enterobacter asburiae PDN3 0.93 EX28DRAFT_4003 phosphate ABC transporter, permease protein PstC 0.85 EX28DRAFT_3333 Thiol:disulfide interchange protein low > 76
Enterobacter sp. TBS_079 0.93 MPMX20_04640 Phosphate transport system permease protein PstC 0.83 MPMX20_00416 Thiol:disulfide interchange protein DsbD low > 85
Pantoea sp. MT58 0.90 IAI47_00230 phosphate ABC transporter permease PstC 0.63 IAI47_17335 protein-disulfide reductase DsbD low > 76
Rahnella sp. WP5 0.87 EX31_RS06065 phosphate ABC transporter permease PstC 0.62 EX31_RS08975 protein-disulfide reductase DsbD low > 89
Pectobacterium carotovorum WPP14 0.85 HER17_RS21680 phosphate ABC transporter permease PstC 0.63 HER17_RS18850 protein-disulfide reductase DsbD low > 75
Erwinia tracheiphila SCR3 0.85 LU632_RS24885 pstC phosphate ABC transporter permease PstC 0.60 LU632_RS01840 protein-disulfide reductase DsbD low > 74
Serratia liquefaciens MT49 0.85 IAI46_25180 phosphate ABC transporter permease PstC 0.67 IAI46_01465 protein-disulfide reductase DsbD low > 86
Dickeya dianthicola ME23 0.82 DZA65_RS22545 phosphate ABC transporter permease PstC 0.60 DZA65_RS02835 protein-disulfide reductase DsbD low > 75
Dickeya dadantii 3937 0.82 DDA3937_RS21465 phosphate ABC transporter permease PstC 0.61 DDA3937_RS02705 protein-disulfide reductase DsbD low > 74
Dickeya dianthicola 67-19 0.82 HGI48_RS21565 phosphate ABC transporter permease PstC 0.60 HGI48_RS02680 protein-disulfide reductase DsbD low > 71
Paraburkholderia sabiae LMG 24235 0.76 QEN71_RS04825 phosphate ABC transporter permease PstC 0.27 QEN71_RS28120 protein-disulfide reductase DsbD — —
Paraburkholderia graminis OAS925 0.76 ABIE53_002994 phosphate transport system permease protein 0.28 ABIE53_000167 thiol:disulfide interchange protein DsbD low > 113
Cupriavidus basilensis FW507-4G11 0.75 RR42_RS13465 phosphate transporter permease subunit PstC 0.29 RR42_RS19110 thiol:disulfide interchange protein — —
Ralstonia solanacearum UW163 0.75 UW163_RS15455 phosphate transporter permease subunit PstC 0.29 UW163_RS06570 protein-disulfide reductase DsbD — —
Paraburkholderia bryophila 376MFSha3.1 0.75 H281DRAFT_04412 phosphate ABC transporter membrane protein 1, PhoT family 0.28 H281DRAFT_05598 thiol:disulfide interchange protein DsbD — —
Ralstonia solanacearum IBSBF1503 0.75 RALBFv3_RS02145 phosphate transporter permease subunit PstC 0.29 RALBFv3_RS07045 protein-disulfide reductase DsbD — —
Ralstonia solanacearum PSI07 0.75 RPSI07_RS15300 phosphate ABC transporter permease subunit PstC 0.30 RPSI07_RS10195 protein-disulfide reductase DsbD low > 81
Ralstonia solanacearum GMI1000 0.75 RS_RS07675 phosphate ABC transporter permease subunit PstC 0.29 RS_RS14985 thiol:disulfide interchange protein DsbD — —
Burkholderia phytofirmans PsJN 0.74 BPHYT_RS14140 phosphate transporter permease subunit PstC 0.27 BPHYT_RS17970 thiol:disulfide interchange protein — —
Ralstonia sp. UNC404CL21Col 0.72 ABZR87_RS14095 phosphate ABC transporter permease PstC 0.30 ABZR87_RS02695 protein-disulfide reductase DsbD — —
Herbaspirillum seropedicae SmR1 0.61 HSERO_RS06315 phosphate ABC transporter permease 0.31 HSERO_RS00715 thiol:disulfide interchange protein — —
Castellaniella sp019104865 MT123 0.56 ABCV34_RS15590 phosphate ABC transporter permease subunit PstC 0.30 ABCV34_RS03205 protein-disulfide reductase DsbD — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.53 Psyr_3105 phosphate ABC transporter membrane protein 1, PhoT family 0.26 Psyr_4398 Protein-disulfide reductase — —
Pseudomonas syringae pv. syringae B728a 0.53 Psyr_3105 phosphate ABC transporter membrane protein 1, PhoT family 0.26 Psyr_4398 Protein-disulfide reductase — —
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS16165 phosphate ABC transporter permease subunit PstC 0.28 PFLU_RS21490 protein-disulfide reductase DsbD — —
Pseudomonas putida KT2440 0.28 PP_2657 phosphate ABC transporter 0.26 PP_0561 thiol/disulfide interchange protein 1 low > 96
Pseudomonas fluorescens SBW25 0.28 PFLU_RS16165 phosphate ABC transporter permease subunit PstC 0.28 PFLU_RS21490 protein-disulfide reductase DsbD — —
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_26695 phosphate ABC transporter permease 0.30 AO356_02870 thiol:disulfide interchange protein — —
Pseudomonas simiae WCS417 0.28 PS417_14265 phosphate ABC transporter permease 0.28 PS417_19525 thiol:disulfide interchange protein — —
Shewanella oneidensis MR-1 0.23 SO4291 pstC phosphate ABC transporter, permease protein (NCBI ptt file) 0.43 SO0696 dsbD thiol:disulfide interchange protein DsbD (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.21 CSW01_14375 phosphate ABC transporter permease subunit PstC 0.48 CSW01_13635 thiol:disulfide interchange protein DsbD low > 62

Not shown: 21 genomes with orthologs for GFF1735 only; 15 genomes with orthologs for GFF2016 only